RNA–Protein interactions for RNA: ENST00000238721.8

TP53I3-201, Transcript of tumor protein p53 inducible protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TP53I3, Length 1,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53I3-201ENST00000238721 NISCHQ9Y2I1 1504 aa54.59■■■■■ 6.33
TP53I3-201ENST00000238721 CCDC180Q9P1Z9 1646 aa47.38■■■■■ 5.18
TP53I3-201ENST00000238721 ZCCHC6Q5VYS8 1495 aaKnown RBP45.89■■■■■ 4.94
TP53I3-201ENST00000238721 DCAF8L2P0C7V8 631 aa45.27■■■■■ 4.84
TP53I3-201ENST00000238721 DCAF1Q9Y4B6 1507 aa45.05■■■■■ 4.8
TP53I3-201ENST00000238721 SHROOM4Q9ULL8 1493 aa44.91■■■■■ 4.78
TP53I3-201ENST00000238721 ABCC9O60706 1549 aa44.81■■■■■ 4.76
TP53I3-201ENST00000238721 MYO15BQ96JP2 1530 aa44.41■■■■■ 4.7
TP53I3-201ENST00000238721 NACADO15069 1562 aa44.14■■■■■ 4.66
TP53I3-201ENST00000238721 SCRIBQ14160 1630 aa43.77■■■■■ 4.6
TP53I3-201ENST00000238721 RB1CC1Q8TDY2 1594 aa43.73■■■■■ 4.59
TP53I3-201ENST00000238721 SUPT5HO00267 1087 aaKnown RBP43.34■■■■■ 4.53
TP53I3-201ENST00000238721 UNC13AQ9UPW8 1703 aa42.8■■■■■ 4.44
TP53I3-201ENST00000238721 RSF1Q96T23 1441 aaPredicted RBP42.49■■■■■ 4.39
TP53I3-201ENST00000238721 CECR2Q9BXF3 1484 aa42.47■■■■■ 4.39
TP53I3-201ENST00000238721 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
TP53I3-201ENST00000238721 PABPN1Q86U42 306 aaKnown RBP eCLIP42.39■■■■■ 4.38
TP53I3-201ENST00000238721 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
TP53I3-201ENST00000238721 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
TP53I3-201ENST00000238721 SMARCA4P51532 1647 aa41.9■■■■■ 4.3
TP53I3-201ENST00000238721 WIZO95785 1651 aa41.88■■■■■ 4.29
TP53I3-201ENST00000238721 CHIC1Q5VXU3 224 aa41.53■■■■■ 4.24
TP53I3-201ENST00000238721 TOP2AP11388 1531 aaKnown RBP41.42■■■■■ 4.22
TP53I3-201ENST00000238721 PEG3Q9GZU2 1588 aa41.32■■■■■ 4.2
TP53I3-201ENST00000238721 ATAD2BQ9ULI0 1458 aa41.19■■■■■ 4.19
TP53I3-201ENST00000238721 SMARCA2P51531 1590 aa41.14■■■■■ 4.18
TP53I3-201ENST00000238721 EIF4G1Q04637 1599 aaKnown RBP41.12■■■■■ 4.17
TP53I3-201ENST00000238721 CCDC88BA6NC98 1476 aa41.06■■■■■ 4.16
TP53I3-201ENST00000238721 BAZ1BQ9UIG0 1483 aaKnown RBP41■■■■■ 4.15
TP53I3-201ENST00000238721 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
TP53I3-201ENST00000238721 HMGXB3Q12766 1538 aa40.69■■■■■ 4.1
TP53I3-201ENST00000238721 TRIM41Q8WV44 630 aa40.69■■■■■ 4.1
TP53I3-201ENST00000238721 CC2D2AQ9P2K1 1620 aa40.48■■■■■ 4.07
TP53I3-201ENST00000238721 ABCC8Q09428 1581 aa40.29■■■■■ 4.04
TP53I3-201ENST00000238721 FAM9AQ8IZU1 332 aaPredicted RBP40.03■■■■■ 4
TP53I3-201ENST00000238721 LOC105371045A0A1W2PR82 267 aa40.03■■■■■ 4
TP53I3-201ENST00000238721 WRNQ14191 1432 aaPredicted RBP eCLIP40■■■■□ 3.99
TP53I3-201ENST00000238721 CFTRP13569 1480 aa39.94■■■■□ 3.98
TP53I3-201ENST00000238721 CADPSQ9ULU8 1353 aa39.8■■■■□ 3.96
TP53I3-201ENST00000238721 SYNJ1O43426 1573 aa39.79■■■■□ 3.96
TP53I3-201ENST00000238721 PRDM2Q13029 1718 aa39.63■■■■□ 3.94
TP53I3-201ENST00000238721 SOGA1O94964 1423 aa39.61■■■■□ 3.93
TP53I3-201ENST00000238721 TOP2BQ02880 1626 aa39.57■■■■□ 3.93
TP53I3-201ENST00000238721 EHMT2Q96KQ7 1210 aa39.53■■■■□ 3.92
TP53I3-201ENST00000238721 DNAJC5BQ9UF47 199 aa39.51■■■■□ 3.92
TP53I3-201ENST00000238721 EEA1Q15075 1411 aa39.5■■■■□ 3.91
TP53I3-201ENST00000238721 BIVM-ERCC5R4GMW8 1640 aa39.49■■■■□ 3.91
TP53I3-201ENST00000238721 CUX1P39880 1505 aa39.46■■■■□ 3.91
TP53I3-201ENST00000238721 RUSC2Q8N2Y8 1516 aa39.44■■■■□ 3.9
TP53I3-201ENST00000238721 NESP48681 1621 aa39.4■■■■□ 3.9
TP53I3-201ENST00000238721 FANCD2Q9BXW9 1451 aa39.36■■■■□ 3.89
TP53I3-201ENST00000238721 CSRNP3Q8WYN3 585 aa39.36■■■■□ 3.89
TP53I3-201ENST00000238721 LAMC3Q9Y6N6 1575 aa39.32■■■■□ 3.88
TP53I3-201ENST00000238721 PDS5BQ9NTI5 1447 aa39.08■■■■□ 3.85
TP53I3-201ENST00000238721 CEP164Q9UPV0 1460 aa39.07■■■■□ 3.85
TP53I3-201ENST00000238721 GOLGA3Q08378 1498 aa39.01■■■■□ 3.84
TP53I3-201ENST00000238721 FGD5Q6ZNL6 1462 aa39.01■■■■□ 3.83
TP53I3-201ENST00000238721 DNMBPQ6XZF7 1577 aa39■■■■□ 3.83
TP53I3-201ENST00000238721 KIF27Q86VH2 1401 aa38.97■■■■□ 3.83
TP53I3-201ENST00000238721 UBTFP17480 764 aaKnown RBP38.96■■■■□ 3.83
TP53I3-201ENST00000238721 KIF21BO75037 1637 aa38.95■■■■□ 3.83
TP53I3-201ENST00000238721 TOPBP1Q92547 1522 aa38.94■■■■□ 3.82
TP53I3-201ENST00000238721 TNIKQ9UKE5 1360 aa38.93■■■■□ 3.82
TP53I3-201ENST00000238721 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
TP53I3-201ENST00000238721 CUX2O14529 1486 aa38.84■■■■□ 3.81
TP53I3-201ENST00000238721 KIF21AQ7Z4S6 1674 aa38.84■■■■□ 3.81
TP53I3-201ENST00000238721 POLA1P09884 1462 aaPredicted RBP38.78■■■■□ 3.8
TP53I3-201ENST00000238721 RAPGEF2Q9Y4G8 1499 aa38.78■■■■□ 3.8
TP53I3-201ENST00000238721 CEP162Q5TB80 1403 aa38.78■■■■□ 3.8
TP53I3-201ENST00000238721 PRXQ9BXM0 1461 aa38.73■■■■□ 3.79
TP53I3-201ENST00000238721 RAD54L2Q9Y4B4 1467 aa38.71■■■■□ 3.79
TP53I3-201ENST00000238721 ERICH3Q5RHP9 1530 aa38.65■■■■□ 3.78
TP53I3-201ENST00000238721 ABCA10Q8WWZ4 1543 aa38.63■■■■□ 3.77
TP53I3-201ENST00000238721 IGF1RP08069 1367 aa38.61■■■■□ 3.77
TP53I3-201ENST00000238721 MRC2Q9UBG0 1479 aa38.55■■■■□ 3.76
TP53I3-201ENST00000238721 PCGF6Q9BYE7 350 aa38.45■■■■□ 3.75
TP53I3-201ENST00000238721 CARMIL1Q5VZK9 1371 aa38.43■■■■□ 3.74
TP53I3-201ENST00000238721 CLIP1P30622 1438 aa38.43■■■■□ 3.74
TP53I3-201ENST00000238721 ERCC6Q03468 1493 aa38.4■■■■□ 3.74
TP53I3-201ENST00000238721 WDR97A6NE52 1622 aa38.4■■■■□ 3.74
TP53I3-201ENST00000238721 RANGAP1P46060 587 aaPredicted RBP38.34■■■■□ 3.73
TP53I3-201ENST00000238721 TDRD9Q8NDG6 1382 aaKnown RBP38.34■■■■□ 3.73
TP53I3-201ENST00000238721 TRIM26Q12899 539 aaPredicted RBP38.33■■■■□ 3.73
TP53I3-201ENST00000238721 WDR62O43379 1518 aa38.29■■■■□ 3.72
TP53I3-201ENST00000238721 TARBP1Q13395 1621 aaKnown RBP38.29■■■■□ 3.72
TP53I3-201ENST00000238721 ABCA5Q8WWZ7 1642 aa38.26■■■■□ 3.72
TP53I3-201ENST00000238721 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
TP53I3-201ENST00000238721 PPARGC1BQ86YN6 1023 aaKnown RBP38.2■■■■□ 3.71
TP53I3-201ENST00000238721 CUL7Q14999 1698 aa38.19■■■■□ 3.7
TP53I3-201ENST00000238721 IFT140Q96RY7 1462 aa38.11■■■■□ 3.69
TP53I3-201ENST00000238721 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
TP53I3-201ENST00000238721 VPS8Q8N3P4 1428 aa38.09■■■■□ 3.69
TP53I3-201ENST00000238721 AQRO60306 1485 aaKnown RBP eCLIP38.04■■■■□ 3.682e-7■■■■□ 21.8
TP53I3-201ENST00000238721 ARAP1Q96P48 1450 aa37.99■■■■□ 3.67
TP53I3-201ENST00000238721 ZNF608Q9ULD9 1512 aaPredicted RBP37.94■■■■□ 3.66
TP53I3-201ENST00000238721 ARHGAP35Q9NRY4 1499 aa37.94■■■■□ 3.66
TP53I3-201ENST00000238721 PBRM1Q86U86 1689 aa37.93■■■■□ 3.66
TP53I3-201ENST00000238721 GRIN2BQ13224 1484 aa37.9■■■■□ 3.66
TP53I3-201ENST00000238721 TTBK1Q5TCY1 1321 aaPredicted RBP37.88■■■■□ 3.65
TP53I3-201ENST00000238721 APLP2Q06481 763 aa37.84■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms