Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RACK1-226ENST00000511900 922 ntTSL 5 BASIC10.77□□□□□ -0.692e-11■■□□□ 13.6
RPS3P23396 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.772e-11■■□□□ 13.6
RPS3P23396 RACK1-219ENST00000508682 1208 ntTSL 59.4□□□□□ -0.92e-11■■□□□ 13.6
RPS3P23396 RACK1-224ENST00000511473 1150 ntTSL 59.35□□□□□ -0.912e-11■■□□□ 13.6
RPS3P23396 RACK1-225ENST00000511566 825 ntTSL 3 BASIC9.35□□□□□ -0.912e-11■■□□□ 13.6
RPS3P23396 RACK1-210ENST00000504325 1098 ntTSL 1 (best)9.23□□□□□ -0.932e-11■■□□□ 13.6
RPS3P23396 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.62□□□□□ -1.032e-11■■□□□ 13.6
RPS3P23396 RACK1-228ENST00000512968 1058 ntTSL 58.54□□□□□ -1.042e-11■■□□□ 13.6
RPS3P23396 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.11□□□□□ -1.112e-11■■□□□ 13.6
RPS3P23396 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.19□□□□□ -0.463e-7■■□□□ 13.6
RPS3P23396 HSBP1-203ENST00000569301 551 ntTSL 24.52□□□□□ -1.692e-6■■□□□ 13.6
RPS3P23396 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.058e-52■■□□□ 13.6
RPS3P23396 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.033e-7■■□□□ 13.6
RPS3P23396 LONP1-206ENST00000587552 2816 ntTSL 214.51□□□□□ -0.093e-7■■□□□ 13.6
RPS3P23396 AGRN-203ENST00000461111 3385 ntTSL 1 (best)12.13□□□□□ -0.471e-6■■□□□ 13.6
RPS3P23396 WDR13-208ENST00000486125 936 ntTSL 219.52■□□□□ 0.724e-7■■□□□ 13.6
RPS3P23396 WDR13-209ENST00000492715 2612 ntTSL 516.5■□□□□ 0.234e-7■■□□□ 13.6
RPS3P23396 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.721e-11■■□□□ 13.6
RPS3P23396 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.73■□□□□ 0.431e-11■■□□□ 13.6
RPS3P23396 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.743e-8■■□□□ 13.6
RPS3P23396 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.723e-8■■□□□ 13.6
RPS3P23396 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.123e-8■■□□□ 13.6
RPS3P23396 LDLR-214ENST00000560628 535 ntTSL 39.81□□□□□ -0.843e-8■■□□□ 13.6
RPS3P23396 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.213e-6■■□□□ 13.6
RPS3P23396 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-6■■□□□ 13.6
RPS3P23396 PPIE-210ENST00000475350 1213 ntTSL 29.35□□□□□ -0.913e-6■■□□□ 13.6
RPS3P23396 PPIE-212ENST00000482751 2564 ntTSL 29.31□□□□□ -0.923e-6■■□□□ 13.6
RPS3P23396 PPIE-201ENST00000324379 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-6■■□□□ 13.6
RPS3P23396 PPIE-204ENST00000372835 842 ntTSL 39.14□□□□□ -0.953e-6■■□□□ 13.6
RPS3P23396 PPIE-214ENST00000495526 4651 ntTSL 1 (best)7.68□□□□□ -1.183e-6■■□□□ 13.6
RPS3P23396 RPS3-206ENST00000526248 771 ntTSL 515.34■□□□□ 0.057e-13■■□□□ 13.6
RPS3P23396 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.23□□□□□ -0.137e-13■■□□□ 13.6
RPS3P23396 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.47e-13■■□□□ 13.6
RPS3P23396 RPS3-216ENST00000530721 796 ntTSL 312.33□□□□□ -0.447e-13■■□□□ 13.6
RPS3P23396 RPS3-218ENST00000532872 737 ntTSL 312.33□□□□□ -0.447e-13■■□□□ 13.6
RPS3P23396 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.487e-13■■□□□ 13.6
RPS3P23396 RPS3-202ENST00000422465 903 ntTSL 210.28□□□□□ -0.767e-13■■□□□ 13.6
RPS3P23396 RPS3-204ENST00000525690 421 ntTSL 39.94□□□□□ -0.821e-20■■□□□ 13.6
RPS3P23396 RPS3-210ENST00000528439 473 ntTSL 39.94□□□□□ -0.827e-13■■□□□ 13.6
RPS3P23396 RPS3-219ENST00000534440 564 ntTSL 2 BASIC9.94□□□□□ -0.827e-13■■□□□ 13.6
RPS3P23396 RPS3-205ENST00000525933 1307 ntTSL 59.55□□□□□ -0.881e-20■■□□□ 13.6
RPS3P23396 PLXNB2-208ENST00000463165 3038 ntTSL 212.56□□□□□ -0.43e-7■■□□□ 13.6
RPS3P23396 SERPINA5-206ENST00000554633 533 ntTSL 410.5□□□□□ -0.732e-14■■□□□ 13.6
RPS3P23396 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.798e-9■■□□□ 13.6
RPS3P23396 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.798e-9■■□□□ 13.6
RPS3P23396 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.798e-9■■□□□ 13.6
RPS3P23396 MARS-231ENST00000553123 724 ntTSL 27.73□□□□□ -1.178e-9■■□□□ 13.6
RPS3P23396 ACSS2-205ENST00000467019 504 ntTSL 420.54■□□□□ 0.888e-7■■□□□ 13.6
RPS3P23396 ACSS2-208ENST00000473172 665 ntTSL 319.25■□□□□ 0.678e-7■■□□□ 13.6
RPS3P23396 POLD1-206ENST00000596221 412 ntTSL 217.39■□□□□ 0.371e-7■■□□□ 13.6
RPS3P23396 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.281e-7■■□□□ 13.6
RPS3P23396 POLD1-209ENST00000597963 737 ntTSL 216.69■□□□□ 0.261e-7■■□□□ 13.6
RPS3P23396 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.69□□□□□ -0.061e-6■■□□□ 13.6
RPS3P23396 ACSS2-215ENST00000481971 570 ntTSL 414.1□□□□□ -0.158e-7■■□□□ 13.6
RPS3P23396 ACSS2-212ENST00000480274 567 ntTSL 513.34□□□□□ -0.278e-7■■□□□ 13.6
RPS3P23396 ACSS2-209ENST00000475459 558 ntTSL 412.52□□□□□ -0.418e-7■■□□□ 13.6
RPS3P23396 ACSS2-217ENST00000488172 648 ntTSL 49.44□□□□□ -0.98e-7■■□□□ 13.6
RPS3P23396 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC9.3□□□□□ -0.921e-6■■□□□ 13.6
RPS3P23396 HNRNPK-208ENST00000481820 957 ntTSL 24.56□□□□□ -1.689e-10■■□□□ 13.6
RPS3P23396 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.81■□□□□ 0.441e-6■■□□□ 13.6
RPS3P23396 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.411e-6■■□□□ 13.6
RPS3P23396 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC12.29□□□□□ -0.441e-6■■□□□ 13.6
RPS3P23396 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC11.93□□□□□ -0.51e-6■■□□□ 13.6
RPS3P23396 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.651e-6■■□□□ 13.6
RPS3P23396 DAP3-224ENST00000497826 807 ntTSL 53.87□□□□□ -1.791e-6■■□□□ 13.6
RPS3P23396 GART-202ENST00000366093 805 ntTSL 38.11□□□□□ -1.115e-8■■□□□ 13.6
RPS3P23396 VARS2-209ENST00000477288 6054 ntTSL 217.81■□□□□ 0.442e-8■■□□□ 13.5
RPS3P23396 VARS2-206ENST00000473916 2000 ntTSL 217.81■□□□□ 0.442e-8■■□□□ 13.5
RPS3P23396 VARS2-207ENST00000476162 2228 ntTSL 1 (best)15.74■□□□□ 0.112e-8■■□□□ 13.5
RPS3P23396 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.052e-8■■□□□ 13.5
RPS3P23396 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.75□□□□□ -0.052e-8■■□□□ 13.5
RPS3P23396 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.43□□□□□ -0.12e-8■■□□□ 13.5
RPS3P23396 VARS2-205ENST00000469358 3429 ntTSL 511.68□□□□□ -0.542e-8■■□□□ 13.5
RPS3P23396 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC11.03□□□□□ -0.642e-8■■□□□ 13.5
RPS3P23396 TFRC-206ENST00000463047 549 ntTSL 24.41□□□□□ -1.71e-8■■□□□ 13.5
RPS3P23396 PDIA4-202ENST00000413966 550 ntTSL 217.42■□□□□ 0.383e-36■■□□□ 13.5
RPS3P23396 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.621e-9■■□□□ 13.5
RPS3P23396 SMARCA1-205ENST00000617310 4291 ntTSL 29.66□□□□□ -0.861e-9■■□□□ 13.5
RPS3P23396 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.031e-9■■□□□ 13.5
RPS3P23396 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.061e-9■■□□□ 13.5
RPS3P23396 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.147e-11■■□□□ 13.5
RPS3P23396 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.62■■□□□ 1.057e-11■■□□□ 13.5
RPS3P23396 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.817e-11■■□□□ 13.5
RPS3P23396 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.91■□□□□ 0.787e-11■■□□□ 13.5
RPS3P23396 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.47□□□□□ -0.257e-11■■□□□ 13.5
RPS3P23396 XBP1-206ENST00000484256 2173 ntTSL 211.61□□□□□ -0.557e-11■■□□□ 13.5
RPS3P23396 NDUFA13-206ENST00000511584 640 ntTSL 214.2□□□□□ -0.141e-17■■□□□ 13.5
RPS3P23396 CD151-217ENST00000530320 648 ntTSL 313.69□□□□□ -0.222e-7■■□□□ 13.5
RPS3P23396 CD151-214ENST00000528867 545 ntTSL 417.74■□□□□ 0.433e-7■■□□□ 13.5
RPS3P23396 CD151-209ENST00000526439 713 ntTSL 210.79□□□□□ -0.683e-7■■□□□ 13.5
RPS3P23396 RBM4-209ENST00000515838 943 ntTSL 214.41□□□□□ -0.13e-11■■□□□ 13.5
RPS3P23396 CALM3-213ENST00000602169 590 ntTSL 213.13□□□□□ -0.313e-13■■□□□ 13.5
RPS3P23396 RBBP4-218ENST00000527118 700 ntTSL 315.03■□□□□ -03e-7■■□□□ 13.5
RPS3P23396 RBBP4-215ENST00000524393 583 ntTSL 312.18□□□□□ -0.463e-7■■□□□ 13.5
RPS3P23396 RBBP4-217ENST00000526193 568 ntTSL 48.24□□□□□ -1.093e-7■■□□□ 13.5
RPS3P23396 PUF60-207ENST00000526459 1003 ntTSL 214.02□□□□□ -0.173e-15■■□□□ 13.5
RPS3P23396 PUF60-211ENST00000527744 1007 ntTSL 212.01□□□□□ -0.493e-15■■□□□ 13.5
RPS3P23396 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.7■□□□□ 0.741e-16■■□□□ 13.5
RPS3P23396 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.233e-9■■□□□ 13.5
RPS3P23396 AHSA1-213ENST00000557476 584 ntTSL 315.6■□□□□ 0.098e-9■■□□□ 13.5
Retrieved 100 of 24,271 protein–RNA pairs in 125.8 ms