RNA–Protein interactions for RNA: ENST00000469019.1

HS6ST1-203, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 4

Gene HS6ST1, Length 559 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-203ENST00000469019 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
HS6ST1-203ENST00000469019 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
HS6ST1-203ENST00000469019 ABCC9O60706 1549 aa31.01■■■□□ 2.55
HS6ST1-203ENST00000469019 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
HS6ST1-203ENST00000469019 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
HS6ST1-203ENST00000469019 NACADO15069 1562 aa29.93■■■□□ 2.38
HS6ST1-203ENST00000469019 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
HS6ST1-203ENST00000469019 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
HS6ST1-203ENST00000469019 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
HS6ST1-203ENST00000469019 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
HS6ST1-203ENST00000469019 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
HS6ST1-203ENST00000469019 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
HS6ST1-203ENST00000469019 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
HS6ST1-203ENST00000469019 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
HS6ST1-203ENST00000469019 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
HS6ST1-203ENST00000469019 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
HS6ST1-203ENST00000469019 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
HS6ST1-203ENST00000469019 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
HS6ST1-203ENST00000469019 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
HS6ST1-203ENST00000469019 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
HS6ST1-203ENST00000469019 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
HS6ST1-203ENST00000469019 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
HS6ST1-203ENST00000469019 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
HS6ST1-203ENST00000469019 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
HS6ST1-203ENST00000469019 PEG3Q9GZU2 1588 aa27.53■■■□□ 2
HS6ST1-203ENST00000469019 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
HS6ST1-203ENST00000469019 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
HS6ST1-203ENST00000469019 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
HS6ST1-203ENST00000469019 WIZO95785 1651 aa27.33■■□□□ 1.97
HS6ST1-203ENST00000469019 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
HS6ST1-203ENST00000469019 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
HS6ST1-203ENST00000469019 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
HS6ST1-203ENST00000469019 NESP48681 1621 aa26.85■■□□□ 1.89
HS6ST1-203ENST00000469019 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
HS6ST1-203ENST00000469019 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
HS6ST1-203ENST00000469019 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
HS6ST1-203ENST00000469019 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
HS6ST1-203ENST00000469019 CFTRP13569 1480 aa26.72■■□□□ 1.87
HS6ST1-203ENST00000469019 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
HS6ST1-203ENST00000469019 FANCD2Q9BXW9 1451 aa26.53■■□□□ 1.84
HS6ST1-203ENST00000469019 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
HS6ST1-203ENST00000469019 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
HS6ST1-203ENST00000469019 CUX2O14529 1486 aa26.44■■□□□ 1.82
HS6ST1-203ENST00000469019 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
HS6ST1-203ENST00000469019 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
HS6ST1-203ENST00000469019 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
HS6ST1-203ENST00000469019 WDR62O43379 1518 aa26.25■■□□□ 1.79
HS6ST1-203ENST00000469019 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
HS6ST1-203ENST00000469019 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
HS6ST1-203ENST00000469019 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
HS6ST1-203ENST00000469019 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
HS6ST1-203ENST00000469019 CUX1P39880 1505 aa25.94■■□□□ 1.74
HS6ST1-203ENST00000469019 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
HS6ST1-203ENST00000469019 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
HS6ST1-203ENST00000469019 POLA1P09884 1462 aaPredicted RBP25.89■■□□□ 1.73
HS6ST1-203ENST00000469019 SOGA1O94964 1423 aa25.86■■□□□ 1.73
HS6ST1-203ENST00000469019 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
HS6ST1-203ENST00000469019 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
HS6ST1-203ENST00000469019 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
HS6ST1-203ENST00000469019 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
HS6ST1-203ENST00000469019 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
HS6ST1-203ENST00000469019 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
HS6ST1-203ENST00000469019 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
HS6ST1-203ENST00000469019 TDRD9Q8NDG6 1382 aaKnown RBP25.68■■□□□ 1.7
HS6ST1-203ENST00000469019 AQRO60306 1485 aaKnown RBP eCLIP25.67■■□□□ 1.71e-8■■■■■ 58.8
HS6ST1-203ENST00000469019 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
HS6ST1-203ENST00000469019 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
HS6ST1-203ENST00000469019 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
HS6ST1-203ENST00000469019 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
HS6ST1-203ENST00000469019 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
HS6ST1-203ENST00000469019 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
HS6ST1-203ENST00000469019 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
HS6ST1-203ENST00000469019 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
HS6ST1-203ENST00000469019 FBLN2P98095 1184 aa25.42■■□□□ 1.66
HS6ST1-203ENST00000469019 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
HS6ST1-203ENST00000469019 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
HS6ST1-203ENST00000469019 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
HS6ST1-203ENST00000469019 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
HS6ST1-203ENST00000469019 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
HS6ST1-203ENST00000469019 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
HS6ST1-203ENST00000469019 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
HS6ST1-203ENST00000469019 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
HS6ST1-203ENST00000469019 IGF1RP08069 1367 aa25.27■■□□□ 1.64
HS6ST1-203ENST00000469019 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
HS6ST1-203ENST00000469019 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
HS6ST1-203ENST00000469019 CHD1O14646 1710 aa25.17■■□□□ 1.62
HS6ST1-203ENST00000469019 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
HS6ST1-203ENST00000469019 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.62
HS6ST1-203ENST00000469019 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.61
HS6ST1-203ENST00000469019 CUL7Q14999 1698 aa25.08■■□□□ 1.61
HS6ST1-203ENST00000469019 EEA1Q15075 1411 aa25.05■■□□□ 1.6
HS6ST1-203ENST00000469019 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
HS6ST1-203ENST00000469019 NUP160Q12769 1436 aa25.03■■□□□ 1.6
HS6ST1-203ENST00000469019 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
HS6ST1-203ENST00000469019 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
HS6ST1-203ENST00000469019 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
HS6ST1-203ENST00000469019 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
HS6ST1-203ENST00000469019 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
HS6ST1-203ENST00000469019 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
HS6ST1-203ENST00000469019 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms