RNA–Protein interactions for RNA: ENST00000525933.1

RPS3-205, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-205ENST00000525933 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
RPS3-205ENST00000525933 ABCC9O60706 1549 aa24.96■■□□□ 1.59
RPS3-205ENST00000525933 CCDC180Q9P1Z9 1646 aa24.37■■□□□ 1.49
RPS3-205ENST00000525933 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
RPS3-205ENST00000525933 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
RPS3-205ENST00000525933 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
RPS3-205ENST00000525933 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
RPS3-205ENST00000525933 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
RPS3-205ENST00000525933 NACADO15069 1562 aa23.14■■□□□ 1.29
RPS3-205ENST00000525933 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
RPS3-205ENST00000525933 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
RPS3-205ENST00000525933 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
RPS3-205ENST00000525933 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
RPS3-205ENST00000525933 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
RPS3-205ENST00000525933 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
RPS3-205ENST00000525933 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
RPS3-205ENST00000525933 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
RPS3-205ENST00000525933 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
RPS3-205ENST00000525933 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
RPS3-205ENST00000525933 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
RPS3-205ENST00000525933 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
RPS3-205ENST00000525933 CUX2O14529 1486 aa21.68■■□□□ 1.06
RPS3-205ENST00000525933 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
RPS3-205ENST00000525933 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
RPS3-205ENST00000525933 NESP48681 1621 aa21.31■■□□□ 1
RPS3-205ENST00000525933 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
RPS3-205ENST00000525933 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
RPS3-205ENST00000525933 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
RPS3-205ENST00000525933 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
RPS3-205ENST00000525933 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
RPS3-205ENST00000525933 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
RPS3-205ENST00000525933 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
RPS3-205ENST00000525933 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
RPS3-205ENST00000525933 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
RPS3-205ENST00000525933 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
RPS3-205ENST00000525933 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
RPS3-205ENST00000525933 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
RPS3-205ENST00000525933 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
RPS3-205ENST00000525933 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
RPS3-205ENST00000525933 WDR62O43379 1518 aa20.72■□□□□ 0.91
RPS3-205ENST00000525933 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
RPS3-205ENST00000525933 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
RPS3-205ENST00000525933 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
RPS3-205ENST00000525933 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
RPS3-205ENST00000525933 WIZO95785 1651 aa20.5■□□□□ 0.87
RPS3-205ENST00000525933 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
RPS3-205ENST00000525933 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
RPS3-205ENST00000525933 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
RPS3-205ENST00000525933 FANCD2Q9BXW9 1451 aa20.47■□□□□ 0.87
RPS3-205ENST00000525933 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
RPS3-205ENST00000525933 URB2Q14146 1524 aaKnown RBP20.38■□□□□ 0.85
RPS3-205ENST00000525933 CFTRP13569 1480 aa20.33■□□□□ 0.84
RPS3-205ENST00000525933 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
RPS3-205ENST00000525933 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
RPS3-205ENST00000525933 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
RPS3-205ENST00000525933 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
RPS3-205ENST00000525933 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
RPS3-205ENST00000525933 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
RPS3-205ENST00000525933 CHD1O14646 1710 aa20.12■□□□□ 0.81
RPS3-205ENST00000525933 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
RPS3-205ENST00000525933 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
RPS3-205ENST00000525933 ARAP1Q96P48 1450 aa20.08■□□□□ 0.8
RPS3-205ENST00000525933 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
RPS3-205ENST00000525933 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
RPS3-205ENST00000525933 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.793e-8■■■■■ 35.7
RPS3-205ENST00000525933 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
RPS3-205ENST00000525933 FBLN2P98095 1184 aa19.92■□□□□ 0.78
RPS3-205ENST00000525933 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
RPS3-205ENST00000525933 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
RPS3-205ENST00000525933 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
RPS3-205ENST00000525933 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
RPS3-205ENST00000525933 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
RPS3-205ENST00000525933 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
RPS3-205ENST00000525933 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
RPS3-205ENST00000525933 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
RPS3-205ENST00000525933 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
RPS3-205ENST00000525933 SOGA1O94964 1423 aa19.67■□□□□ 0.74
RPS3-205ENST00000525933 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
RPS3-205ENST00000525933 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
RPS3-205ENST00000525933 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
RPS3-205ENST00000525933 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
RPS3-205ENST00000525933 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
RPS3-205ENST00000525933 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
RPS3-205ENST00000525933 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
RPS3-205ENST00000525933 GRIN2BQ13224 1484 aa19.55■□□□□ 0.72
RPS3-205ENST00000525933 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
RPS3-205ENST00000525933 CUX1P39880 1505 aa19.49■□□□□ 0.71
RPS3-205ENST00000525933 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
RPS3-205ENST00000525933 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
RPS3-205ENST00000525933 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
RPS3-205ENST00000525933 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
RPS3-205ENST00000525933 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
RPS3-205ENST00000525933 SHROOM2Q13796 1616 aa19.3■□□□□ 0.68
RPS3-205ENST00000525933 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
RPS3-205ENST00000525933 NUP160Q12769 1436 aa19.26■□□□□ 0.67
RPS3-205ENST00000525933 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
RPS3-205ENST00000525933 KDM4FA0A1W2PPD8 638 aa19.19■□□□□ 0.66
RPS3-205ENST00000525933 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
RPS3-205ENST00000525933 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
RPS3-205ENST00000525933 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms