RNA–Protein interactions for RNA: ENST00000591996.1

PGS1-214, Transcript of phosphatidylglycerophosphate synthase 1, humanhuman

TSL 1 (best)

Gene PGS1, Length 3,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGS1-214ENST00000591996 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
PGS1-214ENST00000591996 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
PGS1-214ENST00000591996 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
PGS1-214ENST00000591996 CCDC180Q9P1Z9 1646 aa22■■□□□ 1.11
PGS1-214ENST00000591996 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
PGS1-214ENST00000591996 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
PGS1-214ENST00000591996 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
PGS1-214ENST00000591996 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
PGS1-214ENST00000591996 HRCP23327 699 aa21.49■■□□□ 1.03
PGS1-214ENST00000591996 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
PGS1-214ENST00000591996 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
PGS1-214ENST00000591996 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
PGS1-214ENST00000591996 ABCC9O60706 1549 aa21.02■□□□□ 0.96
PGS1-214ENST00000591996 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
PGS1-214ENST00000591996 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
PGS1-214ENST00000591996 DCAF1Q9Y4B6 1507 aa20.65■□□□□ 0.9
PGS1-214ENST00000591996 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
PGS1-214ENST00000591996 NACADO15069 1562 aa20.52■□□□□ 0.88
PGS1-214ENST00000591996 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
PGS1-214ENST00000591996 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
PGS1-214ENST00000591996 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
PGS1-214ENST00000591996 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
PGS1-214ENST00000591996 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
PGS1-214ENST00000591996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
PGS1-214ENST00000591996 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
PGS1-214ENST00000591996 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
PGS1-214ENST00000591996 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
PGS1-214ENST00000591996 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
PGS1-214ENST00000591996 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
PGS1-214ENST00000591996 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
PGS1-214ENST00000591996 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
PGS1-214ENST00000591996 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
PGS1-214ENST00000591996 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
PGS1-214ENST00000591996 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
PGS1-214ENST00000591996 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
PGS1-214ENST00000591996 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
PGS1-214ENST00000591996 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
PGS1-214ENST00000591996 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
PGS1-214ENST00000591996 WIZO95785 1651 aa19.68■□□□□ 0.74
PGS1-214ENST00000591996 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
PGS1-214ENST00000591996 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
PGS1-214ENST00000591996 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
PGS1-214ENST00000591996 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
PGS1-214ENST00000591996 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
PGS1-214ENST00000591996 CENPBP07199 599 aaPredicted RBP19.46■□□□□ 0.71
PGS1-214ENST00000591996 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PGS1-214ENST00000591996 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
PGS1-214ENST00000591996 CEP162Q5TB80 1403 aa19.4■□□□□ 0.7
PGS1-214ENST00000591996 MIER1Q8N108 512 aa19.37■□□□□ 0.69
PGS1-214ENST00000591996 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
PGS1-214ENST00000591996 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
PGS1-214ENST00000591996 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
PGS1-214ENST00000591996 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
PGS1-214ENST00000591996 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
PGS1-214ENST00000591996 MYT1Q01538 1121 aa19.22■□□□□ 0.67
PGS1-214ENST00000591996 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
PGS1-214ENST00000591996 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
PGS1-214ENST00000591996 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
PGS1-214ENST00000591996 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
PGS1-214ENST00000591996 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
PGS1-214ENST00000591996 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
PGS1-214ENST00000591996 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
PGS1-214ENST00000591996 APLP2Q06481 763 aa18.98■□□□□ 0.63
PGS1-214ENST00000591996 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
PGS1-214ENST00000591996 ITGAEP38570 1179 aa18.97■□□□□ 0.63
PGS1-214ENST00000591996 CLIP1P30622 1438 aa18.95■□□□□ 0.62
PGS1-214ENST00000591996 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
PGS1-214ENST00000591996 HMGXB3Q12766 1538 aa18.89■□□□□ 0.62
PGS1-214ENST00000591996 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
PGS1-214ENST00000591996 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
PGS1-214ENST00000591996 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
PGS1-214ENST00000591996 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
PGS1-214ENST00000591996 KANK4Q5T7N3 995 aaPredicted RBP18.84■□□□□ 0.61
PGS1-214ENST00000591996 BCANQ96GW7 911 aa18.83■□□□□ 0.61
PGS1-214ENST00000591996 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
PGS1-214ENST00000591996 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
PGS1-214ENST00000591996 EEA1Q15075 1411 aa18.79■□□□□ 0.6
PGS1-214ENST00000591996 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
PGS1-214ENST00000591996 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
PGS1-214ENST00000591996 DHX57Q6P158 1386 aaKnown RBP18.72■□□□□ 0.59
PGS1-214ENST00000591996 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
PGS1-214ENST00000591996 KIF21BO75037 1637 aa18.69■□□□□ 0.58
PGS1-214ENST00000591996 TSHZ2Q9NRE2 1034 aa18.62■□□□□ 0.57
PGS1-214ENST00000591996 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
PGS1-214ENST00000591996 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
PGS1-214ENST00000591996 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
PGS1-214ENST00000591996 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
PGS1-214ENST00000591996 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
PGS1-214ENST00000591996 FKBP8Q14318 412 aa18.51■□□□□ 0.55
PGS1-214ENST00000591996 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
PGS1-214ENST00000591996 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
PGS1-214ENST00000591996 RAB3GAP2Q9H2M9 1393 aa18.41■□□□□ 0.54
PGS1-214ENST00000591996 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
PGS1-214ENST00000591996 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
PGS1-214ENST00000591996 CFTRP13569 1480 aa18.39■□□□□ 0.53
PGS1-214ENST00000591996 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
PGS1-214ENST00000591996 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
PGS1-214ENST00000591996 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
PGS1-214ENST00000591996 NESP48681 1621 aa18.35■□□□□ 0.53
PGS1-214ENST00000591996 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms