RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 NISCHQ9Y2I1 1504 aa59.47■■■■■ 7.11
RSPO4-202ENST00000400634 CCDC180Q9P1Z9 1646 aa53.18■■■■■ 6.1
RSPO4-202ENST00000400634 ABCC9O60706 1549 aa52.35■■■■■ 5.97
RSPO4-202ENST00000400634 RB1CC1Q8TDY2 1594 aa50.26■■■■■ 5.64
RSPO4-202ENST00000400634 NACADO15069 1562 aa50.09■■■■■ 5.61
RSPO4-202ENST00000400634 DCAF8L2P0C7V8 631 aa49.83■■■■■ 5.57
RSPO4-202ENST00000400634 MYO15BQ96JP2 1530 aa49.64■■■■■ 5.54
RSPO4-202ENST00000400634 ZCCHC6Q5VYS8 1495 aaKnown RBP49.44■■■■■ 5.5
RSPO4-202ENST00000400634 DCAF1Q9Y4B6 1507 aa49.24■■■■■ 5.47
RSPO4-202ENST00000400634 UNC13AQ9UPW8 1703 aa49.13■■■■■ 5.46
RSPO4-202ENST00000400634 PABPN1Q86U42 306 aaKnown RBP eCLIP48.8■■■■■ 5.4
RSPO4-202ENST00000400634 BICRAQ9NZM4 1560 aa48.68■■■■■ 5.38
RSPO4-202ENST00000400634 DNAJC5BQ9UF47 199 aa48.41■■■■■ 5.34
RSPO4-202ENST00000400634 SCRIBQ14160 1630 aa48.39■■■■■ 5.34
RSPO4-202ENST00000400634 SHROOM4Q9ULL8 1493 aa48.23■■■■■ 5.31
RSPO4-202ENST00000400634 EIF4G1Q04637 1599 aaKnown RBP47.46■■■■■ 5.19
RSPO4-202ENST00000400634 CC2D2AQ9P2K1 1620 aa47.39■■■■■ 5.18
RSPO4-202ENST00000400634 CECR2Q9BXF3 1484 aa47.14■■■■■ 5.14
RSPO4-202ENST00000400634 SMARCA4P51532 1647 aa46.27■■■■■ 5
RSPO4-202ENST00000400634 NCAPD3P42695 1498 aa46.17■■■■■ 4.98
RSPO4-202ENST00000400634 BAZ1AQ9NRL2 1556 aaPredicted RBP46.17■■■■■ 4.98
RSPO4-202ENST00000400634 ATAD2BQ9ULI0 1458 aa46.11■■■■■ 4.97
RSPO4-202ENST00000400634 SMARCA2P51531 1590 aa46.09■■■■■ 4.97
RSPO4-202ENST00000400634 HMGXB3Q12766 1538 aa45.94■■■■■ 4.95
RSPO4-202ENST00000400634 PEG3Q9GZU2 1588 aa45.84■■■■■ 4.93
RSPO4-202ENST00000400634 MROH2BQ7Z745 1585 aa45.78■■■■■ 4.92
RSPO4-202ENST00000400634 BAZ1BQ9UIG0 1483 aaKnown RBP45.73■■■■■ 4.91
RSPO4-202ENST00000400634 WIZO95785 1651 aa45.3■■■■■ 4.84
RSPO4-202ENST00000400634 ERCC6Q03468 1493 aa45.23■■■■■ 4.83
RSPO4-202ENST00000400634 NESP48681 1621 aa45.15■■■■■ 4.82
RSPO4-202ENST00000400634 RSF1Q96T23 1441 aaPredicted RBP45.09■■■■■ 4.81
RSPO4-202ENST00000400634 LAMC3Q9Y6N6 1575 aa45.08■■■■■ 4.81
RSPO4-202ENST00000400634 CUX2O14529 1486 aa44.95■■■■■ 4.79
RSPO4-202ENST00000400634 TOP2AP11388 1531 aaKnown RBP44.8■■■■■ 4.76
RSPO4-202ENST00000400634 CADPSQ9ULU8 1353 aa44.8■■■■■ 4.76
RSPO4-202ENST00000400634 PDS5BQ9NTI5 1447 aa44.78■■■■■ 4.76
RSPO4-202ENST00000400634 KIF21AQ7Z4S6 1674 aa44.69■■■■■ 4.74
RSPO4-202ENST00000400634 THOC2Q8NI27 1593 aaKnown RBP44.64■■■■■ 4.74
RSPO4-202ENST00000400634 CFTRP13569 1480 aa44.43■■■■■ 4.7
RSPO4-202ENST00000400634 MRC2Q9UBG0 1479 aa44.32■■■■■ 4.69
RSPO4-202ENST00000400634 CEP164Q9UPV0 1460 aa44.3■■■■■ 4.68
RSPO4-202ENST00000400634 FANCD2Q9BXW9 1451 aa44.27■■■■■ 4.68
RSPO4-202ENST00000400634 CCDC88BA6NC98 1476 aa44.24■■■■■ 4.67
RSPO4-202ENST00000400634 WDR62O43379 1518 aa44.2■■■■■ 4.67
RSPO4-202ENST00000400634 PRDM2Q13029 1718 aa44.19■■■■■ 4.67
RSPO4-202ENST00000400634 DNAJC5Q9H3Z4 198 aa44.07■■■■■ 4.65
RSPO4-202ENST00000400634 URB2Q14146 1524 aaKnown RBP43.83■■■■■ 4.61
RSPO4-202ENST00000400634 ABCC8Q09428 1581 aa43.57■■■■■ 4.57
RSPO4-202ENST00000400634 SUPT5HO00267 1087 aaKnown RBP43.56■■■■■ 4.56
RSPO4-202ENST00000400634 TOPBP1Q92547 1522 aa43.52■■■■■ 4.56
RSPO4-202ENST00000400634 DNMBPQ6XZF7 1577 aa43.46■■■■■ 4.55
RSPO4-202ENST00000400634 IFT140Q96RY7 1462 aa43.38■■■■■ 4.54
RSPO4-202ENST00000400634 ZNF608Q9ULD9 1512 aaPredicted RBP43.17■■■■■ 4.5
RSPO4-202ENST00000400634 POLA1P09884 1462 aaPredicted RBP43.11■■■■■ 4.49
RSPO4-202ENST00000400634 TARBP1Q13395 1621 aaKnown RBP43.09■■■■■ 4.49
RSPO4-202ENST00000400634 EIF4G3O43432 1585 aaKnown RBP43.04■■■■■ 4.48
RSPO4-202ENST00000400634 CUX1P39880 1505 aa42.99■■■■■ 4.47
RSPO4-202ENST00000400634 OSCARQ8IYS5 282 aa42.97■■■■■ 4.47
RSPO4-202ENST00000400634 FGD5Q6ZNL6 1462 aa42.94■■■■■ 4.46
RSPO4-202ENST00000400634 SOGA1O94964 1423 aa42.93■■■■■ 4.46
RSPO4-202ENST00000400634 RAD54L2Q9Y4B4 1467 aa42.89■■■■■ 4.46
RSPO4-202ENST00000400634 AQRO60306 1485 aaKnown RBP eCLIP42.87■■■■■ 4.45
RSPO4-202ENST00000400634 WDR97A6NE52 1622 aa42.82■■■■■ 4.44
RSPO4-202ENST00000400634 TDRD9Q8NDG6 1382 aaKnown RBP42.7■■■■■ 4.43
RSPO4-202ENST00000400634 CHD1O14646 1710 aa42.63■■■■■ 4.41
RSPO4-202ENST00000400634 BIVM-ERCC5R4GMW8 1640 aa42.57■■■■■ 4.4
RSPO4-202ENST00000400634 WRNQ14191 1432 aaPredicted RBP eCLIP42.56■■■■■ 4.4
RSPO4-202ENST00000400634 TOP2BQ02880 1626 aa42.55■■■■■ 4.4
RSPO4-202ENST00000400634 ABCA10Q8WWZ4 1543 aa42.52■■■■■ 4.4
RSPO4-202ENST00000400634 GRIN2BQ13224 1484 aa42.5■■■■■ 4.39
RSPO4-202ENST00000400634 SNAPC4Q5SXM2 1469 aa42.49■■■■■ 4.39
RSPO4-202ENST00000400634 MAGI1Q96QZ7 1491 aaPredicted RBP42.48■■■■■ 4.39
RSPO4-202ENST00000400634 SYNJ1O43426 1573 aa42.47■■■■■ 4.39
RSPO4-202ENST00000400634 FBLN2P98095 1184 aa42.46■■■■■ 4.39
RSPO4-202ENST00000400634 GAPVD1Q14C86 1478 aa42.44■■■■■ 4.38
RSPO4-202ENST00000400634 PBRM1Q86U86 1689 aa42.44■■■■■ 4.38
RSPO4-202ENST00000400634 ABCA5Q8WWZ7 1642 aa42.4■■■■■ 4.38
RSPO4-202ENST00000400634 TRIM41Q8WV44 630 aa42.38■■■■■ 4.37
RSPO4-202ENST00000400634 RIMBP3CA6NJZ7 1639 aa42.34■■■■■ 4.37
RSPO4-202ENST00000400634 RIMBP3BA6NNM3 1639 aa42.34■■■■■ 4.37
RSPO4-202ENST00000400634 RIMBP3Q9UFD9 1639 aa42.34■■■■■ 4.37
RSPO4-202ENST00000400634 CHMP7Q8WUX9 453 aaPredicted RBP42.31■■■■■ 4.36
RSPO4-202ENST00000400634 SYNJ2O15056 1496 aa42.3■■■■■ 4.36
RSPO4-202ENST00000400634 ARHGEF11O15085 1522 aa42.26■■■■■ 4.36
RSPO4-202ENST00000400634 CLASP1Q7Z460 1538 aa42.11■■■■■ 4.33
RSPO4-202ENST00000400634 ERICH3Q5RHP9 1530 aa42.04■■■■■ 4.32
RSPO4-202ENST00000400634 ADAMTS12P58397 1594 aa42.03■■■■■ 4.32
RSPO4-202ENST00000400634 GRIN2AQ12879 1464 aa41.95■■■■■ 4.31
RSPO4-202ENST00000400634 FHAD1B1AJZ9 1412 aa41.94■■■■■ 4.3
RSPO4-202ENST00000400634 CYB5RLQ6IPT4 315 aa41.87■■■■■ 4.29
RSPO4-202ENST00000400634 ARAP1Q96P48 1450 aa41.86■■■■■ 4.29
RSPO4-202ENST00000400634 NUP160Q12769 1436 aa41.78■■■■■ 4.28
RSPO4-202ENST00000400634 CEP170Q5SW79 1584 aa41.75■■■■■ 4.27
RSPO4-202ENST00000400634 KIF27Q86VH2 1401 aa41.73■■■■■ 4.27
RSPO4-202ENST00000400634 CUL7Q14999 1698 aa41.59■■■■■ 4.25
RSPO4-202ENST00000400634 IGF1RP08069 1367 aa41.57■■■■■ 4.25
RSPO4-202ENST00000400634 SHROOM2Q13796 1616 aa41.55■■■■■ 4.24
RSPO4-202ENST00000400634 ERCC6L2Q5T890 1561 aa41.42■■■■■ 4.22
RSPO4-202ENST00000400634 RUSC2Q8N2Y8 1516 aa41.42■■■■■ 4.22
RSPO4-202ENST00000400634 JPH4Q96JJ6 628 aa41.34■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms