RNA–Protein interactions for RNA: ENST00000581642.1

SLC16A3-212, Transcript of solute carrier family 16 member 3, humanhuman

TSL 4

Gene SLC16A3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC16A3-212ENST00000581642 NISCHQ9Y2I1 1504 aa44.61■■■■■ 4.73
SLC16A3-212ENST00000581642 ABCC9O60706 1549 aa40.07■■■■■ 4.01
SLC16A3-212ENST00000581642 CCDC180Q9P1Z9 1646 aa39.96■■■■□ 3.99
SLC16A3-212ENST00000581642 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
SLC16A3-212ENST00000581642 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
SLC16A3-212ENST00000581642 NACADO15069 1562 aa37.76■■■■□ 3.63
SLC16A3-212ENST00000581642 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
SLC16A3-212ENST00000581642 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.57
SLC16A3-212ENST00000581642 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
SLC16A3-212ENST00000581642 MYO15BQ96JP2 1530 aa37.21■■■■□ 3.55
SLC16A3-212ENST00000581642 ZCCHC6Q5VYS8 1495 aaKnown RBP37.18■■■■□ 3.54
SLC16A3-212ENST00000581642 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
SLC16A3-212ENST00000581642 DCAF1Q9Y4B6 1507 aa36.97■■■■□ 3.51
SLC16A3-212ENST00000581642 SCRIBQ14160 1630 aa36.53■■■■□ 3.44
SLC16A3-212ENST00000581642 SHROOM4Q9ULL8 1493 aa36.32■■■■□ 3.41
SLC16A3-212ENST00000581642 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
SLC16A3-212ENST00000581642 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
SLC16A3-212ENST00000581642 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
SLC16A3-212ENST00000581642 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
SLC16A3-212ENST00000581642 ATAD2BQ9ULI0 1458 aa34.81■■■■□ 3.16
SLC16A3-212ENST00000581642 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
SLC16A3-212ENST00000581642 SMARCA2P51531 1590 aa34.66■■■■□ 3.14
SLC16A3-212ENST00000581642 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
SLC16A3-212ENST00000581642 HMGXB3Q12766 1538 aa34.61■■■■□ 3.13
SLC16A3-212ENST00000581642 ERCC6Q03468 1493 aa34.55■■■■□ 3.12
SLC16A3-212ENST00000581642 BAZ1BQ9UIG0 1483 aaKnown RBP34.48■■■■□ 3.11
SLC16A3-212ENST00000581642 NESP48681 1621 aa34.44■■■■□ 3.1
SLC16A3-212ENST00000581642 DNAJC5Q9H3Z4 198 aa34.42■■■■□ 3.1
SLC16A3-212ENST00000581642 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
SLC16A3-212ENST00000581642 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
SLC16A3-212ENST00000581642 CUX2O14529 1486 aa34.4■■■■□ 3.1
SLC16A3-212ENST00000581642 LAMC3Q9Y6N6 1575 aa34.09■■■■□ 3.05
SLC16A3-212ENST00000581642 WIZO95785 1651 aa34.03■■■■□ 3.04
SLC16A3-212ENST00000581642 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
SLC16A3-212ENST00000581642 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
SLC16A3-212ENST00000581642 PDS5BQ9NTI5 1447 aa33.89■■■■□ 3.02
SLC16A3-212ENST00000581642 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
SLC16A3-212ENST00000581642 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
SLC16A3-212ENST00000581642 TOP2AP11388 1531 aaKnown RBP33.67■■■□□ 2.98
SLC16A3-212ENST00000581642 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
SLC16A3-212ENST00000581642 WDR62O43379 1518 aa33.53■■■□□ 2.96
SLC16A3-212ENST00000581642 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
SLC16A3-212ENST00000581642 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
SLC16A3-212ENST00000581642 CFTRP13569 1480 aa33.44■■■□□ 2.94
SLC16A3-212ENST00000581642 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
SLC16A3-212ENST00000581642 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
SLC16A3-212ENST00000581642 CCDC88BA6NC98 1476 aa33.18■■■□□ 2.9
SLC16A3-212ENST00000581642 TRIM41Q8WV44 630 aa33.04■■■□□ 2.88
SLC16A3-212ENST00000581642 OSCARQ8IYS5 282 aa32.89■■■□□ 2.86
SLC16A3-212ENST00000581642 TOPBP1Q92547 1522 aa32.85■■■□□ 2.85
SLC16A3-212ENST00000581642 ZNF608Q9ULD9 1512 aaPredicted RBP32.84■■■□□ 2.85
SLC16A3-212ENST00000581642 IFT140Q96RY7 1462 aa32.81■■■□□ 2.84
SLC16A3-212ENST00000581642 DNMBPQ6XZF7 1577 aa32.71■■■□□ 2.83
SLC16A3-212ENST00000581642 ABCC8Q09428 1581 aa32.7■■■□□ 2.82
SLC16A3-212ENST00000581642 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
SLC16A3-212ENST00000581642 EIF4G3O43432 1585 aaKnown RBP32.63■■■□□ 2.81
SLC16A3-212ENST00000581642 TARBP1Q13395 1621 aaKnown RBP32.56■■■□□ 2.8
SLC16A3-212ENST00000581642 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.83e-13■■■■■ 37
SLC16A3-212ENST00000581642 POLA1P09884 1462 aaPredicted RBP32.52■■■□□ 2.8
SLC16A3-212ENST00000581642 RIMBP3CA6NJZ7 1639 aa32.51■■■□□ 2.79
SLC16A3-212ENST00000581642 RIMBP3BA6NNM3 1639 aa32.51■■■□□ 2.79
SLC16A3-212ENST00000581642 RIMBP3Q9UFD9 1639 aa32.51■■■□□ 2.79
SLC16A3-212ENST00000581642 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
SLC16A3-212ENST00000581642 CHD1O14646 1710 aa32.43■■■□□ 2.78
SLC16A3-212ENST00000581642 SOGA1O94964 1423 aa32.38■■■□□ 2.77
SLC16A3-212ENST00000581642 ARHGEF11O15085 1522 aa32.37■■■□□ 2.77
SLC16A3-212ENST00000581642 FBLN2P98095 1184 aa32.36■■■□□ 2.77
SLC16A3-212ENST00000581642 TDRD9Q8NDG6 1382 aaKnown RBP32.35■■■□□ 2.77
SLC16A3-212ENST00000581642 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
SLC16A3-212ENST00000581642 CUX1P39880 1505 aa32.31■■■□□ 2.76
SLC16A3-212ENST00000581642 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
SLC16A3-212ENST00000581642 CYB5RLQ6IPT4 315 aa32.18■■■□□ 2.74
SLC16A3-212ENST00000581642 WDR97A6NE52 1622 aa32.12■■■□□ 2.73
SLC16A3-212ENST00000581642 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
SLC16A3-212ENST00000581642 CHMP7Q8WUX9 453 aaPredicted RBP32.07■■■□□ 2.72
SLC16A3-212ENST00000581642 GRIN2BQ13224 1484 aa32.06■■■□□ 2.72
SLC16A3-212ENST00000581642 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
SLC16A3-212ENST00000581642 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
SLC16A3-212ENST00000581642 PBRM1Q86U86 1689 aa32■■■□□ 2.71
SLC16A3-212ENST00000581642 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
SLC16A3-212ENST00000581642 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
SLC16A3-212ENST00000581642 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
SLC16A3-212ENST00000581642 SYNJ1O43426 1573 aa31.96■■■□□ 2.71
SLC16A3-212ENST00000581642 SYNJ2O15056 1496 aa31.95■■■□□ 2.7
SLC16A3-212ENST00000581642 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
SLC16A3-212ENST00000581642 ABCA10Q8WWZ4 1543 aa31.92■■■□□ 2.7
SLC16A3-212ENST00000581642 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
SLC16A3-212ENST00000581642 TRHP20396 242 aaPredicted RBP31.84■■■□□ 2.69
SLC16A3-212ENST00000581642 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
SLC16A3-212ENST00000581642 ADAMTS12P58397 1594 aa31.66■■■□□ 2.66
SLC16A3-212ENST00000581642 CEP170Q5SW79 1584 aa31.59■■■□□ 2.65
SLC16A3-212ENST00000581642 ERCC6L2Q5T890 1561 aa31.58■■■□□ 2.65
SLC16A3-212ENST00000581642 FHAD1B1AJZ9 1412 aa31.54■■■□□ 2.64
SLC16A3-212ENST00000581642 NUP160Q12769 1436 aa31.53■■■□□ 2.64
SLC16A3-212ENST00000581642 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
SLC16A3-212ENST00000581642 SHROOM2Q13796 1616 aa31.41■■■□□ 2.62
SLC16A3-212ENST00000581642 PRG4Q92954 1404 aaPredicted RBP31.29■■■□□ 2.6
SLC16A3-212ENST00000581642 KIF27Q86VH2 1401 aa31.28■■■□□ 2.6
SLC16A3-212ENST00000581642 JPH4Q96JJ6 628 aa31.25■■■□□ 2.59
SLC16A3-212ENST00000581642 CUL7Q14999 1698 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms