RNA–Protein interactions for RNA: ENST00000614775.4

SMIM20-205, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 1,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-205ENST00000614775 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
SMIM20-205ENST00000614775 ABCC9O60706 1549 aa43.35■■■■■ 4.53
SMIM20-205ENST00000614775 CCDC180Q9P1Z9 1646 aa42.37■■■■■ 4.37
SMIM20-205ENST00000614775 DNAJC5BQ9UF47 199 aa41.61■■■■■ 4.25
SMIM20-205ENST00000614775 RB1CC1Q8TDY2 1594 aa40.82■■■■■ 4.12
SMIM20-205ENST00000614775 NACADO15069 1562 aa40.29■■■■■ 4.04
SMIM20-205ENST00000614775 PABPN1Q86U42 306 aaKnown RBP eCLIP40.19■■■■■ 4.02
SMIM20-205ENST00000614775 UNC13AQ9UPW8 1703 aa39.92■■■■□ 3.98
SMIM20-205ENST00000614775 DCAF8L2P0C7V8 631 aa39.8■■■■□ 3.96
SMIM20-205ENST00000614775 BICRAQ9NZM4 1560 aa39.71■■■■□ 3.95
SMIM20-205ENST00000614775 MYO15BQ96JP2 1530 aa39.41■■■■□ 3.9
SMIM20-205ENST00000614775 CECR2Q9BXF3 1484 aa39.17■■■■□ 3.86
SMIM20-205ENST00000614775 CC2D2AQ9P2K1 1620 aa39.13■■■■□ 3.85
SMIM20-205ENST00000614775 SHROOM4Q9ULL8 1493 aa39.04■■■■□ 3.84
SMIM20-205ENST00000614775 DNAJC5Q9H3Z4 198 aa38.94■■■■□ 3.82
SMIM20-205ENST00000614775 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
SMIM20-205ENST00000614775 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
SMIM20-205ENST00000614775 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
SMIM20-205ENST00000614775 ZCCHC6Q5VYS8 1495 aaKnown RBP38.5■■■■□ 3.75
SMIM20-205ENST00000614775 CUX2O14529 1486 aa37.8■■■■□ 3.64
SMIM20-205ENST00000614775 ERCC6Q03468 1493 aa37.49■■■■□ 3.59
SMIM20-205ENST00000614775 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
SMIM20-205ENST00000614775 NESP48681 1621 aa36.97■■■■□ 3.51
SMIM20-205ENST00000614775 ATAD2BQ9ULI0 1458 aa36.95■■■■□ 3.51
SMIM20-205ENST00000614775 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
SMIM20-205ENST00000614775 THOC2Q8NI27 1593 aaKnown RBP36.82■■■■□ 3.48
SMIM20-205ENST00000614775 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
SMIM20-205ENST00000614775 TRIM41Q8WV44 630 aa36.77■■■■□ 3.48
SMIM20-205ENST00000614775 SMARCA4P51532 1647 aa36.66■■■■□ 3.46
SMIM20-205ENST00000614775 LAMC3Q9Y6N6 1575 aa36.53■■■■□ 3.44
SMIM20-205ENST00000614775 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
SMIM20-205ENST00000614775 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.43
SMIM20-205ENST00000614775 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
SMIM20-205ENST00000614775 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
SMIM20-205ENST00000614775 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
SMIM20-205ENST00000614775 MRC2Q9UBG0 1479 aa36.11■■■■□ 3.37
SMIM20-205ENST00000614775 WDR62O43379 1518 aa36.07■■■■□ 3.36
SMIM20-205ENST00000614775 CADPSQ9ULU8 1353 aa36.02■■■■□ 3.36
SMIM20-205ENST00000614775 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
SMIM20-205ENST00000614775 OSCARQ8IYS5 282 aa35.87■■■■□ 3.33
SMIM20-205ENST00000614775 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
SMIM20-205ENST00000614775 FANCD2Q9BXW9 1451 aa35.62■■■■□ 3.29
SMIM20-205ENST00000614775 RIMBP3CA6NJZ7 1639 aa35.56■■■■□ 3.28
SMIM20-205ENST00000614775 RIMBP3BA6NNM3 1639 aa35.56■■■■□ 3.28
SMIM20-205ENST00000614775 RIMBP3Q9UFD9 1639 aa35.56■■■■□ 3.28
SMIM20-205ENST00000614775 WIZO95785 1651 aa35.5■■■■□ 3.27
SMIM20-205ENST00000614775 CFTRP13569 1480 aa35.41■■■■□ 3.26
SMIM20-205ENST00000614775 URB2Q14146 1524 aaKnown RBP35.41■■■■□ 3.26
SMIM20-205ENST00000614775 ARHGEF11O15085 1522 aa35.33■■■■□ 3.25
SMIM20-205ENST00000614775 ZNF608Q9ULD9 1512 aaPredicted RBP35.14■■■■□ 3.22
SMIM20-205ENST00000614775 CYB5RLQ6IPT4 315 aa35.1■■■■□ 3.21
SMIM20-205ENST00000614775 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
SMIM20-205ENST00000614775 TRHP20396 242 aaPredicted RBP35.02■■■■□ 3.2
SMIM20-205ENST00000614775 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
SMIM20-205ENST00000614775 PRDM2Q13029 1718 aa34.97■■■■□ 3.19
SMIM20-205ENST00000614775 ARAP1Q96P48 1450 aa34.92■■■■□ 3.18
SMIM20-205ENST00000614775 EIF4G3O43432 1585 aaKnown RBP34.89■■■■□ 3.18
SMIM20-205ENST00000614775 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
SMIM20-205ENST00000614775 TOPBP1Q92547 1522 aa34.84■■■■□ 3.17
SMIM20-205ENST00000614775 CHD1O14646 1710 aa34.83■■■■□ 3.17
SMIM20-205ENST00000614775 AEBP2Q6ZN18 517 aaPredicted RBP34.75■■■■□ 3.15
SMIM20-205ENST00000614775 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.14
SMIM20-205ENST00000614775 ABCC8Q09428 1581 aa34.67■■■■□ 3.14
SMIM20-205ENST00000614775 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
SMIM20-205ENST00000614775 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
SMIM20-205ENST00000614775 FBLN2P98095 1184 aa34.61■■■■□ 3.13
SMIM20-205ENST00000614775 CCDC88BA6NC98 1476 aa34.58■■■■□ 3.13
SMIM20-205ENST00000614775 CLASP1Q7Z460 1538 aa34.42■■■■□ 3.1
SMIM20-205ENST00000614775 POLA1P09884 1462 aaPredicted RBP34.42■■■■□ 3.1
SMIM20-205ENST00000614775 RAD54L2Q9Y4B4 1467 aa34.31■■■■□ 3.08
SMIM20-205ENST00000614775 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
SMIM20-205ENST00000614775 TDRD9Q8NDG6 1382 aaKnown RBP34.29■■■■□ 3.08
SMIM20-205ENST00000614775 SYNJ1O43426 1573 aa34.28■■■■□ 3.08
SMIM20-205ENST00000614775 SOGA1O94964 1423 aa34.21■■■■□ 3.07
SMIM20-205ENST00000614775 CHMP7Q8WUX9 453 aaPredicted RBP34.19■■■■□ 3.06
SMIM20-205ENST00000614775 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
SMIM20-205ENST00000614775 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
SMIM20-205ENST00000614775 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
SMIM20-205ENST00000614775 SYNJ2O15056 1496 aa34.07■■■■□ 3.04
SMIM20-205ENST00000614775 GRIN2BQ13224 1484 aa34.05■■■■□ 3.04
SMIM20-205ENST00000614775 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
SMIM20-205ENST00000614775 CUX1P39880 1505 aa33.88■■■■□ 3.01
SMIM20-205ENST00000614775 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
SMIM20-205ENST00000614775 ERCC6L2Q5T890 1561 aa33.81■■■■□ 3
SMIM20-205ENST00000614775 ABCA5Q8WWZ7 1642 aa33.67■■■□□ 2.98
SMIM20-205ENST00000614775 KIF13AQ9H1H9 1805 aa33.67■■■□□ 2.98
SMIM20-205ENST00000614775 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
SMIM20-205ENST00000614775 GRIN2AQ12879 1464 aa33.63■■■□□ 2.97
SMIM20-205ENST00000614775 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
SMIM20-205ENST00000614775 NUP160Q12769 1436 aa33.56■■■□□ 2.96
SMIM20-205ENST00000614775 SHROOM2Q13796 1616 aa33.54■■■□□ 2.96
SMIM20-205ENST00000614775 ADAMTS12P58397 1594 aa33.48■■■□□ 2.95
SMIM20-205ENST00000614775 ILDR1Q86SU0 546 aaPredicted RBP33.4■■■□□ 2.94
SMIM20-205ENST00000614775 KDM4FA0A1W2PPD8 638 aa33.36■■■□□ 2.93
SMIM20-205ENST00000614775 ABCC10Q5T3U5 1492 aa33.34■■■□□ 2.93
SMIM20-205ENST00000614775 FAM69CQ0P6D2 419 aa33.33■■■□□ 2.93
SMIM20-205ENST00000614775 FHAD1B1AJZ9 1412 aa33.32■■■□□ 2.92
SMIM20-205ENST00000614775 PRG4Q92954 1404 aaPredicted RBP33.29■■■□□ 2.92
SMIM20-205ENST00000614775 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
SMIM20-205ENST00000614775 MAPKBP1O60336 1514 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms