RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
HS6ST1-201ENST00000259241 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
HS6ST1-201ENST00000259241 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
HS6ST1-201ENST00000259241 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.18
HS6ST1-201ENST00000259241 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
HS6ST1-201ENST00000259241 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
HS6ST1-201ENST00000259241 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
HS6ST1-201ENST00000259241 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
HS6ST1-201ENST00000259241 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
HS6ST1-201ENST00000259241 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
HS6ST1-201ENST00000259241 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.86
HS6ST1-201ENST00000259241 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
HS6ST1-201ENST00000259241 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
HS6ST1-201ENST00000259241 ABCC9O60706 1549 aa20.23■□□□□ 0.83
HS6ST1-201ENST00000259241 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
HS6ST1-201ENST00000259241 APLP2Q06481 763 aa20.07■□□□□ 0.8
HS6ST1-201ENST00000259241 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
HS6ST1-201ENST00000259241 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
HS6ST1-201ENST00000259241 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
HS6ST1-201ENST00000259241 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
HS6ST1-201ENST00000259241 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
HS6ST1-201ENST00000259241 HRCP23327 699 aa19.66■□□□□ 0.74
HS6ST1-201ENST00000259241 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
HS6ST1-201ENST00000259241 ITGAEP38570 1179 aa19.52■□□□□ 0.71
HS6ST1-201ENST00000259241 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
HS6ST1-201ENST00000259241 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
HS6ST1-201ENST00000259241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
HS6ST1-201ENST00000259241 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
HS6ST1-201ENST00000259241 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
HS6ST1-201ENST00000259241 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
HS6ST1-201ENST00000259241 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
HS6ST1-201ENST00000259241 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
HS6ST1-201ENST00000259241 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
HS6ST1-201ENST00000259241 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
HS6ST1-201ENST00000259241 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
HS6ST1-201ENST00000259241 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
HS6ST1-201ENST00000259241 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
HS6ST1-201ENST00000259241 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
HS6ST1-201ENST00000259241 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
HS6ST1-201ENST00000259241 POLR3GLQ9BT43 218 aa18.81■□□□□ 0.6
HS6ST1-201ENST00000259241 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
HS6ST1-201ENST00000259241 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
HS6ST1-201ENST00000259241 FBLN2P98095 1184 aa18.79■□□□□ 0.6
HS6ST1-201ENST00000259241 NACADO15069 1562 aa18.78■□□□□ 0.6
HS6ST1-201ENST00000259241 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
HS6ST1-201ENST00000259241 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
HS6ST1-201ENST00000259241 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
HS6ST1-201ENST00000259241 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
HS6ST1-201ENST00000259241 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
HS6ST1-201ENST00000259241 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
HS6ST1-201ENST00000259241 NEFLP07196 543 aa18.48■□□□□ 0.55
HS6ST1-201ENST00000259241 SOGA1O94964 1423 aa18.48■□□□□ 0.55
HS6ST1-201ENST00000259241 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
HS6ST1-201ENST00000259241 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
HS6ST1-201ENST00000259241 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
HS6ST1-201ENST00000259241 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
HS6ST1-201ENST00000259241 CLIP1P30622 1438 aa18.42■□□□□ 0.54
HS6ST1-201ENST00000259241 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
HS6ST1-201ENST00000259241 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
HS6ST1-201ENST00000259241 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
HS6ST1-201ENST00000259241 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
HS6ST1-201ENST00000259241 CHIC2Q9UKJ5 165 aa18.37■□□□□ 0.53
HS6ST1-201ENST00000259241 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
HS6ST1-201ENST00000259241 BCANQ96GW7 911 aa18.34■□□□□ 0.53
HS6ST1-201ENST00000259241 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
HS6ST1-201ENST00000259241 WIZO95785 1651 aa18.32■□□□□ 0.52
HS6ST1-201ENST00000259241 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
HS6ST1-201ENST00000259241 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
HS6ST1-201ENST00000259241 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
HS6ST1-201ENST00000259241 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
HS6ST1-201ENST00000259241 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
HS6ST1-201ENST00000259241 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
HS6ST1-201ENST00000259241 MIER1Q8N108 512 aa18.17■□□□□ 0.5
HS6ST1-201ENST00000259241 EEA1Q15075 1411 aa18.14■□□□□ 0.49
HS6ST1-201ENST00000259241 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
HS6ST1-201ENST00000259241 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
HS6ST1-201ENST00000259241 ANP32CO43423 234 aa18.13■□□□□ 0.49
HS6ST1-201ENST00000259241 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
HS6ST1-201ENST00000259241 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
HS6ST1-201ENST00000259241 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
HS6ST1-201ENST00000259241 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
HS6ST1-201ENST00000259241 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
HS6ST1-201ENST00000259241 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
HS6ST1-201ENST00000259241 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
HS6ST1-201ENST00000259241 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
HS6ST1-201ENST00000259241 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
HS6ST1-201ENST00000259241 CUX2O14529 1486 aa18.02■□□□□ 0.48
HS6ST1-201ENST00000259241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
HS6ST1-201ENST00000259241 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
HS6ST1-201ENST00000259241 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
HS6ST1-201ENST00000259241 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
HS6ST1-201ENST00000259241 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
HS6ST1-201ENST00000259241 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
HS6ST1-201ENST00000259241 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
HS6ST1-201ENST00000259241 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
HS6ST1-201ENST00000259241 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
HS6ST1-201ENST00000259241 SMARCA4P51532 1647 aa17.89■□□□□ 0.46
HS6ST1-201ENST00000259241 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
HS6ST1-201ENST00000259241 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
HS6ST1-201ENST00000259241 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms