RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
CTDSP1-204ENST00000443891 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
CTDSP1-204ENST00000443891 ABCC9O60706 1549 aa36.22■■■■□ 3.39
CTDSP1-204ENST00000443891 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
CTDSP1-204ENST00000443891 NACADO15069 1562 aa34.49■■■■□ 3.11
CTDSP1-204ENST00000443891 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
CTDSP1-204ENST00000443891 MYO15BQ96JP2 1530 aa34.14■■■■□ 3.06
CTDSP1-204ENST00000443891 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
CTDSP1-204ENST00000443891 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
CTDSP1-204ENST00000443891 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.996e-15■■■■■ 28.9
CTDSP1-204ENST00000443891 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
CTDSP1-204ENST00000443891 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
CTDSP1-204ENST00000443891 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
CTDSP1-204ENST00000443891 SHROOM4Q9ULL8 1493 aa33.35■■■□□ 2.93
CTDSP1-204ENST00000443891 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
CTDSP1-204ENST00000443891 CC2D2AQ9P2K1 1620 aa32.75■■■□□ 2.83
CTDSP1-204ENST00000443891 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
CTDSP1-204ENST00000443891 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
CTDSP1-204ENST00000443891 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
CTDSP1-204ENST00000443891 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
CTDSP1-204ENST00000443891 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
CTDSP1-204ENST00000443891 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
CTDSP1-204ENST00000443891 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
CTDSP1-204ENST00000443891 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
CTDSP1-204ENST00000443891 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
CTDSP1-204ENST00000443891 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
CTDSP1-204ENST00000443891 ERCC6Q03468 1493 aa31.33■■■□□ 2.61
CTDSP1-204ENST00000443891 CUX2O14529 1486 aa31.32■■■□□ 2.6
CTDSP1-204ENST00000443891 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.6
CTDSP1-204ENST00000443891 DNAJC5Q9H3Z4 198 aa31.12■■■□□ 2.57
CTDSP1-204ENST00000443891 NESP48681 1621 aa31.12■■■□□ 2.57
CTDSP1-204ENST00000443891 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
CTDSP1-204ENST00000443891 PDS5BQ9NTI5 1447 aa30.93■■■□□ 2.54
CTDSP1-204ENST00000443891 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
CTDSP1-204ENST00000443891 WIZO95785 1651 aa30.84■■■□□ 2.53
CTDSP1-204ENST00000443891 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
CTDSP1-204ENST00000443891 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
CTDSP1-204ENST00000443891 KIF21AQ7Z4S6 1674 aa30.7■■■□□ 2.5
CTDSP1-204ENST00000443891 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
CTDSP1-204ENST00000443891 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
CTDSP1-204ENST00000443891 CFTRP13569 1480 aa30.53■■■□□ 2.48
CTDSP1-204ENST00000443891 WDR62O43379 1518 aa30.51■■■□□ 2.47
CTDSP1-204ENST00000443891 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
CTDSP1-204ENST00000443891 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
CTDSP1-204ENST00000443891 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
CTDSP1-204ENST00000443891 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
CTDSP1-204ENST00000443891 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
CTDSP1-204ENST00000443891 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
CTDSP1-204ENST00000443891 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
CTDSP1-204ENST00000443891 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
CTDSP1-204ENST00000443891 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
CTDSP1-204ENST00000443891 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
CTDSP1-204ENST00000443891 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
CTDSP1-204ENST00000443891 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
CTDSP1-204ENST00000443891 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
CTDSP1-204ENST00000443891 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
CTDSP1-204ENST00000443891 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
CTDSP1-204ENST00000443891 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.316e-12■■■■■ 82.1
CTDSP1-204ENST00000443891 SOGA1O94964 1423 aa29.49■■■□□ 2.31
CTDSP1-204ENST00000443891 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
CTDSP1-204ENST00000443891 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
CTDSP1-204ENST00000443891 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
CTDSP1-204ENST00000443891 CUX1P39880 1505 aa29.38■■■□□ 2.29
CTDSP1-204ENST00000443891 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
CTDSP1-204ENST00000443891 RIMBP3CA6NJZ7 1639 aa29.37■■■□□ 2.29
CTDSP1-204ENST00000443891 RIMBP3BA6NNM3 1639 aa29.37■■■□□ 2.29
CTDSP1-204ENST00000443891 RIMBP3Q9UFD9 1639 aa29.37■■■□□ 2.29
CTDSP1-204ENST00000443891 TDRD9Q8NDG6 1382 aaKnown RBP29.35■■■□□ 2.29
CTDSP1-204ENST00000443891 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
CTDSP1-204ENST00000443891 CHD1O14646 1710 aa29.28■■■□□ 2.28
CTDSP1-204ENST00000443891 FBLN2P98095 1184 aa29.28■■■□□ 2.28
CTDSP1-204ENST00000443891 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
CTDSP1-204ENST00000443891 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
CTDSP1-204ENST00000443891 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
CTDSP1-204ENST00000443891 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
CTDSP1-204ENST00000443891 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
CTDSP1-204ENST00000443891 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
CTDSP1-204ENST00000443891 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
CTDSP1-204ENST00000443891 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
CTDSP1-204ENST00000443891 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
CTDSP1-204ENST00000443891 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
CTDSP1-204ENST00000443891 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
CTDSP1-204ENST00000443891 ARAP1Q96P48 1450 aa29.04■■■□□ 2.24
CTDSP1-204ENST00000443891 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
CTDSP1-204ENST00000443891 PBRM1Q86U86 1689 aa29■■■□□ 2.23
CTDSP1-204ENST00000443891 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
CTDSP1-204ENST00000443891 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
CTDSP1-204ENST00000443891 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
CTDSP1-204ENST00000443891 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
CTDSP1-204ENST00000443891 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
CTDSP1-204ENST00000443891 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
CTDSP1-204ENST00000443891 NUP160Q12769 1436 aa28.76■■■□□ 2.19
CTDSP1-204ENST00000443891 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
CTDSP1-204ENST00000443891 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
CTDSP1-204ENST00000443891 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
CTDSP1-204ENST00000443891 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
CTDSP1-204ENST00000443891 KIF27Q86VH2 1401 aa28.48■■■□□ 2.15
CTDSP1-204ENST00000443891 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
CTDSP1-204ENST00000443891 IGF1RP08069 1367 aa28.43■■■□□ 2.14
CTDSP1-204ENST00000443891 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms