RNA–Protein interactions for RNA: ENST00000463047.1

TFRC-206, Transcript of transferrin receptor, humanhuman

TSL 2

Gene TFRC, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-206ENST00000463047 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
TFRC-206ENST00000463047 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
TFRC-206ENST00000463047 CCDC180Q9P1Z9 1646 aa9.07□□□□□ -0.96
TFRC-206ENST00000463047 POTEDQ86YR6 584 aa8.87□□□□□ -0.99
TFRC-206ENST00000463047 CHIC1Q5VXU3 224 aa8.82□□□□□ -1
TFRC-206ENST00000463047 ABCC9O60706 1549 aa8.69□□□□□ -1.02
TFRC-206ENST00000463047 DCAF8L2P0C7V8 631 aa8.63□□□□□ -1.03
TFRC-206ENST00000463047 ZCCHC6Q5VYS8 1495 aaKnown RBP8.59□□□□□ -1.03
TFRC-206ENST00000463047 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
TFRC-206ENST00000463047 NACADO15069 1562 aa8.45□□□□□ -1.06
TFRC-206ENST00000463047 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
TFRC-206ENST00000463047 MYO15BQ96JP2 1530 aa8.4□□□□□ -1.06
TFRC-206ENST00000463047 SHROOM4Q9ULL8 1493 aa8.36□□□□□ -1.07
TFRC-206ENST00000463047 SCRIBQ14160 1630 aa8.34□□□□□ -1.07
TFRC-206ENST00000463047 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
TFRC-206ENST00000463047 SENP3Q9H4L4 574 aaPredicted RBP8.18□□□□□ -1.1
TFRC-206ENST00000463047 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
TFRC-206ENST00000463047 BICRAQ9NZM4 1560 aa8.13□□□□□ -1.11
TFRC-206ENST00000463047 PHF23Q9BUL5 403 aaPredicted RBP8.02□□□□□ -1.13
TFRC-206ENST00000463047 SUPT5HO00267 1087 aaKnown RBP7.99□□□□□ -1.13
TFRC-206ENST00000463047 CECR2Q9BXF3 1484 aa7.97□□□□□ -1.13
TFRC-206ENST00000463047 BAZ1AQ9NRL2 1556 aaPredicted RBP7.97□□□□□ -1.13
TFRC-206ENST00000463047 SMARCA4P51532 1647 aa7.96□□□□□ -1.14
TFRC-206ENST00000463047 EIF4G1Q04637 1599 aaKnown RBP7.93□□□□□ -1.14
TFRC-206ENST00000463047 MROH2BQ7Z745 1585 aa7.93□□□□□ -1.14
TFRC-206ENST00000463047 WIZO95785 1651 aa7.91□□□□□ -1.14
TFRC-206ENST00000463047 RSF1Q96T23 1441 aaPredicted RBP7.9□□□□□ -1.14
TFRC-206ENST00000463047 SMARCA2P51531 1590 aa7.86□□□□□ -1.15
TFRC-206ENST00000463047 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
TFRC-206ENST00000463047 BAZ1BQ9UIG0 1483 aaKnown RBP7.81□□□□□ -1.16
TFRC-206ENST00000463047 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
TFRC-206ENST00000463047 PEG3Q9GZU2 1588 aa7.81□□□□□ -1.16
TFRC-206ENST00000463047 TOP2AP11388 1531 aaKnown RBP7.8□□□□□ -1.16
TFRC-206ENST00000463047 HMGXB3Q12766 1538 aa7.78□□□□□ -1.16
TFRC-206ENST00000463047 FOXD1Q16676 465 aa7.77□□□□□ -1.17
TFRC-206ENST00000463047 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
TFRC-206ENST00000463047 CCDC88BA6NC98 1476 aa7.7□□□□□ -1.18
TFRC-206ENST00000463047 DNAJC5BQ9UF47 199 aa7.7□□□□□ -1.18
TFRC-206ENST00000463047 PRDM2Q13029 1718 aa7.63□□□□□ -1.19
TFRC-206ENST00000463047 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
TFRC-206ENST00000463047 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
TFRC-206ENST00000463047 MSH5O43196 834 aa7.56□□□□□ -1.2
TFRC-206ENST00000463047 NESP48681 1621 aa7.56□□□□□ -1.2
TFRC-206ENST00000463047 CFTRP13569 1480 aa7.55□□□□□ -1.2
TFRC-206ENST00000463047 KIF21AQ7Z4S6 1674 aa7.54□□□□□ -1.2
TFRC-206ENST00000463047 ABCC8Q09428 1581 aa7.53□□□□□ -1.2
TFRC-206ENST00000463047 PDS5BQ9NTI5 1447 aa7.52□□□□□ -1.2
TFRC-206ENST00000463047 FANCD2Q9BXW9 1451 aa7.52□□□□□ -1.21
TFRC-206ENST00000463047 TRIM41Q8WV44 630 aa7.51□□□□□ -1.21
TFRC-206ENST00000463047 ERCC6Q03468 1493 aa7.5□□□□□ -1.21
TFRC-206ENST00000463047 CEP164Q9UPV0 1460 aa7.5□□□□□ -1.21
TFRC-206ENST00000463047 WRNQ14191 1432 aaPredicted RBP eCLIP7.48□□□□□ -1.21
TFRC-206ENST00000463047 SYNJ1O43426 1573 aa7.45□□□□□ -1.22
TFRC-206ENST00000463047 TOP2BQ02880 1626 aa7.44□□□□□ -1.22
TFRC-206ENST00000463047 BIVM-ERCC5R4GMW8 1640 aa7.44□□□□□ -1.22
TFRC-206ENST00000463047 CUX1P39880 1505 aa7.43□□□□□ -1.22
TFRC-206ENST00000463047 DNMBPQ6XZF7 1577 aa7.43□□□□□ -1.22
TFRC-206ENST00000463047 MRC2Q9UBG0 1479 aa7.43□□□□□ -1.22
TFRC-206ENST00000463047 URB2Q14146 1524 aaKnown RBP7.41□□□□□ -1.22
TFRC-206ENST00000463047 TOPBP1Q92547 1522 aa7.41□□□□□ -1.22
TFRC-206ENST00000463047 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
TFRC-206ENST00000463047 FAM9AQ8IZU1 332 aaPredicted RBP7.39□□□□□ -1.23
TFRC-206ENST00000463047 FGD5Q6ZNL6 1462 aa7.38□□□□□ -1.23
TFRC-206ENST00000463047 WDR62O43379 1518 aa7.37□□□□□ -1.23
TFRC-206ENST00000463047 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
TFRC-206ENST00000463047 SOGA1O94964 1423 aa7.35□□□□□ -1.23
TFRC-206ENST00000463047 RAD54L2Q9Y4B4 1467 aa7.34□□□□□ -1.23
TFRC-206ENST00000463047 CUX2O14529 1486 aa7.33□□□□□ -1.24
TFRC-206ENST00000463047 EHMT2Q96KQ7 1210 aa7.33□□□□□ -1.24
TFRC-206ENST00000463047 WDR97A6NE52 1622 aa7.32□□□□□ -1.24
TFRC-206ENST00000463047 EEA1Q15075 1411 aa7.31□□□□□ -1.24
TFRC-206ENST00000463047 KIF27Q86VH2 1401 aa7.31□□□□□ -1.24
TFRC-206ENST00000463047 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
TFRC-206ENST00000463047 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
TFRC-206ENST00000463047 PBRM1Q86U86 1689 aa7.3□□□□□ -1.24
TFRC-206ENST00000463047 RUSC2Q8N2Y8 1516 aa7.3□□□□□ -1.24
TFRC-206ENST00000463047 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
TFRC-206ENST00000463047 CSRNP3Q8WYN3 585 aa7.28□□□□□ -1.24
TFRC-206ENST00000463047 TDRD9Q8NDG6 1382 aaKnown RBP7.28□□□□□ -1.24
TFRC-206ENST00000463047 GAPVD1Q14C86 1478 aa7.27□□□□□ -1.25
TFRC-206ENST00000463047 EIF4G3O43432 1585 aaKnown RBP7.27□□□□□ -1.25
TFRC-206ENST00000463047 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
TFRC-206ENST00000463047 CUL7Q14999 1698 aa7.25□□□□□ -1.25
TFRC-206ENST00000463047 AQRO60306 1485 aaKnown RBP eCLIP7.25□□□□□ -1.252e-17■■■■■ 27.8
TFRC-206ENST00000463047 ZNF608Q9ULD9 1512 aaPredicted RBP7.25□□□□□ -1.25
TFRC-206ENST00000463047 LOC105371045A0A1W2PR82 267 aa7.24□□□□□ -1.25
TFRC-206ENST00000463047 UBTFP17480 764 aaKnown RBP7.24□□□□□ -1.25
TFRC-206ENST00000463047 KIF21BO75037 1637 aa7.23□□□□□ -1.25
TFRC-206ENST00000463047 ERICH3Q5RHP9 1530 aa7.23□□□□□ -1.25
TFRC-206ENST00000463047 GRIN2BQ13224 1484 aa7.23□□□□□ -1.25
TFRC-206ENST00000463047 GOLGA3Q08378 1498 aa7.22□□□□□ -1.25
TFRC-206ENST00000463047 IGF1RP08069 1367 aa7.21□□□□□ -1.25
TFRC-206ENST00000463047 CARMIL1Q5VZK9 1371 aa7.21□□□□□ -1.25
TFRC-206ENST00000463047 FBLN2P98095 1184 aa7.21□□□□□ -1.26
TFRC-206ENST00000463047 SNAPC4Q5SXM2 1469 aa7.2□□□□□ -1.26
TFRC-206ENST00000463047 RAPGEF2Q9Y4G8 1499 aa7.2□□□□□ -1.26
TFRC-206ENST00000463047 ADAMTS12P58397 1594 aa7.2□□□□□ -1.26
TFRC-206ENST00000463047 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
TFRC-206ENST00000463047 RANGAP1P46060 587 aaPredicted RBP7.18□□□□□ -1.26
TFRC-206ENST00000463047 CHMP7Q8WUX9 453 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms