RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
CALM3-213ENST00000602169 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
CALM3-213ENST00000602169 ABCC9O60706 1549 aa27.28■■□□□ 1.96
CALM3-213ENST00000602169 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
CALM3-213ENST00000602169 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
CALM3-213ENST00000602169 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CALM3-213ENST00000602169 NACADO15069 1562 aa26.16■■□□□ 1.78
CALM3-213ENST00000602169 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
CALM3-213ENST00000602169 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
CALM3-213ENST00000602169 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
CALM3-213ENST00000602169 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
CALM3-213ENST00000602169 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
CALM3-213ENST00000602169 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CALM3-213ENST00000602169 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
CALM3-213ENST00000602169 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
CALM3-213ENST00000602169 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
CALM3-213ENST00000602169 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
CALM3-213ENST00000602169 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
CALM3-213ENST00000602169 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
CALM3-213ENST00000602169 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
CALM3-213ENST00000602169 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
CALM3-213ENST00000602169 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
CALM3-213ENST00000602169 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
CALM3-213ENST00000602169 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
CALM3-213ENST00000602169 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
CALM3-213ENST00000602169 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
CALM3-213ENST00000602169 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
CALM3-213ENST00000602169 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
CALM3-213ENST00000602169 WIZO95785 1651 aa23.95■■□□□ 1.43
CALM3-213ENST00000602169 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
CALM3-213ENST00000602169 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
CALM3-213ENST00000602169 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
CALM3-213ENST00000602169 NESP48681 1621 aa23.51■■□□□ 1.35
CALM3-213ENST00000602169 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
CALM3-213ENST00000602169 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
CALM3-213ENST00000602169 CFTRP13569 1480 aa23.4■■□□□ 1.34
CALM3-213ENST00000602169 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
CALM3-213ENST00000602169 CUX2O14529 1486 aa23.27■■□□□ 1.32
CALM3-213ENST00000602169 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
CALM3-213ENST00000602169 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
CALM3-213ENST00000602169 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
CALM3-213ENST00000602169 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
CALM3-213ENST00000602169 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
CALM3-213ENST00000602169 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
CALM3-213ENST00000602169 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
CALM3-213ENST00000602169 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
CALM3-213ENST00000602169 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
CALM3-213ENST00000602169 WDR62O43379 1518 aa22.87■■□□□ 1.25
CALM3-213ENST00000602169 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
CALM3-213ENST00000602169 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
CALM3-213ENST00000602169 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
CALM3-213ENST00000602169 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
CALM3-213ENST00000602169 CUX1P39880 1505 aa22.75■■□□□ 1.23
CALM3-213ENST00000602169 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
CALM3-213ENST00000602169 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
CALM3-213ENST00000602169 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
CALM3-213ENST00000602169 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
CALM3-213ENST00000602169 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
CALM3-213ENST00000602169 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
CALM3-213ENST00000602169 SOGA1O94964 1423 aa22.56■■□□□ 1.2
CALM3-213ENST00000602169 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
CALM3-213ENST00000602169 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
CALM3-213ENST00000602169 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
CALM3-213ENST00000602169 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
CALM3-213ENST00000602169 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
CALM3-213ENST00000602169 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
CALM3-213ENST00000602169 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
CALM3-213ENST00000602169 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
CALM3-213ENST00000602169 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
CALM3-213ENST00000602169 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
CALM3-213ENST00000602169 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.161e-10■■□□□ 12.6
CALM3-213ENST00000602169 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
CALM3-213ENST00000602169 ABCA5Q8WWZ7 1642 aa22.3■■□□□ 1.16
CALM3-213ENST00000602169 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
CALM3-213ENST00000602169 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
CALM3-213ENST00000602169 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
CALM3-213ENST00000602169 EEA1Q15075 1411 aa22.21■■□□□ 1.15
CALM3-213ENST00000602169 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
CALM3-213ENST00000602169 IGF1RP08069 1367 aa22.18■■□□□ 1.14
CALM3-213ENST00000602169 CHD1O14646 1710 aa22.14■■□□□ 1.14
CALM3-213ENST00000602169 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
CALM3-213ENST00000602169 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
CALM3-213ENST00000602169 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
CALM3-213ENST00000602169 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
CALM3-213ENST00000602169 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
CALM3-213ENST00000602169 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
CALM3-213ENST00000602169 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
CALM3-213ENST00000602169 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
CALM3-213ENST00000602169 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
CALM3-213ENST00000602169 CUL7Q14999 1698 aa22.04■■□□□ 1.12
CALM3-213ENST00000602169 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
CALM3-213ENST00000602169 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
CALM3-213ENST00000602169 FBLN2P98095 1184 aa22.03■■□□□ 1.12
CALM3-213ENST00000602169 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
CALM3-213ENST00000602169 PRXQ9BXM0 1461 aa22■■□□□ 1.11
CALM3-213ENST00000602169 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
CALM3-213ENST00000602169 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
CALM3-213ENST00000602169 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
CALM3-213ENST00000602169 NUP160Q12769 1436 aa21.89■■□□□ 1.1
CALM3-213ENST00000602169 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms