RNA–Protein interactions for RNA: ENST00000611155.4

XBP1-207, Transcript of X-box binding protein 1, humanhuman

TSL 5 BASIC

Gene XBP1, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-207ENST00000611155 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
XBP1-207ENST00000611155 CCDC180Q9P1Z9 1646 aa46.38■■■■■ 5.02
XBP1-207ENST00000611155 ABCC9O60706 1549 aa45.13■■■■■ 4.81
XBP1-207ENST00000611155 DCAF8L2P0C7V8 631 aa43.92■■■■■ 4.62
XBP1-207ENST00000611155 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
XBP1-207ENST00000611155 NACADO15069 1562 aa43.52■■■■■ 4.56
XBP1-207ENST00000611155 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
XBP1-207ENST00000611155 DCAF1Q9Y4B6 1507 aa43.41■■■■■ 4.54
XBP1-207ENST00000611155 MYO15BQ96JP2 1530 aa43.37■■■■■ 4.53
XBP1-207ENST00000611155 UNC13AQ9UPW8 1703 aa42.61■■■■■ 4.41
XBP1-207ENST00000611155 SCRIBQ14160 1630 aa42.55■■■■■ 4.4
XBP1-207ENST00000611155 PABPN1Q86U42 306 aaKnown RBP eCLIP42.35■■■■■ 4.37
XBP1-207ENST00000611155 BICRAQ9NZM4 1560 aa42.25■■■■■ 4.35
XBP1-207ENST00000611155 SHROOM4Q9ULL8 1493 aa42.07■■■■■ 4.32
XBP1-207ENST00000611155 DNAJC5BQ9UF47 199 aa41.1■■■■■ 4.17
XBP1-207ENST00000611155 EIF4G1Q04637 1599 aaKnown RBP41.05■■■■■ 4.16
XBP1-207ENST00000611155 CECR2Q9BXF3 1484 aa41.04■■■■■ 4.16
XBP1-207ENST00000611155 CC2D2AQ9P2K1 1620 aa40.79■■■■■ 4.12
XBP1-207ENST00000611155 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
XBP1-207ENST00000611155 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
XBP1-207ENST00000611155 MROH2BQ7Z745 1585 aa40.62■■■■■ 4.09
XBP1-207ENST00000611155 ATAD2BQ9ULI0 1458 aa40.36■■■■■ 4.05
XBP1-207ENST00000611155 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
XBP1-207ENST00000611155 SMARCA2P51531 1590 aa40.23■■■■■ 4.03
XBP1-207ENST00000611155 PEG3Q9GZU2 1588 aa40.22■■■■■ 4.03
XBP1-207ENST00000611155 NCAPD3P42695 1498 aa40.22■■■■■ 4.03
XBP1-207ENST00000611155 WIZO95785 1651 aa40.22■■■■■ 4.03
XBP1-207ENST00000611155 BAZ1BQ9UIG0 1483 aaKnown RBP40.02■■■■■ 4
XBP1-207ENST00000611155 HMGXB3Q12766 1538 aa40■■■■□ 3.99
XBP1-207ENST00000611155 SUPT5HO00267 1087 aaKnown RBP39.82■■■■□ 3.97
XBP1-207ENST00000611155 TOP2AP11388 1531 aaKnown RBP39.7■■■■□ 3.95
XBP1-207ENST00000611155 CCDC88BA6NC98 1476 aa39.33■■■■□ 3.89
XBP1-207ENST00000611155 NESP48681 1621 aa39.25■■■■□ 3.87
XBP1-207ENST00000611155 CADPSQ9ULU8 1353 aa39.1■■■■□ 3.85
XBP1-207ENST00000611155 LAMC3Q9Y6N6 1575 aa39.02■■■■□ 3.84
XBP1-207ENST00000611155 CFTRP13569 1480 aa38.97■■■■□ 3.83
XBP1-207ENST00000611155 PDS5BQ9NTI5 1447 aa38.76■■■■□ 3.8
XBP1-207ENST00000611155 ERCC6Q03468 1493 aa38.76■■■■□ 3.79
XBP1-207ENST00000611155 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
XBP1-207ENST00000611155 FANCD2Q9BXW9 1451 aa38.66■■■■□ 3.78
XBP1-207ENST00000611155 PRDM2Q13029 1718 aa38.62■■■■□ 3.77
XBP1-207ENST00000611155 CEP164Q9UPV0 1460 aa38.52■■■■□ 3.76
XBP1-207ENST00000611155 THOC2Q8NI27 1593 aaKnown RBP38.4■■■■□ 3.74
XBP1-207ENST00000611155 MRC2Q9UBG0 1479 aa38.35■■■■□ 3.73
XBP1-207ENST00000611155 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
XBP1-207ENST00000611155 WDR62O43379 1518 aa38.2■■■■□ 3.71
XBP1-207ENST00000611155 TOPBP1Q92547 1522 aa38.11■■■■□ 3.69
XBP1-207ENST00000611155 ABCC8Q09428 1581 aa38.11■■■■□ 3.69
XBP1-207ENST00000611155 CUX2O14529 1486 aa38.07■■■■□ 3.69
XBP1-207ENST00000611155 DNMBPQ6XZF7 1577 aa38.05■■■■□ 3.68
XBP1-207ENST00000611155 CUX1P39880 1505 aa38.05■■■■□ 3.68
XBP1-207ENST00000611155 WRNQ14191 1432 aaPredicted RBP eCLIP37.96■■■■□ 3.67
XBP1-207ENST00000611155 SYNJ1O43426 1573 aa37.89■■■■□ 3.66
XBP1-207ENST00000611155 POLA1P09884 1462 aaPredicted RBP37.83■■■■□ 3.65
XBP1-207ENST00000611155 FGD5Q6ZNL6 1462 aa37.81■■■■□ 3.64
XBP1-207ENST00000611155 TOP2BQ02880 1626 aa37.79■■■■□ 3.64
XBP1-207ENST00000611155 BIVM-ERCC5R4GMW8 1640 aa37.76■■■■□ 3.64
XBP1-207ENST00000611155 RAD54L2Q9Y4B4 1467 aa37.74■■■■□ 3.63
XBP1-207ENST00000611155 SOGA1O94964 1423 aa37.69■■■■□ 3.62
XBP1-207ENST00000611155 IFT140Q96RY7 1462 aa37.67■■■■□ 3.62
XBP1-207ENST00000611155 TARBP1Q13395 1621 aaKnown RBP37.65■■■■□ 3.62
XBP1-207ENST00000611155 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
XBP1-207ENST00000611155 TRIM41Q8WV44 630 aa37.49■■■■□ 3.59
XBP1-207ENST00000611155 TDRD9Q8NDG6 1382 aaKnown RBP37.49■■■■□ 3.59
XBP1-207ENST00000611155 AQRO60306 1485 aaKnown RBP eCLIP37.47■■■■□ 3.591e-8■■■■□ 24.7
XBP1-207ENST00000611155 CHIC1Q5VXU3 224 aa37.44■■■■□ 3.58
XBP1-207ENST00000611155 ABCA10Q8WWZ4 1543 aa37.43■■■■□ 3.58
XBP1-207ENST00000611155 WDR97A6NE52 1622 aa37.42■■■■□ 3.58
XBP1-207ENST00000611155 EIF4G3O43432 1585 aaKnown RBP37.38■■■■□ 3.58
XBP1-207ENST00000611155 GAPVD1Q14C86 1478 aa37.24■■■■□ 3.55
XBP1-207ENST00000611155 ABCA5Q8WWZ7 1642 aa37.23■■■■□ 3.55
XBP1-207ENST00000611155 GRIN2BQ13224 1484 aa37.12■■■■□ 3.53
XBP1-207ENST00000611155 RUSC2Q8N2Y8 1516 aa37.11■■■■□ 3.53
XBP1-207ENST00000611155 PBRM1Q86U86 1689 aa37.1■■■■□ 3.53
XBP1-207ENST00000611155 KIF27Q86VH2 1401 aa37.08■■■■□ 3.53
XBP1-207ENST00000611155 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
XBP1-207ENST00000611155 IGF1RP08069 1367 aa36.97■■■■□ 3.51
XBP1-207ENST00000611155 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
XBP1-207ENST00000611155 FBLN2P98095 1184 aa36.94■■■■□ 3.5
XBP1-207ENST00000611155 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
XBP1-207ENST00000611155 CHMP7Q8WUX9 453 aaPredicted RBP36.84■■■■□ 3.49
XBP1-207ENST00000611155 CHD1O14646 1710 aa36.84■■■■□ 3.49
XBP1-207ENST00000611155 FAM9AQ8IZU1 332 aaPredicted RBP36.83■■■■□ 3.49
XBP1-207ENST00000611155 ADAMTS12P58397 1594 aa36.83■■■■□ 3.49
XBP1-207ENST00000611155 SYNJ2O15056 1496 aa36.82■■■■□ 3.48
XBP1-207ENST00000611155 FHAD1B1AJZ9 1412 aa36.79■■■■□ 3.48
XBP1-207ENST00000611155 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
XBP1-207ENST00000611155 OSCARQ8IYS5 282 aa36.72■■■■□ 3.47
XBP1-207ENST00000611155 CSRNP3Q8WYN3 585 aa36.69■■■■□ 3.46
XBP1-207ENST00000611155 CUL7Q14999 1698 aa36.69■■■■□ 3.46
XBP1-207ENST00000611155 GRIN2AQ12879 1464 aa36.67■■■■□ 3.46
XBP1-207ENST00000611155 EEA1Q15075 1411 aa36.63■■■■□ 3.46
XBP1-207ENST00000611155 PRXQ9BXM0 1461 aa36.55■■■■□ 3.44
XBP1-207ENST00000611155 RAPGEF2Q9Y4G8 1499 aa36.52■■■■□ 3.44
XBP1-207ENST00000611155 CEP170Q5SW79 1584 aa36.51■■■■□ 3.44
XBP1-207ENST00000611155 NUP160Q12769 1436 aa36.48■■■■□ 3.43
XBP1-207ENST00000611155 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
XBP1-207ENST00000611155 EHMT2Q96KQ7 1210 aa36.42■■■■□ 3.42
XBP1-207ENST00000611155 CLASP1Q7Z460 1538 aa36.41■■■■□ 3.42
XBP1-207ENST00000611155 KIF21BO75037 1637 aa36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms