Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.7■□□□□ 0.26
PHGDHO43175 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.7■□□□□ 0.26
PHGDHO43175 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.7■□□□□ 0.26
PHGDHO43175 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.7■□□□□ 0.26
PHGDHO43175 MTDHP4-201ENST00000600287 670 ntBASIC16.7■□□□□ 0.26
PHGDHO43175 AC008608.2-201ENST00000606089 416 ntBASIC16.7■□□□□ 0.26
PHGDHO43175 AL121772.3-201ENST00000610840 674 ntBASIC16.7■□□□□ 0.26
PHGDHO43175 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PHGDHO43175 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHGDHO43175 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SNX33P1-201ENST00000592116 1762 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 TOP3BP1-201ENST00000420768 1380 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 PAWRP1-201ENST00000451083 565 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.69■□□□□ 0.26
PHGDHO43175 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.69■□□□□ 0.26
PHGDHO43175 AC139887.3-201ENST00000568585 713 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.69■□□□□ 0.26
PHGDHO43175 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.69■□□□□ 0.26
PHGDHO43175 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PHGDHO43175 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
PHGDHO43175 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHGDHO43175 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PHGDHO43175 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.68■□□□□ 0.26
PHGDHO43175 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHGDHO43175 PTCHD3P3-201ENST00000403073 906 ntBASIC16.68■□□□□ 0.26
PHGDHO43175 TSPY19P-201ENST00000418461 509 ntBASIC16.68■□□□□ 0.26
PHGDHO43175 TSPY18P-201ENST00000441642 509 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms