RNA–Protein interactions for RNA: ENST00000300181.6

TSC22D4-201, Transcript of TSC22 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D4, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-201ENST00000300181 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
TSC22D4-201ENST00000300181 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
TSC22D4-201ENST00000300181 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
TSC22D4-201ENST00000300181 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
TSC22D4-201ENST00000300181 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
TSC22D4-201ENST00000300181 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
TSC22D4-201ENST00000300181 ABCC9O60706 1549 aa29.94■■■□□ 2.38
TSC22D4-201ENST00000300181 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
TSC22D4-201ENST00000300181 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
TSC22D4-201ENST00000300181 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
TSC22D4-201ENST00000300181 NACADO15069 1562 aa29.4■■■□□ 2.3
TSC22D4-201ENST00000300181 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
TSC22D4-201ENST00000300181 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
TSC22D4-201ENST00000300181 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
TSC22D4-201ENST00000300181 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
TSC22D4-201ENST00000300181 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.13
TSC22D4-201ENST00000300181 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
TSC22D4-201ENST00000300181 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
TSC22D4-201ENST00000300181 WIZO95785 1651 aa28.23■■■□□ 2.11
TSC22D4-201ENST00000300181 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
TSC22D4-201ENST00000300181 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
TSC22D4-201ENST00000300181 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
TSC22D4-201ENST00000300181 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
TSC22D4-201ENST00000300181 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
TSC22D4-201ENST00000300181 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
TSC22D4-201ENST00000300181 SMARCA2P51531 1590 aa27.59■■■□□ 2.01
TSC22D4-201ENST00000300181 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
TSC22D4-201ENST00000300181 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
TSC22D4-201ENST00000300181 EIF4G1Q04637 1599 aaKnown RBP27.45■■□□□ 1.99
TSC22D4-201ENST00000300181 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
TSC22D4-201ENST00000300181 LOC105371045A0A1W2PR82 267 aa27.28■■□□□ 1.96
TSC22D4-201ENST00000300181 ABCC8Q09428 1581 aa27.24■■□□□ 1.95
TSC22D4-201ENST00000300181 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.95
TSC22D4-201ENST00000300181 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
TSC22D4-201ENST00000300181 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
TSC22D4-201ENST00000300181 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
TSC22D4-201ENST00000300181 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
TSC22D4-201ENST00000300181 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.899e-6■■■■■ 50.1
TSC22D4-201ENST00000300181 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
TSC22D4-201ENST00000300181 SOGA1O94964 1423 aa26.76■■□□□ 1.87
TSC22D4-201ENST00000300181 CFTRP13569 1480 aa26.69■■□□□ 1.86
TSC22D4-201ENST00000300181 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
TSC22D4-201ENST00000300181 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
TSC22D4-201ENST00000300181 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
TSC22D4-201ENST00000300181 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
TSC22D4-201ENST00000300181 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
TSC22D4-201ENST00000300181 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
TSC22D4-201ENST00000300181 EEA1Q15075 1411 aa26.5■■□□□ 1.83
TSC22D4-201ENST00000300181 CUX1P39880 1505 aa26.5■■□□□ 1.83
TSC22D4-201ENST00000300181 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
TSC22D4-201ENST00000300181 NESP48681 1621 aa26.41■■□□□ 1.82
TSC22D4-201ENST00000300181 PCGF6Q9BYE7 350 aa26.37■■□□□ 1.81
TSC22D4-201ENST00000300181 FANCD2Q9BXW9 1451 aa26.32■■□□□ 1.8
TSC22D4-201ENST00000300181 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
TSC22D4-201ENST00000300181 HRCP23327 699 aa26.32■■□□□ 1.8
TSC22D4-201ENST00000300181 GOLGA3Q08378 1498 aa26.28■■□□□ 1.8
TSC22D4-201ENST00000300181 TNIKQ9UKE5 1360 aa26.23■■□□□ 1.79
TSC22D4-201ENST00000300181 KIF21BO75037 1637 aa26.23■■□□□ 1.79
TSC22D4-201ENST00000300181 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
TSC22D4-201ENST00000300181 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
TSC22D4-201ENST00000300181 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
TSC22D4-201ENST00000300181 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
TSC22D4-201ENST00000300181 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
TSC22D4-201ENST00000300181 KIF27Q86VH2 1401 aa26.13■■□□□ 1.77
TSC22D4-201ENST00000300181 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
TSC22D4-201ENST00000300181 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
TSC22D4-201ENST00000300181 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
TSC22D4-201ENST00000300181 CUX2O14529 1486 aa26.07■■□□□ 1.76
TSC22D4-201ENST00000300181 TOPBP1Q92547 1522 aa26.06■■□□□ 1.76
TSC22D4-201ENST00000300181 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
TSC22D4-201ENST00000300181 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
TSC22D4-201ENST00000300181 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
TSC22D4-201ENST00000300181 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
TSC22D4-201ENST00000300181 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
TSC22D4-201ENST00000300181 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
TSC22D4-201ENST00000300181 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
TSC22D4-201ENST00000300181 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
TSC22D4-201ENST00000300181 CLIP1P30622 1438 aa25.93■■□□□ 1.74
TSC22D4-201ENST00000300181 IGF1RP08069 1367 aa25.9■■□□□ 1.74
TSC22D4-201ENST00000300181 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
TSC22D4-201ENST00000300181 ABCA10Q8WWZ4 1543 aa25.84■■□□□ 1.73
TSC22D4-201ENST00000300181 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
TSC22D4-201ENST00000300181 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
TSC22D4-201ENST00000300181 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
TSC22D4-201ENST00000300181 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.7
TSC22D4-201ENST00000300181 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
TSC22D4-201ENST00000300181 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.69
TSC22D4-201ENST00000300181 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
TSC22D4-201ENST00000300181 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
TSC22D4-201ENST00000300181 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
TSC22D4-201ENST00000300181 CUL7Q14999 1698 aa25.6■■□□□ 1.69
TSC22D4-201ENST00000300181 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
TSC22D4-201ENST00000300181 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
TSC22D4-201ENST00000300181 APLP2Q06481 763 aa25.53■■□□□ 1.68
TSC22D4-201ENST00000300181 WDR62O43379 1518 aa25.51■■□□□ 1.67
TSC22D4-201ENST00000300181 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.672e-9■■■□□ 15.2
TSC22D4-201ENST00000300181 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
TSC22D4-201ENST00000300181 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
TSC22D4-201ENST00000300181 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
TSC22D4-201ENST00000300181 THOC2Q8NI27 1593 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms