RNA–Protein interactions for RNA: ENST00000589426.5

PGS1-212, Transcript of phosphatidylglycerophosphate synthase 1, humanhuman

TSL 1 (best)

Gene PGS1, Length 2,033 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGS1-212ENST00000589426 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
PGS1-212ENST00000589426 CCDC180Q9P1Z9 1646 aa36.42■■■■□ 3.42
PGS1-212ENST00000589426 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
PGS1-212ENST00000589426 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
PGS1-212ENST00000589426 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
PGS1-212ENST00000589426 SHROOM4Q9ULL8 1493 aa34.56■■■■□ 3.12
PGS1-212ENST00000589426 ABCC9O60706 1549 aa34.3■■■■□ 3.08
PGS1-212ENST00000589426 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
PGS1-212ENST00000589426 NACADO15069 1562 aa33.89■■■■□ 3.02
PGS1-212ENST00000589426 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
PGS1-212ENST00000589426 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
PGS1-212ENST00000589426 SUPT5HO00267 1087 aaKnown RBP33.41■■■□□ 2.94
PGS1-212ENST00000589426 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
PGS1-212ENST00000589426 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
PGS1-212ENST00000589426 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
PGS1-212ENST00000589426 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
PGS1-212ENST00000589426 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
PGS1-212ENST00000589426 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
PGS1-212ENST00000589426 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
PGS1-212ENST00000589426 WIZO95785 1651 aa32.22■■■□□ 2.75
PGS1-212ENST00000589426 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
PGS1-212ENST00000589426 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
PGS1-212ENST00000589426 TOP2AP11388 1531 aaKnown RBP31.87■■■□□ 2.69
PGS1-212ENST00000589426 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
PGS1-212ENST00000589426 ATAD2BQ9ULI0 1458 aa31.64■■■□□ 2.66
PGS1-212ENST00000589426 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
PGS1-212ENST00000589426 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
PGS1-212ENST00000589426 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
PGS1-212ENST00000589426 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
PGS1-212ENST00000589426 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
PGS1-212ENST00000589426 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
PGS1-212ENST00000589426 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
PGS1-212ENST00000589426 ABCC8Q09428 1581 aa31.03■■■□□ 2.56
PGS1-212ENST00000589426 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
PGS1-212ENST00000589426 LOC105371045A0A1W2PR82 267 aa30.93■■■□□ 2.54
PGS1-212ENST00000589426 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
PGS1-212ENST00000589426 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.52
PGS1-212ENST00000589426 CFTRP13569 1480 aa30.7■■■□□ 2.51
PGS1-212ENST00000589426 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
PGS1-212ENST00000589426 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
PGS1-212ENST00000589426 SOGA1O94964 1423 aa30.53■■■□□ 2.48
PGS1-212ENST00000589426 EEA1Q15075 1411 aa30.48■■■□□ 2.47
PGS1-212ENST00000589426 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
PGS1-212ENST00000589426 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
PGS1-212ENST00000589426 EHMT2Q96KQ7 1210 aa30.42■■■□□ 2.46
PGS1-212ENST00000589426 BIVM-ERCC5R4GMW8 1640 aa30.42■■■□□ 2.46
PGS1-212ENST00000589426 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
PGS1-212ENST00000589426 CUX1P39880 1505 aa30.34■■■□□ 2.45
PGS1-212ENST00000589426 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
PGS1-212ENST00000589426 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
PGS1-212ENST00000589426 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
PGS1-212ENST00000589426 NESP48681 1621 aa30.2■■■□□ 2.43
PGS1-212ENST00000589426 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
PGS1-212ENST00000589426 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
PGS1-212ENST00000589426 TNIKQ9UKE5 1360 aa30.06■■■□□ 2.4
PGS1-212ENST00000589426 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
PGS1-212ENST00000589426 KIF21BO75037 1637 aa30.05■■■□□ 2.4
PGS1-212ENST00000589426 UBTFP17480 764 aaKnown RBP30■■■□□ 2.39
PGS1-212ENST00000589426 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
PGS1-212ENST00000589426 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
PGS1-212ENST00000589426 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
PGS1-212ENST00000589426 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
PGS1-212ENST00000589426 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
PGS1-212ENST00000589426 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
PGS1-212ENST00000589426 RAPGEF2Q9Y4G8 1499 aa29.88■■■□□ 2.37
PGS1-212ENST00000589426 CUX2O14529 1486 aa29.85■■■□□ 2.37
PGS1-212ENST00000589426 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
PGS1-212ENST00000589426 URB2Q14146 1524 aaKnown RBP29.82■■■□□ 2.36
PGS1-212ENST00000589426 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
PGS1-212ENST00000589426 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
PGS1-212ENST00000589426 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
PGS1-212ENST00000589426 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
PGS1-212ENST00000589426 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
PGS1-212ENST00000589426 IGF1RP08069 1367 aa29.71■■■□□ 2.35
PGS1-212ENST00000589426 TRIM26Q12899 539 aaPredicted RBP29.71■■■□□ 2.35
PGS1-212ENST00000589426 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
PGS1-212ENST00000589426 CLIP1P30622 1438 aa29.63■■■□□ 2.33
PGS1-212ENST00000589426 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
PGS1-212ENST00000589426 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
PGS1-212ENST00000589426 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
PGS1-212ENST00000589426 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
PGS1-212ENST00000589426 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
PGS1-212ENST00000589426 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
PGS1-212ENST00000589426 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
PGS1-212ENST00000589426 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
PGS1-212ENST00000589426 VPS8Q8N3P4 1428 aa29.4■■■□□ 2.3
PGS1-212ENST00000589426 CUL7Q14999 1698 aa29.38■■■□□ 2.29
PGS1-212ENST00000589426 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
PGS1-212ENST00000589426 WDR62O43379 1518 aa29.37■■■□□ 2.29
PGS1-212ENST00000589426 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
PGS1-212ENST00000589426 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
PGS1-212ENST00000589426 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
PGS1-212ENST00000589426 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
PGS1-212ENST00000589426 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
PGS1-212ENST00000589426 AQRO60306 1485 aaKnown RBP eCLIP29.18■■■□□ 2.268e-9■■■■■ 48.9
PGS1-212ENST00000589426 TTBK1Q5TCY1 1321 aaPredicted RBP29.17■■■□□ 2.26
PGS1-212ENST00000589426 APLP2Q06481 763 aa29.16■■■□□ 2.26
PGS1-212ENST00000589426 HRCP23327 699 aa29.15■■■□□ 2.26
PGS1-212ENST00000589426 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
PGS1-212ENST00000589426 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms