RNA–Protein interactions for RNA: ENST00000343529.9

RELN-201, Transcript of reelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RELN, Length 11,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELN-201ENST00000343529 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
RELN-201ENST00000343529 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
RELN-201ENST00000343529 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
RELN-201ENST00000343529 APLP2Q06481 763 aa16.39■□□□□ 0.21
RELN-201ENST00000343529 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
RELN-201ENST00000343529 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
RELN-201ENST00000343529 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
RELN-201ENST00000343529 ATP1B4Q9UN42 357 aaPredicted RBP15.85■□□□□ 0.13
RELN-201ENST00000343529 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.13
RELN-201ENST00000343529 MYT1LQ9UL68 1186 aa15.76■□□□□ 0.11
RELN-201ENST00000343529 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
RELN-201ENST00000343529 RANGAP1P46060 587 aaPredicted RBP15.58■□□□□ 0.08
RELN-201ENST00000343529 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
RELN-201ENST00000343529 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
RELN-201ENST00000343529 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
RELN-201ENST00000343529 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
RELN-201ENST00000343529 NEFLP07196 543 aa15.37■□□□□ 0.05
RELN-201ENST00000343529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
RELN-201ENST00000343529 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
RELN-201ENST00000343529 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
RELN-201ENST00000343529 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
RELN-201ENST00000343529 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
RELN-201ENST00000343529 PCGF6Q9BYE7 350 aa15.22■□□□□ 0.03
RELN-201ENST00000343529 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
RELN-201ENST00000343529 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
RELN-201ENST00000343529 TRIM41Q8WV44 630 aa15.05■□□□□ -0
RELN-201ENST00000343529 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
RELN-201ENST00000343529 ZEB1P37275 1124 aaPredicted RBP14.96□□□□□ -0.01
RELN-201ENST00000343529 CLSPNQ9HAW4 1339 aa14.93□□□□□ -0.02
RELN-201ENST00000343529 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
RELN-201ENST00000343529 BCANQ96GW7 911 aa14.92□□□□□ -0.02
RELN-201ENST00000343529 MYT1Q01538 1121 aa14.89□□□□□ -0.03
RELN-201ENST00000343529 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
RELN-201ENST00000343529 CNGB1Q14028 1251 aaPredicted RBP14.81□□□□□ -0.04
RELN-201ENST00000343529 ITGAEP38570 1179 aa14.78□□□□□ -0.04
RELN-201ENST00000343529 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
RELN-201ENST00000343529 NEFMP07197 916 aa14.76□□□□□ -0.05
RELN-201ENST00000343529 FBLN2P98095 1184 aa14.59□□□□□ -0.07
RELN-201ENST00000343529 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
RELN-201ENST00000343529 BCL11AQ9H165 835 aa14.53□□□□□ -0.08
RELN-201ENST00000343529 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
RELN-201ENST00000343529 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
RELN-201ENST00000343529 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
RELN-201ENST00000343529 CANXP27824 592 aaKnown RBP14.47□□□□□ -0.09
RELN-201ENST00000343529 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
RELN-201ENST00000343529 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
RELN-201ENST00000343529 NPM2Q86SE8 214 aaKnown RBP14.42□□□□□ -0.1
RELN-201ENST00000343529 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
RELN-201ENST00000343529 A0A0G2JS52 829 aa14.42□□□□□ -0.1
RELN-201ENST00000343529 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
RELN-201ENST00000343529 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
RELN-201ENST00000343529 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
RELN-201ENST00000343529 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.11
RELN-201ENST00000343529 ANP32BQ92688 251 aaKnown RBP14.23□□□□□ -0.13
RELN-201ENST00000343529 HAP1P54257 671 aaPredicted RBP14.21□□□□□ -0.14
RELN-201ENST00000343529 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
RELN-201ENST00000343529 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
RELN-201ENST00000343529 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
RELN-201ENST00000343529 NEUROD1Q13562 356 aa14.13□□□□□ -0.15
RELN-201ENST00000343529 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
RELN-201ENST00000343529 NPHP1O15259 732 aa14.11□□□□□ -0.15
RELN-201ENST00000343529 ANP32CO43423 234 aa14.07□□□□□ -0.16
RELN-201ENST00000343529 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
RELN-201ENST00000343529 UPF2Q9HAU5 1272 aaKnown RBP14.06□□□□□ -0.16
RELN-201ENST00000343529 ZBTB7CA1YPR0 619 aa14.01□□□□□ -0.17
RELN-201ENST00000343529 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
RELN-201ENST00000343529 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
RELN-201ENST00000343529 ARXQ96QS3 562 aa13.99□□□□□ -0.17
RELN-201ENST00000343529 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
RELN-201ENST00000343529 ARID4BQ4LE39 1312 aaPredicted RBP13.96□□□□□ -0.17
RELN-201ENST00000343529 ARID3CA6NKF2 412 aa13.96□□□□□ -0.17
RELN-201ENST00000343529 ABCC9O60706 1549 aa13.93□□□□□ -0.18
RELN-201ENST00000343529 PPP1R15AO75807 674 aaPredicted RBP13.93□□□□□ -0.18
RELN-201ENST00000343529 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
RELN-201ENST00000343529 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
RELN-201ENST00000343529 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
RELN-201ENST00000343529 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
RELN-201ENST00000343529 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
RELN-201ENST00000343529 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
RELN-201ENST00000343529 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
RELN-201ENST00000343529 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
RELN-201ENST00000343529 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
RELN-201ENST00000343529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■□□□□ 9.3
RELN-201ENST00000343529 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
RELN-201ENST00000343529 HRCP23327 699 aa13.78□□□□□ -0.2
RELN-201ENST00000343529 TMX4Q9H1E5 349 aaPredicted RBP13.77□□□□□ -0.21
RELN-201ENST00000343529 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
RELN-201ENST00000343529 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
RELN-201ENST00000343529 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.216e-6■■□□□ 14.2
RELN-201ENST00000343529 CLSTN1O94985 981 aa13.75□□□□□ -0.21
RELN-201ENST00000343529 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
RELN-201ENST00000343529 TSPY4P0CV99 314 aa13.71□□□□□ -0.21
RELN-201ENST00000343529 TSPY10P0CW01 314 aa13.71□□□□□ -0.21
RELN-201ENST00000343529 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
RELN-201ENST00000343529 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
RELN-201ENST00000343529 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
RELN-201ENST00000343529 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
RELN-201ENST00000343529 CASC1Q6TDU7 716 aa13.65□□□□□ -0.23
RELN-201ENST00000343529 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
RELN-201ENST00000343529 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms