RNA–Protein interactions for RNA: ENST00000394884.7

CDC23-201, Transcript of cell division cycle 23, humanhuman

TSL 1 (best) BASIC

Gene CDC23, Length 1,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-201ENST00000394884 AEBP2Q6ZN18 517 aaPredicted RBP34.62■■■■□ 3.13
CDC23-201ENST00000394884 CHIC1Q5VXU3 224 aa33.23■■■□□ 2.91
CDC23-201ENST00000394884 SENP3Q9H4L4 574 aaPredicted RBP29.58■■■□□ 2.33
CDC23-201ENST00000394884 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
CDC23-201ENST00000394884 FOXD1Q16676 465 aa27.46■■□□□ 1.99
CDC23-201ENST00000394884 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
CDC23-201ENST00000394884 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
CDC23-201ENST00000394884 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
CDC23-201ENST00000394884 ADRA2BP18089 450 aa25.84■■□□□ 1.73
CDC23-201ENST00000394884 PIAS4Q8N2W9 510 aaPredicted RBP25.78■■□□□ 1.72
CDC23-201ENST00000394884 MSH5O43196 834 aa25.66■■□□□ 1.7
CDC23-201ENST00000394884 ABCC9O60706 1549 aa25.48■■□□□ 1.67
CDC23-201ENST00000394884 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
CDC23-201ENST00000394884 POTEDQ86YR6 584 aa24.44■■□□□ 1.5
CDC23-201ENST00000394884 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
CDC23-201ENST00000394884 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
CDC23-201ENST00000394884 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
CDC23-201ENST00000394884 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
CDC23-201ENST00000394884 MAPK8IP2Q13387 824 aaPredicted RBP23.62■■□□□ 1.37
CDC23-201ENST00000394884 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
CDC23-201ENST00000394884 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
CDC23-201ENST00000394884 PPP4R3CPQ6ZMV5 832 aa23.44■■□□□ 1.34
CDC23-201ENST00000394884 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
CDC23-201ENST00000394884 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
CDC23-201ENST00000394884 NACADO15069 1562 aa22.97■■□□□ 1.27
CDC23-201ENST00000394884 CNKSR2Q8WXI2 1034 aa22.96■■□□□ 1.27
CDC23-201ENST00000394884 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
CDC23-201ENST00000394884 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
CDC23-201ENST00000394884 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
CDC23-201ENST00000394884 HOXD11P31277 338 aaPredicted RBP22.74■■□□□ 1.23
CDC23-201ENST00000394884 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
CDC23-201ENST00000394884 RNF216Q9NWF9 866 aaPredicted RBP22.68■■□□□ 1.22
CDC23-201ENST00000394884 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
CDC23-201ENST00000394884 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
CDC23-201ENST00000394884 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
CDC23-201ENST00000394884 CUX2O14529 1486 aa22.38■■□□□ 1.17
CDC23-201ENST00000394884 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
CDC23-201ENST00000394884 NPM3O75607 178 aaKnown RBP22.3■■□□□ 1.16
CDC23-201ENST00000394884 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
CDC23-201ENST00000394884 KCNA4P22459 653 aa22.13■■□□□ 1.13
CDC23-201ENST00000394884 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
CDC23-201ENST00000394884 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
CDC23-201ENST00000394884 RNF39Q9H2S5 420 aa21.88■■□□□ 1.09
CDC23-201ENST00000394884 CACNB1Q02641 598 aaPredicted RBP21.81■■□□□ 1.08
CDC23-201ENST00000394884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.06
CDC23-201ENST00000394884 C1QBPQ07021 282 aaKnown RBP21.62■■□□□ 1.05
CDC23-201ENST00000394884 NESP48681 1621 aa21.5■■□□□ 1.03
CDC23-201ENST00000394884 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
CDC23-201ENST00000394884 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
CDC23-201ENST00000394884 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
CDC23-201ENST00000394884 NCAPD3P42695 1498 aa21.32■■□□□ 1
CDC23-201ENST00000394884 OSCARQ8IYS5 282 aa21.31■■□□□ 1
CDC23-201ENST00000394884 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
CDC23-201ENST00000394884 U3KPZ7 1027 aaPredicted RBP21.23■□□□□ 0.99
CDC23-201ENST00000394884 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
CDC23-201ENST00000394884 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
CDC23-201ENST00000394884 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
CDC23-201ENST00000394884 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
CDC23-201ENST00000394884 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
CDC23-201ENST00000394884 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
CDC23-201ENST00000394884 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
CDC23-201ENST00000394884 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
CDC23-201ENST00000394884 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
CDC23-201ENST00000394884 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
CDC23-201ENST00000394884 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
CDC23-201ENST00000394884 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
CDC23-201ENST00000394884 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
CDC23-201ENST00000394884 ILDR1Q86SU0 546 aaPredicted RBP20.9■□□□□ 0.94
CDC23-201ENST00000394884 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
CDC23-201ENST00000394884 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
CDC23-201ENST00000394884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.93
CDC23-201ENST00000394884 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.93
CDC23-201ENST00000394884 CAPN15O75808 1086 aa20.82■□□□□ 0.92
CDC23-201ENST00000394884 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
CDC23-201ENST00000394884 WDR62O43379 1518 aa20.8■□□□□ 0.92
CDC23-201ENST00000394884 APLP2Q06481 763 aa20.8■□□□□ 0.92
CDC23-201ENST00000394884 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
CDC23-201ENST00000394884 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
CDC23-201ENST00000394884 MYCNP04198 464 aaPredicted RBP20.66■□□□□ 0.9
CDC23-201ENST00000394884 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
CDC23-201ENST00000394884 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
CDC23-201ENST00000394884 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
CDC23-201ENST00000394884 DSG3P32926 999 aa20.59■□□□□ 0.89
CDC23-201ENST00000394884 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
CDC23-201ENST00000394884 ZNF219Q9P2Y4 722 aaPredicted RBP20.56■□□□□ 0.88
CDC23-201ENST00000394884 CEP164Q9UPV0 1460 aa20.52■□□□□ 0.88
CDC23-201ENST00000394884 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
CDC23-201ENST00000394884 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
CDC23-201ENST00000394884 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
CDC23-201ENST00000394884 ABCB7O75027 752 aa20.33■□□□□ 0.85
CDC23-201ENST00000394884 ZBTB22O15209 634 aa20.32■□□□□ 0.84
CDC23-201ENST00000394884 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
CDC23-201ENST00000394884 FBLN2P98095 1184 aa20.28■□□□□ 0.84
CDC23-201ENST00000394884 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
CDC23-201ENST00000394884 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
CDC23-201ENST00000394884 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
CDC23-201ENST00000394884 KDM4FA0A1W2PPD8 638 aa20.1■□□□□ 0.81
CDC23-201ENST00000394884 CFTRP13569 1480 aa20.08■□□□□ 0.81
CDC23-201ENST00000394884 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
CDC23-201ENST00000394884 POLA2Q14181 598 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms