RNA–Protein interactions for RNA: ENST00000344347.5

XBP1-202, Transcript of X-box binding protein 1, humanhuman

TSL 5 BASIC

Gene XBP1, Length 1,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-202ENST00000344347 NISCHQ9Y2I1 1504 aa52.17■■■■■ 5.94
XBP1-202ENST00000344347 CCDC180Q9P1Z9 1646 aa46.77■■■■■ 5.08
XBP1-202ENST00000344347 ABCC9O60706 1549 aa46.69■■■■■ 5.06
XBP1-202ENST00000344347 RB1CC1Q8TDY2 1594 aa44.5■■■■■ 4.71
XBP1-202ENST00000344347 NACADO15069 1562 aa44.23■■■■■ 4.67
XBP1-202ENST00000344347 DCAF8L2P0C7V8 631 aa43.93■■■■■ 4.62
XBP1-202ENST00000344347 DNAJC5BQ9UF47 199 aa43.79■■■■■ 4.6
XBP1-202ENST00000344347 MYO15BQ96JP2 1530 aa43.7■■■■■ 4.59
XBP1-202ENST00000344347 PABPN1Q86U42 306 aaKnown RBP eCLIP43.48■■■■■ 4.55
XBP1-202ENST00000344347 UNC13AQ9UPW8 1703 aa43.43■■■■■ 4.54
XBP1-202ENST00000344347 ZCCHC6Q5VYS8 1495 aaKnown RBP43.25■■■■■ 4.51
XBP1-202ENST00000344347 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
XBP1-202ENST00000344347 DCAF1Q9Y4B6 1507 aa43.14■■■■■ 4.5
XBP1-202ENST00000344347 SHROOM4Q9ULL8 1493 aa42.69■■■■■ 4.42
XBP1-202ENST00000344347 SCRIBQ14160 1630 aa42.57■■■■■ 4.4
XBP1-202ENST00000344347 CC2D2AQ9P2K1 1620 aa42.19■■■■■ 4.34
XBP1-202ENST00000344347 EIF4G1Q04637 1599 aaKnown RBP42.14■■■■■ 4.34
XBP1-202ENST00000344347 CECR2Q9BXF3 1484 aa42.08■■■■■ 4.33
XBP1-202ENST00000344347 NCAPD3P42695 1498 aa40.87■■■■■ 4.13
XBP1-202ENST00000344347 ATAD2BQ9ULI0 1458 aa40.71■■■■■ 4.11
XBP1-202ENST00000344347 SMARCA4P51532 1647 aa40.66■■■■■ 4.1
XBP1-202ENST00000344347 SMARCA2P51531 1590 aa40.6■■■■■ 4.09
XBP1-202ENST00000344347 HMGXB3Q12766 1538 aa40.54■■■■■ 4.08
XBP1-202ENST00000344347 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
XBP1-202ENST00000344347 PEG3Q9GZU2 1588 aa40.31■■■■■ 4.04
XBP1-202ENST00000344347 ERCC6Q03468 1493 aa40.31■■■■■ 4.04
XBP1-202ENST00000344347 BAZ1BQ9UIG0 1483 aaKnown RBP40.3■■■■■ 4.04
XBP1-202ENST00000344347 CUX2O14529 1486 aa40.28■■■■■ 4.04
XBP1-202ENST00000344347 DNAJC5Q9H3Z4 198 aa40.21■■■■■ 4.03
XBP1-202ENST00000344347 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
XBP1-202ENST00000344347 NESP48681 1621 aa40.13■■■■■ 4.01
XBP1-202ENST00000344347 LAMC3Q9Y6N6 1575 aa39.9■■■■□ 3.98
XBP1-202ENST00000344347 THOC2Q8NI27 1593 aaKnown RBP39.72■■■■□ 3.95
XBP1-202ENST00000344347 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
XBP1-202ENST00000344347 WIZO95785 1651 aa39.67■■■■□ 3.94
XBP1-202ENST00000344347 CADPSQ9ULU8 1353 aa39.61■■■■□ 3.93
XBP1-202ENST00000344347 KIF21AQ7Z4S6 1674 aa39.58■■■■□ 3.93
XBP1-202ENST00000344347 RSF1Q96T23 1441 aaPredicted RBP39.39■■■■□ 3.9
XBP1-202ENST00000344347 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
XBP1-202ENST00000344347 WDR62O43379 1518 aa39.22■■■■□ 3.87
XBP1-202ENST00000344347 TOP2AP11388 1531 aaKnown RBP39.2■■■■□ 3.87
XBP1-202ENST00000344347 CFTRP13569 1480 aa39.17■■■■□ 3.86
XBP1-202ENST00000344347 CEP164Q9UPV0 1460 aa39.16■■■■□ 3.86
XBP1-202ENST00000344347 FANCD2Q9BXW9 1451 aa39.12■■■■□ 3.85
XBP1-202ENST00000344347 URB2Q14146 1524 aaKnown RBP38.8■■■■□ 3.8
XBP1-202ENST00000344347 CCDC88BA6NC98 1476 aa38.77■■■■□ 3.8
XBP1-202ENST00000344347 PRDM2Q13029 1718 aa38.69■■■■□ 3.78
XBP1-202ENST00000344347 OSCARQ8IYS5 282 aa38.44■■■■□ 3.74
XBP1-202ENST00000344347 IFT140Q96RY7 1462 aa38.4■■■■□ 3.74
XBP1-202ENST00000344347 TOPBP1Q92547 1522 aa38.39■■■■□ 3.74
XBP1-202ENST00000344347 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
XBP1-202ENST00000344347 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
XBP1-202ENST00000344347 ZNF608Q9ULD9 1512 aaPredicted RBP38.3■■■■□ 3.72
XBP1-202ENST00000344347 DNMBPQ6XZF7 1577 aa38.25■■■■□ 3.71
XBP1-202ENST00000344347 EIF4G3O43432 1585 aaKnown RBP38.07■■■■□ 3.69
XBP1-202ENST00000344347 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
XBP1-202ENST00000344347 POLA1P09884 1462 aaPredicted RBP38.01■■■■□ 3.67
XBP1-202ENST00000344347 AQRO60306 1485 aaKnown RBP eCLIP37.96■■■■□ 3.671e-8■■■■□ 24.7
XBP1-202ENST00000344347 RIMBP3CA6NJZ7 1639 aa37.89■■■■□ 3.66
XBP1-202ENST00000344347 RIMBP3BA6NNM3 1639 aa37.89■■■■□ 3.66
XBP1-202ENST00000344347 RIMBP3Q9UFD9 1639 aa37.89■■■■□ 3.66
XBP1-202ENST00000344347 RAD54L2Q9Y4B4 1467 aa37.84■■■■□ 3.65
XBP1-202ENST00000344347 SOGA1O94964 1423 aa37.84■■■■□ 3.65
XBP1-202ENST00000344347 ARHGEF11O15085 1522 aa37.8■■■■□ 3.64
XBP1-202ENST00000344347 FGD5Q6ZNL6 1462 aa37.77■■■■□ 3.64
XBP1-202ENST00000344347 CHD1O14646 1710 aa37.75■■■■□ 3.63
XBP1-202ENST00000344347 CUX1P39880 1505 aa37.74■■■■□ 3.63
XBP1-202ENST00000344347 TDRD9Q8NDG6 1382 aaKnown RBP37.74■■■■□ 3.63
XBP1-202ENST00000344347 WDR97A6NE52 1622 aa37.7■■■■□ 3.63
XBP1-202ENST00000344347 FBLN2P98095 1184 aa37.67■■■■□ 3.62
XBP1-202ENST00000344347 SUPT5HO00267 1087 aaKnown RBP37.61■■■■□ 3.61
XBP1-202ENST00000344347 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
XBP1-202ENST00000344347 GRIN2BQ13224 1484 aa37.52■■■■□ 3.6
XBP1-202ENST00000344347 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
XBP1-202ENST00000344347 CYB5RLQ6IPT4 315 aa37.51■■■■□ 3.6
XBP1-202ENST00000344347 CHMP7Q8WUX9 453 aaPredicted RBP37.45■■■■□ 3.59
XBP1-202ENST00000344347 ARAP1Q96P48 1450 aa37.44■■■■□ 3.58
XBP1-202ENST00000344347 CLASP1Q7Z460 1538 aa37.39■■■■□ 3.58
XBP1-202ENST00000344347 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
XBP1-202ENST00000344347 GAPVD1Q14C86 1478 aa37.38■■■■□ 3.57
XBP1-202ENST00000344347 ABCA10Q8WWZ4 1543 aa37.37■■■■□ 3.57
XBP1-202ENST00000344347 SYNJ1O43426 1573 aa37.36■■■■□ 3.57
XBP1-202ENST00000344347 PBRM1Q86U86 1689 aa37.3■■■■□ 3.56
XBP1-202ENST00000344347 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
XBP1-202ENST00000344347 WRNQ14191 1432 aaPredicted RBP eCLIP37.22■■■■□ 3.55
XBP1-202ENST00000344347 TOP2BQ02880 1626 aa37.16■■■■□ 3.54
XBP1-202ENST00000344347 BIVM-ERCC5R4GMW8 1640 aa37.15■■■■□ 3.54
XBP1-202ENST00000344347 TRHP20396 242 aaPredicted RBP37.05■■■■□ 3.52
XBP1-202ENST00000344347 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
XBP1-202ENST00000344347 ADAMTS12P58397 1594 aa36.99■■■■□ 3.51
XBP1-202ENST00000344347 NUP160Q12769 1436 aa36.93■■■■□ 3.5
XBP1-202ENST00000344347 FHAD1B1AJZ9 1412 aa36.92■■■■□ 3.5
XBP1-202ENST00000344347 ERICH3Q5RHP9 1530 aa36.9■■■■□ 3.5
XBP1-202ENST00000344347 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
XBP1-202ENST00000344347 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
XBP1-202ENST00000344347 SHROOM2Q13796 1616 aa36.73■■■■□ 3.47
XBP1-202ENST00000344347 JPH4Q96JJ6 628 aa36.54■■■■□ 3.44
XBP1-202ENST00000344347 PRG4Q92954 1404 aaPredicted RBP36.53■■■■□ 3.44
XBP1-202ENST00000344347 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
XBP1-202ENST00000344347 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms