RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 NISCHQ9Y2I1 1504 aa40.33■■■■■ 4.05
TSC22D4-205ENST00000493217 CCDC180Q9P1Z9 1646 aa34.54■■■■□ 3.12
TSC22D4-205ENST00000493217 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
TSC22D4-205ENST00000493217 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
TSC22D4-205ENST00000493217 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
TSC22D4-205ENST00000493217 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
TSC22D4-205ENST00000493217 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.87
TSC22D4-205ENST00000493217 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
TSC22D4-205ENST00000493217 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
TSC22D4-205ENST00000493217 CHIC1Q5VXU3 224 aa32.07■■■□□ 2.72
TSC22D4-205ENST00000493217 ABCC9O60706 1549 aa32.05■■■□□ 2.72
TSC22D4-205ENST00000493217 NACADO15069 1562 aa32■■■□□ 2.71
TSC22D4-205ENST00000493217 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
TSC22D4-205ENST00000493217 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
TSC22D4-205ENST00000493217 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
TSC22D4-205ENST00000493217 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.6
TSC22D4-205ENST00000493217 WIZO95785 1651 aa31.06■■■□□ 2.56
TSC22D4-205ENST00000493217 BAZ1AQ9NRL2 1556 aaPredicted RBP31.01■■■□□ 2.56
TSC22D4-205ENST00000493217 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
TSC22D4-205ENST00000493217 LOC105371045A0A1W2PR82 267 aa30.98■■■□□ 2.55
TSC22D4-205ENST00000493217 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
TSC22D4-205ENST00000493217 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
TSC22D4-205ENST00000493217 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
TSC22D4-205ENST00000493217 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
TSC22D4-205ENST00000493217 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
TSC22D4-205ENST00000493217 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
TSC22D4-205ENST00000493217 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.48
TSC22D4-205ENST00000493217 CCDC88BA6NC98 1476 aa30.46■■■□□ 2.47
TSC22D4-205ENST00000493217 FAM9AQ8IZU1 332 aaPredicted RBP30.45■■■□□ 2.47
TSC22D4-205ENST00000493217 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
TSC22D4-205ENST00000493217 HRCP23327 699 aa30.43■■■□□ 2.46
TSC22D4-205ENST00000493217 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
TSC22D4-205ENST00000493217 TRIM26Q12899 539 aaPredicted RBP30.22■■■□□ 2.43
TSC22D4-205ENST00000493217 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
TSC22D4-205ENST00000493217 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
TSC22D4-205ENST00000493217 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
TSC22D4-205ENST00000493217 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
TSC22D4-205ENST00000493217 SOGA1O94964 1423 aa29.85■■■□□ 2.37
TSC22D4-205ENST00000493217 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.369e-6■■■■■ 50.1
TSC22D4-205ENST00000493217 EEA1Q15075 1411 aa29.8■■■□□ 2.36
TSC22D4-205ENST00000493217 PPARGC1BQ86YN6 1023 aaKnown RBP29.7■■■□□ 2.34
TSC22D4-205ENST00000493217 RUSC2Q8N2Y8 1516 aa29.69■■■□□ 2.34
TSC22D4-205ENST00000493217 CSRNP3Q8WYN3 585 aa29.68■■■□□ 2.34
TSC22D4-205ENST00000493217 SYNJ1O43426 1573 aa29.65■■■□□ 2.34
TSC22D4-205ENST00000493217 TNIKQ9UKE5 1360 aa29.62■■■□□ 2.33
TSC22D4-205ENST00000493217 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
TSC22D4-205ENST00000493217 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
TSC22D4-205ENST00000493217 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
TSC22D4-205ENST00000493217 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
TSC22D4-205ENST00000493217 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
TSC22D4-205ENST00000493217 UBTFP17480 764 aaKnown RBP29.43■■■□□ 2.3
TSC22D4-205ENST00000493217 TOP2BQ02880 1626 aa29.4■■■□□ 2.3
TSC22D4-205ENST00000493217 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
TSC22D4-205ENST00000493217 KIF21BO75037 1637 aa29.38■■■□□ 2.29
TSC22D4-205ENST00000493217 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
TSC22D4-205ENST00000493217 CFTRP13569 1480 aa29.24■■■□□ 2.27
TSC22D4-205ENST00000493217 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
TSC22D4-205ENST00000493217 CUX1P39880 1505 aa29.14■■■□□ 2.26
TSC22D4-205ENST00000493217 CLIP1P30622 1438 aa29.1■■■□□ 2.25
TSC22D4-205ENST00000493217 TTBK1Q5TCY1 1321 aaPredicted RBP29.03■■■□□ 2.24
TSC22D4-205ENST00000493217 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
TSC22D4-205ENST00000493217 PRXQ9BXM0 1461 aa29.01■■■□□ 2.23
TSC22D4-205ENST00000493217 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
TSC22D4-205ENST00000493217 VPS8Q8N3P4 1428 aa28.97■■■□□ 2.23
TSC22D4-205ENST00000493217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.97■■■□□ 2.23
TSC22D4-205ENST00000493217 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
TSC22D4-205ENST00000493217 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
TSC22D4-205ENST00000493217 KIF27Q86VH2 1401 aa28.93■■■□□ 2.22
TSC22D4-205ENST00000493217 CCER1Q8TC90 406 aaPredicted RBP28.89■■■□□ 2.22
TSC22D4-205ENST00000493217 RANGAP1P46060 587 aaPredicted RBP28.77■■■□□ 2.2
TSC22D4-205ENST00000493217 APLP2Q06481 763 aa28.72■■■□□ 2.19
TSC22D4-205ENST00000493217 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
TSC22D4-205ENST00000493217 CUX2O14529 1486 aa28.68■■■□□ 2.18
TSC22D4-205ENST00000493217 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
TSC22D4-205ENST00000493217 IGF1RP08069 1367 aa28.65■■■□□ 2.18
TSC22D4-205ENST00000493217 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.18
TSC22D4-205ENST00000493217 ARHGAP35Q9NRY4 1499 aa28.52■■■□□ 2.16
TSC22D4-205ENST00000493217 HNRNPUL2Q1KMD3 747 aaKnown RBP28.5■■■□□ 2.15
TSC22D4-205ENST00000493217 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
TSC22D4-205ENST00000493217 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
TSC22D4-205ENST00000493217 NESP48681 1621 aa28.47■■■□□ 2.15
TSC22D4-205ENST00000493217 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
TSC22D4-205ENST00000493217 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
TSC22D4-205ENST00000493217 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
TSC22D4-205ENST00000493217 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.14
TSC22D4-205ENST00000493217 LAMC3Q9Y6N6 1575 aa28.38■■■□□ 2.13
TSC22D4-205ENST00000493217 RAD54L2Q9Y4B4 1467 aa28.36■■■□□ 2.13
TSC22D4-205ENST00000493217 RRBP1Q9P2E9 1410 aaKnown RBP28.28■■■□□ 2.12
TSC22D4-205ENST00000493217 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
TSC22D4-205ENST00000493217 MAP3K1Q13233 1512 aa28.22■■■□□ 2.11
TSC22D4-205ENST00000493217 CUL7Q14999 1698 aa28.19■■■□□ 2.1
TSC22D4-205ENST00000493217 DNAJC5BQ9UF47 199 aa28.18■■■□□ 2.1
TSC22D4-205ENST00000493217 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
TSC22D4-205ENST00000493217 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
TSC22D4-205ENST00000493217 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
TSC22D4-205ENST00000493217 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.1
TSC22D4-205ENST00000493217 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
TSC22D4-205ENST00000493217 CCNB3Q8WWL7 1395 aa28.12■■■□□ 2.09
TSC22D4-205ENST00000493217 ZNF316A6NFI3 1004 aaPredicted RBP28.08■■■□□ 2.09
TSC22D4-205ENST00000493217 CLSPNQ9HAW4 1339 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms