RNA–Protein interactions for RNA: ENST00000473172.5

ACSS2-208, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 3

Gene ACSS2, Length 665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-208ENST00000473172 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
ACSS2-208ENST00000473172 ABCC9O60706 1549 aa43.5■■■■■ 4.55
ACSS2-208ENST00000473172 CCDC180Q9P1Z9 1646 aa43.45■■■■■ 4.55
ACSS2-208ENST00000473172 RB1CC1Q8TDY2 1594 aa41.36■■■■■ 4.21
ACSS2-208ENST00000473172 DCAF8L2P0C7V8 631 aa41.17■■■■■ 4.18
ACSS2-208ENST00000473172 NACADO15069 1562 aa41.1■■■■■ 4.17
ACSS2-208ENST00000473172 DNAJC5BQ9UF47 199 aa40.77■■■■■ 4.12
ACSS2-208ENST00000473172 PABPN1Q86U42 306 aaKnown RBP eCLIP40.61■■■■■ 4.091e-5■□□□□ 8.6
ACSS2-208ENST00000473172 MYO15BQ96JP2 1530 aa40.52■■■■■ 4.08
ACSS2-208ENST00000473172 UNC13AQ9UPW8 1703 aa40.44■■■■■ 4.06
ACSS2-208ENST00000473172 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.03
ACSS2-208ENST00000473172 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
ACSS2-208ENST00000473172 DCAF1Q9Y4B6 1507 aa40.06■■■■■ 4
ACSS2-208ENST00000473172 SCRIBQ14160 1630 aa39.72■■■■□ 3.95
ACSS2-208ENST00000473172 SHROOM4Q9ULL8 1493 aa39.52■■■■□ 3.92
ACSS2-208ENST00000473172 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
ACSS2-208ENST00000473172 EIF4G1Q04637 1599 aaKnown RBP39.17■■■■□ 3.86
ACSS2-208ENST00000473172 CECR2Q9BXF3 1484 aa39.14■■■■□ 3.86
ACSS2-208ENST00000473172 NCAPD3P42695 1498 aa37.96■■■■□ 3.67
ACSS2-208ENST00000473172 ATAD2BQ9ULI0 1458 aa37.89■■■■□ 3.66
ACSS2-208ENST00000473172 SMARCA4P51532 1647 aa37.86■■■■□ 3.65
ACSS2-208ENST00000473172 SMARCA2P51531 1590 aa37.75■■■■□ 3.63
ACSS2-208ENST00000473172 BAZ1AQ9NRL2 1556 aaPredicted RBP37.68■■■■□ 3.62
ACSS2-208ENST00000473172 HMGXB3Q12766 1538 aa37.64■■■■□ 3.62
ACSS2-208ENST00000473172 ERCC6Q03468 1493 aa37.53■■■■□ 3.6
ACSS2-208ENST00000473172 BAZ1BQ9UIG0 1483 aaKnown RBP37.52■■■■□ 3.6
ACSS2-208ENST00000473172 MROH2BQ7Z745 1585 aa37.47■■■■□ 3.59
ACSS2-208ENST00000473172 PEG3Q9GZU2 1588 aa37.43■■■■□ 3.58
ACSS2-208ENST00000473172 NESP48681 1621 aa37.4■■■■□ 3.58
ACSS2-208ENST00000473172 CUX2O14529 1486 aa37.34■■■■□ 3.57
ACSS2-208ENST00000473172 DNAJC5Q9H3Z4 198 aa37.3■■■■□ 3.56
ACSS2-208ENST00000473172 LAMC3Q9Y6N6 1575 aa37.06■■■■□ 3.52
ACSS2-208ENST00000473172 WIZO95785 1651 aa37.03■■■■□ 3.52
ACSS2-208ENST00000473172 PDS5BQ9NTI5 1447 aa36.9■■■■□ 3.5
ACSS2-208ENST00000473172 THOC2Q8NI27 1593 aaKnown RBP36.9■■■■□ 3.5
ACSS2-208ENST00000473172 KIF21AQ7Z4S6 1674 aa36.86■■■■□ 3.49
ACSS2-208ENST00000473172 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
ACSS2-208ENST00000473172 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
ACSS2-208ENST00000473172 MRC2Q9UBG0 1479 aa36.56■■■■□ 3.44
ACSS2-208ENST00000473172 TOP2AP11388 1531 aaKnown RBP36.52■■■■□ 3.44
ACSS2-208ENST00000473172 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
ACSS2-208ENST00000473172 WDR62O43379 1518 aa36.43■■■■□ 3.42
ACSS2-208ENST00000473172 CFTRP13569 1480 aa36.43■■■■□ 3.42
ACSS2-208ENST00000473172 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
ACSS2-208ENST00000473172 CCDC88BA6NC98 1476 aa36.18■■■■□ 3.38
ACSS2-208ENST00000473172 URB2Q14146 1524 aaKnown RBP36.13■■■■□ 3.37
ACSS2-208ENST00000473172 PRDM2Q13029 1718 aa36.01■■■■□ 3.36
ACSS2-208ENST00000473172 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
ACSS2-208ENST00000473172 OSCARQ8IYS5 282 aa35.78■■■■□ 3.32
ACSS2-208ENST00000473172 TOPBP1Q92547 1522 aa35.75■■■■□ 3.31
ACSS2-208ENST00000473172 IFT140Q96RY7 1462 aa35.71■■■■□ 3.31
ACSS2-208ENST00000473172 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
ACSS2-208ENST00000473172 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
ACSS2-208ENST00000473172 DNMBPQ6XZF7 1577 aa35.59■■■■□ 3.29
ACSS2-208ENST00000473172 EIF4G3O43432 1585 aaKnown RBP35.42■■■■□ 3.26
ACSS2-208ENST00000473172 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.262e-7■■■■□ 19.5
ACSS2-208ENST00000473172 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
ACSS2-208ENST00000473172 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
ACSS2-208ENST00000473172 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
ACSS2-208ENST00000473172 RAD54L2Q9Y4B4 1467 aa35.32■■■■□ 3.24
ACSS2-208ENST00000473172 SOGA1O94964 1423 aa35.28■■■■□ 3.24
ACSS2-208ENST00000473172 FBLN2P98095 1184 aa35.23■■■■□ 3.23
ACSS2-208ENST00000473172 RIMBP3CA6NJZ7 1639 aa35.23■■■■□ 3.23
ACSS2-208ENST00000473172 RIMBP3BA6NNM3 1639 aa35.23■■■■□ 3.23
ACSS2-208ENST00000473172 RIMBP3Q9UFD9 1639 aa35.23■■■■□ 3.23
ACSS2-208ENST00000473172 TDRD9Q8NDG6 1382 aaKnown RBP35.22■■■■□ 3.23
ACSS2-208ENST00000473172 FGD5Q6ZNL6 1462 aa35.2■■■■□ 3.23
ACSS2-208ENST00000473172 CUX1P39880 1505 aa35.18■■■■□ 3.22
ACSS2-208ENST00000473172 CHD1O14646 1710 aa35.17■■■■□ 3.22
ACSS2-208ENST00000473172 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
ACSS2-208ENST00000473172 SNAPC4Q5SXM2 1469 aa35■■■■□ 3.19
ACSS2-208ENST00000473172 CYB5RLQ6IPT4 315 aa34.99■■■■□ 3.19
ACSS2-208ENST00000473172 WDR97A6NE52 1622 aa34.96■■■■□ 3.19
ACSS2-208ENST00000473172 CHMP7Q8WUX9 453 aaPredicted RBP34.94■■■■□ 3.18
ACSS2-208ENST00000473172 GRIN2BQ13224 1484 aa34.91■■■■□ 3.18
ACSS2-208ENST00000473172 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
ACSS2-208ENST00000473172 GAPVD1Q14C86 1478 aa34.83■■■■□ 3.17
ACSS2-208ENST00000473172 ARAP1Q96P48 1450 aa34.8■■■■□ 3.16
ACSS2-208ENST00000473172 ABCA10Q8WWZ4 1543 aa34.77■■■■□ 3.16
ACSS2-208ENST00000473172 SYNJ2O15056 1496 aa34.77■■■■□ 3.16
ACSS2-208ENST00000473172 PBRM1Q86U86 1689 aa34.76■■■■□ 3.15
ACSS2-208ENST00000473172 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
ACSS2-208ENST00000473172 CLASP1Q7Z460 1538 aa34.74■■■■□ 3.15
ACSS2-208ENST00000473172 WRNQ14191 1432 aaPredicted RBP eCLIP34.69■■■■□ 3.14
ACSS2-208ENST00000473172 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
ACSS2-208ENST00000473172 TOP2BQ02880 1626 aa34.62■■■■□ 3.13
ACSS2-208ENST00000473172 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
ACSS2-208ENST00000473172 TRHP20396 242 aaPredicted RBP34.57■■■■□ 3.12
ACSS2-208ENST00000473172 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
ACSS2-208ENST00000473172 ADAMTS12P58397 1594 aa34.42■■■■□ 3.1
ACSS2-208ENST00000473172 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
ACSS2-208ENST00000473172 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
ACSS2-208ENST00000473172 NUP160Q12769 1436 aa34.32■■■■□ 3.08
ACSS2-208ENST00000473172 ERICH3Q5RHP9 1530 aa34.32■■■■□ 3.08
ACSS2-208ENST00000473172 ERCC6L2Q5T890 1561 aa34.28■■■■□ 3.08
ACSS2-208ENST00000473172 SHROOM2Q13796 1616 aa34.13■■■■□ 3.05
ACSS2-208ENST00000473172 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
ACSS2-208ENST00000473172 PRG4Q92954 1404 aaPredicted RBP34.04■■■■□ 3.04
ACSS2-208ENST00000473172 IGF1RP08069 1367 aa34■■■■□ 3.03
ACSS2-208ENST00000473172 KIF27Q86VH2 1401 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms