RNA–Protein interactions for RNA: ENST00000372469.5

PRRX2-201, Transcript of paired related homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRX2, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX2-201ENST00000372469 NISCHQ9Y2I1 1504 aa60.24■■■■■ 7.23
PRRX2-201ENST00000372469 CCDC180Q9P1Z9 1646 aa53.89■■■■■ 6.22
PRRX2-201ENST00000372469 ABCC9O60706 1549 aa53.89■■■■■ 6.22
PRRX2-201ENST00000372469 RB1CC1Q8TDY2 1594 aa51.23■■■■■ 5.79
PRRX2-201ENST00000372469 NACADO15069 1562 aa50.92■■■■■ 5.74
PRRX2-201ENST00000372469 DCAF8L2P0C7V8 631 aa50.88■■■■■ 5.74
PRRX2-201ENST00000372469 DNAJC5BQ9UF47 199 aa50.56■■■■■ 5.68
PRRX2-201ENST00000372469 PABPN1Q86U42 306 aaKnown RBP eCLIP50.27■■■■■ 5.64
PRRX2-201ENST00000372469 UNC13AQ9UPW8 1703 aa50.24■■■■■ 5.63
PRRX2-201ENST00000372469 MYO15BQ96JP2 1530 aa50.22■■■■■ 5.63
PRRX2-201ENST00000372469 ZCCHC6Q5VYS8 1495 aaKnown RBP49.93■■■■■ 5.58
PRRX2-201ENST00000372469 BICRAQ9NZM4 1560 aa49.88■■■■■ 5.58
PRRX2-201ENST00000372469 DCAF1Q9Y4B6 1507 aa49.67■■■■■ 5.54
PRRX2-201ENST00000372469 SCRIBQ14160 1630 aa49.24■■■■■ 5.47
PRRX2-201ENST00000372469 SHROOM4Q9ULL8 1493 aa48.94■■■■■ 5.43
PRRX2-201ENST00000372469 CC2D2AQ9P2K1 1620 aa48.66■■■■■ 5.38
PRRX2-201ENST00000372469 EIF4G1Q04637 1599 aaKnown RBP48.56■■■■■ 5.36
PRRX2-201ENST00000372469 CECR2Q9BXF3 1484 aa48.47■■■■■ 5.35
PRRX2-201ENST00000372469 NCAPD3P42695 1498 aa47.05■■■■■ 5.12
PRRX2-201ENST00000372469 ATAD2BQ9ULI0 1458 aa46.97■■■■■ 5.11
PRRX2-201ENST00000372469 SMARCA4P51532 1647 aa46.95■■■■■ 5.11
PRRX2-201ENST00000372469 SMARCA2P51531 1590 aa46.75■■■■■ 5.07
PRRX2-201ENST00000372469 BAZ1AQ9NRL2 1556 aaPredicted RBP46.68■■■■■ 5.06
PRRX2-201ENST00000372469 HMGXB3Q12766 1538 aa46.66■■■■■ 5.06
PRRX2-201ENST00000372469 MROH2BQ7Z745 1585 aa46.49■■■■■ 5.03
PRRX2-201ENST00000372469 BAZ1BQ9UIG0 1483 aaKnown RBP46.47■■■■■ 5.03
PRRX2-201ENST00000372469 PEG3Q9GZU2 1588 aa46.44■■■■■ 5.03
PRRX2-201ENST00000372469 ERCC6Q03468 1493 aa46.41■■■■■ 5.02
PRRX2-201ENST00000372469 NESP48681 1621 aa46.39■■■■■ 5.02
PRRX2-201ENST00000372469 CUX2O14529 1486 aa46.22■■■■■ 4.99
PRRX2-201ENST00000372469 DNAJC5Q9H3Z4 198 aa46.17■■■■■ 4.98
PRRX2-201ENST00000372469 WIZO95785 1651 aa45.96■■■■■ 4.95
PRRX2-201ENST00000372469 LAMC3Q9Y6N6 1575 aa45.92■■■■■ 4.94
PRRX2-201ENST00000372469 THOC2Q8NI27 1593 aaKnown RBP45.79■■■■■ 4.92
PRRX2-201ENST00000372469 KIF21AQ7Z4S6 1674 aa45.75■■■■■ 4.91
PRRX2-201ENST00000372469 PDS5BQ9NTI5 1447 aa45.65■■■■■ 4.9
PRRX2-201ENST00000372469 CADPSQ9ULU8 1353 aa45.64■■■■■ 4.9
PRRX2-201ENST00000372469 RSF1Q96T23 1441 aaPredicted RBP45.56■■■■■ 4.88
PRRX2-201ENST00000372469 MRC2Q9UBG0 1479 aa45.27■■■■■ 4.84
PRRX2-201ENST00000372469 TOP2AP11388 1531 aaKnown RBP45.27■■■■■ 4.84
PRRX2-201ENST00000372469 WDR62O43379 1518 aa45.16■■■■■ 4.82
PRRX2-201ENST00000372469 CFTRP13569 1480 aa45.15■■■■■ 4.82
PRRX2-201ENST00000372469 FANCD2Q9BXW9 1451 aa45.12■■■■■ 4.81
PRRX2-201ENST00000372469 CEP164Q9UPV0 1460 aa45.12■■■■■ 4.81
PRRX2-201ENST00000372469 CCDC88BA6NC98 1476 aa44.85■■■■■ 4.77
PRRX2-201ENST00000372469 URB2Q14146 1524 aaKnown RBP44.8■■■■■ 4.76
PRRX2-201ENST00000372469 PRDM2Q13029 1718 aa44.69■■■■■ 4.75
PRRX2-201ENST00000372469 TOPBP1Q92547 1522 aa44.31■■■■■ 4.68
PRRX2-201ENST00000372469 ZNF608Q9ULD9 1512 aaPredicted RBP44.26■■■■■ 4.68
PRRX2-201ENST00000372469 TRIM41Q8WV44 630 aa44.24■■■■■ 4.67
PRRX2-201ENST00000372469 OSCARQ8IYS5 282 aa44.23■■■■■ 4.67
PRRX2-201ENST00000372469 IFT140Q96RY7 1462 aa44.19■■■■■ 4.67
PRRX2-201ENST00000372469 DNMBPQ6XZF7 1577 aa44.12■■■■■ 4.65
PRRX2-201ENST00000372469 ABCC8Q09428 1581 aa44.11■■■■■ 4.65
PRRX2-201ENST00000372469 EIF4G3O43432 1585 aaKnown RBP43.93■■■■■ 4.62
PRRX2-201ENST00000372469 TARBP1Q13395 1621 aaKnown RBP43.93■■■■■ 4.62
PRRX2-201ENST00000372469 AQRO60306 1485 aaKnown RBP eCLIP43.87■■■■■ 4.61
PRRX2-201ENST00000372469 POLA1P09884 1462 aaPredicted RBP43.87■■■■■ 4.61
PRRX2-201ENST00000372469 RAD54L2Q9Y4B4 1467 aa43.79■■■■■ 4.6
PRRX2-201ENST00000372469 SUPT5HO00267 1087 aaKnown RBP43.74■■■■■ 4.59
PRRX2-201ENST00000372469 SOGA1O94964 1423 aa43.68■■■■■ 4.58
PRRX2-201ENST00000372469 RIMBP3CA6NJZ7 1639 aa43.67■■■■■ 4.58
PRRX2-201ENST00000372469 RIMBP3BA6NNM3 1639 aa43.67■■■■■ 4.58
PRRX2-201ENST00000372469 RIMBP3Q9UFD9 1639 aa43.67■■■■■ 4.58
PRRX2-201ENST00000372469 CUX1P39880 1505 aa43.65■■■■■ 4.58
PRRX2-201ENST00000372469 CHD1O14646 1710 aa43.63■■■■■ 4.57
PRRX2-201ENST00000372469 FGD5Q6ZNL6 1462 aa43.63■■■■■ 4.57
PRRX2-201ENST00000372469 TDRD9Q8NDG6 1382 aaKnown RBP43.62■■■■■ 4.57
PRRX2-201ENST00000372469 FBLN2P98095 1184 aa43.52■■■■■ 4.56
PRRX2-201ENST00000372469 ARHGEF11O15085 1522 aa43.52■■■■■ 4.56
PRRX2-201ENST00000372469 SNAPC4Q5SXM2 1469 aa43.36■■■■■ 4.53
PRRX2-201ENST00000372469 WDR97A6NE52 1622 aa43.31■■■■■ 4.52
PRRX2-201ENST00000372469 CYB5RLQ6IPT4 315 aa43.26■■■■■ 4.52
PRRX2-201ENST00000372469 GRIN2BQ13224 1484 aa43.22■■■■■ 4.51
PRRX2-201ENST00000372469 CHMP7Q8WUX9 453 aaPredicted RBP43.18■■■■■ 4.5
PRRX2-201ENST00000372469 MAGI1Q96QZ7 1491 aaPredicted RBP43.17■■■■■ 4.5
PRRX2-201ENST00000372469 GAPVD1Q14C86 1478 aa43.13■■■■■ 4.49
PRRX2-201ENST00000372469 ARAP1Q96P48 1450 aa43.13■■■■■ 4.49
PRRX2-201ENST00000372469 PBRM1Q86U86 1689 aa43.12■■■■■ 4.49
PRRX2-201ENST00000372469 ABCA10Q8WWZ4 1543 aa43.1■■■■■ 4.49
PRRX2-201ENST00000372469 CLASP1Q7Z460 1538 aa43.08■■■■■ 4.49
PRRX2-201ENST00000372469 SYNJ2O15056 1496 aa43.06■■■■■ 4.48
PRRX2-201ENST00000372469 ABCA5Q8WWZ7 1642 aa43.04■■■■■ 4.48
PRRX2-201ENST00000372469 SYNJ1O43426 1573 aa43■■■■■ 4.47
PRRX2-201ENST00000372469 BIVM-ERCC5R4GMW8 1640 aa42.94■■■■■ 4.46
PRRX2-201ENST00000372469 WRNQ14191 1432 aaPredicted RBP eCLIP42.94■■■■■ 4.46
PRRX2-201ENST00000372469 TOP2BQ02880 1626 aa42.93■■■■■ 4.46
PRRX2-201ENST00000372469 ADAMTS12P58397 1594 aa42.69■■■■■ 4.42
PRRX2-201ENST00000372469 GRIN2AQ12879 1464 aa42.69■■■■■ 4.42
PRRX2-201ENST00000372469 TRHP20396 242 aaPredicted RBP42.69■■■■■ 4.42
PRRX2-201ENST00000372469 CEP170Q5SW79 1584 aa42.59■■■■■ 4.41
PRRX2-201ENST00000372469 ERCC6L2Q5T890 1561 aa42.56■■■■■ 4.4
PRRX2-201ENST00000372469 FHAD1B1AJZ9 1412 aa42.55■■■■■ 4.4
PRRX2-201ENST00000372469 NUP160Q12769 1436 aa42.54■■■■■ 4.4
PRRX2-201ENST00000372469 ERICH3Q5RHP9 1530 aa42.53■■■■■ 4.4
PRRX2-201ENST00000372469 SHROOM2Q13796 1616 aa42.34■■■■■ 4.37
PRRX2-201ENST00000372469 JPH4Q96JJ6 628 aa42.17■■■■■ 4.34
PRRX2-201ENST00000372469 PRG4Q92954 1404 aaPredicted RBP42.15■■■■■ 4.34
PRRX2-201ENST00000372469 IGF1RP08069 1367 aa42.14■■■■■ 4.34
PRRX2-201ENST00000372469 RUSC2Q8N2Y8 1516 aa42.08■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms