RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 NISCHQ9Y2I1 1504 aa43.66■■■■■ 4.58
PFN1-202ENST00000572383 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
PFN1-202ENST00000572383 ABCC9O60706 1549 aa38.73■■■■□ 3.79
PFN1-202ENST00000572383 RB1CC1Q8TDY2 1594 aa37.03■■■■□ 3.52
PFN1-202ENST00000572383 NACADO15069 1562 aa36.83■■■■□ 3.49
PFN1-202ENST00000572383 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
PFN1-202ENST00000572383 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.44
PFN1-202ENST00000572383 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
PFN1-202ENST00000572383 ZCCHC6Q5VYS8 1495 aaKnown RBP36.41■■■■□ 3.42
PFN1-202ENST00000572383 DCAF1Q9Y4B6 1507 aa36.13■■■■□ 3.38
PFN1-202ENST00000572383 DNAJC5BQ9UF47 199 aa36.1■■■■□ 3.37
PFN1-202ENST00000572383 BICRAQ9NZM4 1560 aa36.04■■■■□ 3.36
PFN1-202ENST00000572383 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
PFN1-202ENST00000572383 SCRIBQ14160 1630 aa35.63■■■■□ 3.29
PFN1-202ENST00000572383 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
PFN1-202ENST00000572383 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
PFN1-202ENST00000572383 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
PFN1-202ENST00000572383 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
PFN1-202ENST00000572383 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
PFN1-202ENST00000572383 NCAPD3P42695 1498 aa33.94■■■■□ 3.02
PFN1-202ENST00000572383 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
PFN1-202ENST00000572383 BAZ1AQ9NRL2 1556 aaPredicted RBP33.87■■■■□ 3.01
PFN1-202ENST00000572383 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
PFN1-202ENST00000572383 HMGXB3Q12766 1538 aa33.79■■■■□ 3
PFN1-202ENST00000572383 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
PFN1-202ENST00000572383 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
PFN1-202ENST00000572383 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
PFN1-202ENST00000572383 NESP48681 1621 aa33.4■■■□□ 2.94
PFN1-202ENST00000572383 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
PFN1-202ENST00000572383 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
PFN1-202ENST00000572383 WIZO95785 1651 aa33.33■■■□□ 2.93
PFN1-202ENST00000572383 CUX2O14529 1486 aa33.26■■■□□ 2.92
PFN1-202ENST00000572383 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
PFN1-202ENST00000572383 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
PFN1-202ENST00000572383 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
PFN1-202ENST00000572383 TOP2AP11388 1531 aaKnown RBP32.96■■■□□ 2.87
PFN1-202ENST00000572383 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
PFN1-202ENST00000572383 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
PFN1-202ENST00000572383 DNAJC5Q9H3Z4 198 aa32.89■■■□□ 2.86
PFN1-202ENST00000572383 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
PFN1-202ENST00000572383 MRC2Q9UBG0 1479 aa32.65■■■□□ 2.82
PFN1-202ENST00000572383 WDR62O43379 1518 aa32.63■■■□□ 2.81
PFN1-202ENST00000572383 PRDM2Q13029 1718 aa32.63■■■□□ 2.81
PFN1-202ENST00000572383 CFTRP13569 1480 aa32.62■■■□□ 2.81
PFN1-202ENST00000572383 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
PFN1-202ENST00000572383 CEP164Q9UPV0 1460 aa32.57■■■□□ 2.8
PFN1-202ENST00000572383 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
PFN1-202ENST00000572383 URB2Q14146 1524 aaKnown RBP32.33■■■□□ 2.77
PFN1-202ENST00000572383 TOPBP1Q92547 1522 aa32■■■□□ 2.71
PFN1-202ENST00000572383 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
PFN1-202ENST00000572383 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
PFN1-202ENST00000572383 IFT140Q96RY7 1462 aa31.88■■■□□ 2.69
PFN1-202ENST00000572383 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
PFN1-202ENST00000572383 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
PFN1-202ENST00000572383 EIF4G3O43432 1585 aaKnown RBP31.8■■■□□ 2.68
PFN1-202ENST00000572383 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
PFN1-202ENST00000572383 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
PFN1-202ENST00000572383 CHD1O14646 1710 aa31.62■■■□□ 2.65
PFN1-202ENST00000572383 CUX1P39880 1505 aa31.58■■■□□ 2.65
PFN1-202ENST00000572383 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.641e-7■■■■□ 24.6
PFN1-202ENST00000572383 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
PFN1-202ENST00000572383 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
PFN1-202ENST00000572383 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
PFN1-202ENST00000572383 SOGA1O94964 1423 aa31.51■■■□□ 2.64
PFN1-202ENST00000572383 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
PFN1-202ENST00000572383 RIMBP3CA6NJZ7 1639 aa31.48■■■□□ 2.63
PFN1-202ENST00000572383 RIMBP3BA6NNM3 1639 aa31.48■■■□□ 2.63
PFN1-202ENST00000572383 RIMBP3Q9UFD9 1639 aa31.48■■■□□ 2.63
PFN1-202ENST00000572383 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.62
PFN1-202ENST00000572383 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
PFN1-202ENST00000572383 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
PFN1-202ENST00000572383 PBRM1Q86U86 1689 aa31.34■■■□□ 2.61
PFN1-202ENST00000572383 TOP2BQ02880 1626 aa31.34■■■□□ 2.61
PFN1-202ENST00000572383 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
PFN1-202ENST00000572383 ARHGEF11O15085 1522 aa31.32■■■□□ 2.6
PFN1-202ENST00000572383 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
PFN1-202ENST00000572383 ABCA5Q8WWZ7 1642 aa31.22■■■□□ 2.59
PFN1-202ENST00000572383 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
PFN1-202ENST00000572383 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
PFN1-202ENST00000572383 FBLN2P98095 1184 aa31.19■■■□□ 2.58
PFN1-202ENST00000572383 MAGI1Q96QZ7 1491 aaPredicted RBP31.19■■■□□ 2.58
PFN1-202ENST00000572383 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
PFN1-202ENST00000572383 CLASP1Q7Z460 1538 aa31.13■■■□□ 2.57
PFN1-202ENST00000572383 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
PFN1-202ENST00000572383 CHMP7Q8WUX9 453 aaPredicted RBP31.05■■■□□ 2.56
PFN1-202ENST00000572383 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
PFN1-202ENST00000572383 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
PFN1-202ENST00000572383 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
PFN1-202ENST00000572383 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
PFN1-202ENST00000572383 GRIN2AQ12879 1464 aa30.83■■■□□ 2.53
PFN1-202ENST00000572383 CEP170Q5SW79 1584 aa30.79■■■□□ 2.52
PFN1-202ENST00000572383 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
PFN1-202ENST00000572383 KIF27Q86VH2 1401 aa30.75■■■□□ 2.51
PFN1-202ENST00000572383 NUP160Q12769 1436 aa30.71■■■□□ 2.51
PFN1-202ENST00000572383 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
PFN1-202ENST00000572383 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
PFN1-202ENST00000572383 IGF1RP08069 1367 aa30.62■■■□□ 2.49
PFN1-202ENST00000572383 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
PFN1-202ENST00000572383 RUSC2Q8N2Y8 1516 aa30.59■■■□□ 2.49
PFN1-202ENST00000572383 CUL7Q14999 1698 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms