RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 NISCHQ9Y2I1 1504 aa42.08■■■■■ 4.33
CUEDC1-202ENST00000407144 HRCP23327 699 aa38.03■■■■□ 3.68
CUEDC1-202ENST00000407144 PELP1Q8IZL8 1130 aaKnown RBP37.8■■■■□ 3.64
CUEDC1-202ENST00000407144 CCDC180Q9P1Z9 1646 aa37.2■■■■□ 3.55
CUEDC1-202ENST00000407144 PPARGC1BQ86YN6 1023 aaKnown RBP36.77■■■■□ 3.48
CUEDC1-202ENST00000407144 PCGF6Q9BYE7 350 aa36.68■■■■□ 3.46
CUEDC1-202ENST00000407144 MYT1Q01538 1121 aa36.63■■■■□ 3.45
CUEDC1-202ENST00000407144 MYO15BQ96JP2 1530 aa36.41■■■■□ 3.42
CUEDC1-202ENST00000407144 ABCC9O60706 1549 aa36.25■■■■□ 3.39
CUEDC1-202ENST00000407144 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
CUEDC1-202ENST00000407144 SUPT5HO00267 1087 aaKnown RBP36.16■■■■□ 3.38
CUEDC1-202ENST00000407144 CHIC1Q5VXU3 224 aa36.11■■■■□ 3.37
CUEDC1-202ENST00000407144 SCAF1Q9H7N4 1312 aaKnown RBP36.09■■■■□ 3.37
CUEDC1-202ENST00000407144 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
CUEDC1-202ENST00000407144 ZEB1P37275 1124 aaPredicted RBP35.81■■■■□ 3.32
CUEDC1-202ENST00000407144 TRIM26Q12899 539 aaPredicted RBP35.71■■■■□ 3.31
CUEDC1-202ENST00000407144 ACIN1Q9UKV3 1341 aaKnown RBP35.2■■■■□ 3.23
CUEDC1-202ENST00000407144 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
CUEDC1-202ENST00000407144 DCAF8L2P0C7V8 631 aa35.12■■■■□ 3.21
CUEDC1-202ENST00000407144 LOC105371045A0A1W2PR82 267 aa35.03■■■■□ 3.2
CUEDC1-202ENST00000407144 NEUROD1Q13562 356 aa34.9■■■■□ 3.18
CUEDC1-202ENST00000407144 NACADO15069 1562 aa34.87■■■■□ 3.17
CUEDC1-202ENST00000407144 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
CUEDC1-202ENST00000407144 GTF3C3Q9Y5Q9 886 aa34.76■■■■□ 3.16
CUEDC1-202ENST00000407144 CENPBP07199 599 aaPredicted RBP34.74■■■■□ 3.15
CUEDC1-202ENST00000407144 TTBK1Q5TCY1 1321 aaPredicted RBP34.61■■■■□ 3.13
CUEDC1-202ENST00000407144 UNC13AQ9UPW8 1703 aa34.29■■■■□ 3.08
CUEDC1-202ENST00000407144 DIEXFQ68CQ4 756 aaKnown RBP34.23■■■■□ 3.07
CUEDC1-202ENST00000407144 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
CUEDC1-202ENST00000407144 PABPN1Q86U42 306 aaKnown RBP eCLIP33.96■■■■□ 3.03
CUEDC1-202ENST00000407144 BICRAQ9NZM4 1560 aa33.93■■■■□ 3.02
CUEDC1-202ENST00000407144 CCER1Q8TC90 406 aaPredicted RBP33.87■■■■□ 3.01
CUEDC1-202ENST00000407144 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
CUEDC1-202ENST00000407144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.78■■■■□ 3
CUEDC1-202ENST00000407144 BCL11AQ9H165 835 aa33.67■■■□□ 2.98
CUEDC1-202ENST00000407144 ZNF316A6NFI3 1004 aaPredicted RBP33.56■■■□□ 2.96
CUEDC1-202ENST00000407144 ANP32EQ9BTT0 268 aa33.51■■■□□ 2.95
CUEDC1-202ENST00000407144 CLSPNQ9HAW4 1339 aa33.51■■■□□ 2.95
CUEDC1-202ENST00000407144 YTHDC1Q96MU7 727 aaKnown RBP33.38■■■□□ 2.93
CUEDC1-202ENST00000407144 FAM9AQ8IZU1 332 aaPredicted RBP33.34■■■□□ 2.93
CUEDC1-202ENST00000407144 MIER1Q8N108 512 aa33.23■■■□□ 2.91
CUEDC1-202ENST00000407144 TSHZ2Q9NRE2 1034 aa33.09■■■□□ 2.89
CUEDC1-202ENST00000407144 SUPT16HQ9Y5B9 1047 aaKnown RBP33.08■■■□□ 2.89
CUEDC1-202ENST00000407144 RSF1Q96T23 1441 aaPredicted RBP33.08■■■□□ 2.89
CUEDC1-202ENST00000407144 DNAJC5BQ9UF47 199 aa33.06■■■□□ 2.88
CUEDC1-202ENST00000407144 WRNQ14191 1432 aaPredicted RBP eCLIP33.05■■■□□ 2.88
CUEDC1-202ENST00000407144 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
CUEDC1-202ENST00000407144 CSRNP3Q8WYN3 585 aa32.96■■■□□ 2.87
CUEDC1-202ENST00000407144 EHMT2Q96KQ7 1210 aa32.89■■■□□ 2.86
CUEDC1-202ENST00000407144 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
CUEDC1-202ENST00000407144 CC2D2AQ9P2K1 1620 aa32.78■■■□□ 2.84
CUEDC1-202ENST00000407144 PRKCSHP14314 528 aaPredicted RBP32.63■■■□□ 2.81
CUEDC1-202ENST00000407144 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
CUEDC1-202ENST00000407144 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
CUEDC1-202ENST00000407144 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
CUEDC1-202ENST00000407144 CEP162Q5TB80 1403 aa32.48■■■□□ 2.79
CUEDC1-202ENST00000407144 TNIKQ9UKE5 1360 aa32.36■■■□□ 2.77
CUEDC1-202ENST00000407144 ATAD2BQ9ULI0 1458 aa32.33■■■□□ 2.77
CUEDC1-202ENST00000407144 ERICH6Q7L0X2 663 aa32.31■■■□□ 2.76
CUEDC1-202ENST00000407144 RBM19Q9Y4C8 960 aaKnown RBP32.25■■■□□ 2.75
CUEDC1-202ENST00000407144 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
CUEDC1-202ENST00000407144 PEG3Q9GZU2 1588 aa32.23■■■□□ 2.75
CUEDC1-202ENST00000407144 WIZO95785 1651 aa32.22■■■□□ 2.75
CUEDC1-202ENST00000407144 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
CUEDC1-202ENST00000407144 MYT1LQ9UL68 1186 aa32.08■■■□□ 2.73
CUEDC1-202ENST00000407144 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
CUEDC1-202ENST00000407144 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
CUEDC1-202ENST00000407144 HNRNPUL2Q1KMD3 747 aaKnown RBP32.05■■■□□ 2.72
CUEDC1-202ENST00000407144 EEA1Q15075 1411 aa32.03■■■□□ 2.72
CUEDC1-202ENST00000407144 FKBP8Q14318 412 aa31.98■■■□□ 2.71
CUEDC1-202ENST00000407144 MSH5O43196 834 aa31.95■■■□□ 2.71
CUEDC1-202ENST00000407144 FANCIQ9NVI1 1328 aa31.94■■■□□ 2.7
CUEDC1-202ENST00000407144 BCANQ96GW7 911 aa31.94■■■□□ 2.7
CUEDC1-202ENST00000407144 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
CUEDC1-202ENST00000407144 GOLGA3Q08378 1498 aa31.84■■■□□ 2.69
CUEDC1-202ENST00000407144 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
CUEDC1-202ENST00000407144 DHX57Q6P158 1386 aaKnown RBP31.83■■■□□ 2.69
CUEDC1-202ENST00000407144 NEFLP07196 543 aa31.83■■■□□ 2.69
CUEDC1-202ENST00000407144 APLP2Q06481 763 aa31.83■■■□□ 2.69
CUEDC1-202ENST00000407144 TOP2AP11388 1531 aaKnown RBP31.77■■■□□ 2.68
CUEDC1-202ENST00000407144 SOGA1O94964 1423 aa31.76■■■□□ 2.68
CUEDC1-202ENST00000407144 UBTFP17480 764 aaKnown RBP31.74■■■□□ 2.67
CUEDC1-202ENST00000407144 KCNH8Q96L42 1107 aa31.66■■■□□ 2.66
CUEDC1-202ENST00000407144 VPS8Q8N3P4 1428 aa31.64■■■□□ 2.66
CUEDC1-202ENST00000407144 DEKP35659 375 aaKnown RBP31.58■■■□□ 2.65
CUEDC1-202ENST00000407144 CLIP1P30622 1438 aa31.55■■■□□ 2.64
CUEDC1-202ENST00000407144 ERICH6BQ5W0A0 696 aa31.52■■■□□ 2.64
CUEDC1-202ENST00000407144 NESP48681 1621 aa31.52■■■□□ 2.64
CUEDC1-202ENST00000407144 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
CUEDC1-202ENST00000407144 ITGAEP38570 1179 aa31.5■■■□□ 2.63
CUEDC1-202ENST00000407144 KIF21BO75037 1637 aa31.49■■■□□ 2.63
CUEDC1-202ENST00000407144 CEP164Q9UPV0 1460 aa31.48■■■□□ 2.63
CUEDC1-202ENST00000407144 CDK11AQ9UQ88 783 aaPredicted RBP31.46■■■□□ 2.63
CUEDC1-202ENST00000407144 CCER2I3L3R5 266 aa31.42■■■□□ 2.62
CUEDC1-202ENST00000407144 CUX2O14529 1486 aa31.42■■■□□ 2.62
CUEDC1-202ENST00000407144 ANO8Q9HCE9 1232 aaPredicted RBP31.39■■■□□ 2.61
CUEDC1-202ENST00000407144 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
CUEDC1-202ENST00000407144 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
CUEDC1-202ENST00000407144 PPP1R15AO75807 674 aaPredicted RBP31.23■■■□□ 2.59
CUEDC1-202ENST00000407144 RRBP1Q9P2E9 1410 aaKnown RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms