Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 DUX4L9-201ENST00000449051 1259 ntBASIC21.81■■□□□ 1.08
CLDN20P56880 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLDN20P56880 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN20P56880 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN20P56880 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN20P56880 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLDN20P56880 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN20P56880 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLDN20P56880 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLDN20P56880 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN20P56880 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CLDN20P56880 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN20P56880 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN20P56880 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLDN20P56880 TSPY13P-201ENST00000338964 914 ntBASIC21.79■■□□□ 1.08
CLDN20P56880 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 DUX4L18-201ENST00000553347 1267 ntBASIC21.79■■□□□ 1.08
CLDN20P56880 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLDN20P56880 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN20P56880 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN20P56880 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN20P56880 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN20P56880 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN20P56880 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.78■■□□□ 1.08
CLDN20P56880 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN20P56880 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN20P56880 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN20P56880 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN20P56880 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN20P56880 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN20P56880 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CLDN20P56880 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN20P56880 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN20P56880 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN20P56880 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN20P56880 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN20P56880 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN20P56880 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN20P56880 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN20P56880 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN20P56880 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN20P56880 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN20P56880 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLDN20P56880 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLDN20P56880 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.73■■□□□ 1.07
CLDN20P56880 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.73■■□□□ 1.07
CLDN20P56880 AC018755.3-202ENST00000596210 929 ntBASIC21.73■■□□□ 1.07
CLDN20P56880 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN20P56880 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN20P56880 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN20P56880 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN20P56880 MIR6765-201ENST00000614092 87 ntBASIC21.72■■□□□ 1.07
CLDN20P56880 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN20P56880 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN20P56880 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN20P56880 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN20P56880 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN20P56880 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLDN20P56880 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
CLDN20P56880 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN20P56880 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CLDN20P56880 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLDN20P56880 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN20P56880 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN20P56880 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN20P56880 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN20P56880 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN20P56880 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CLDN20P56880 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN20P56880 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN20P56880 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN20P56880 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms