RNA–Protein interactions for RNA: ENST00000550161.5

TMEM106C-214, Transcript of transmembrane protein 106C, humanhuman

TSL 3 BASIC

Gene TMEM106C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-214ENST00000550161 NISCHQ9Y2I1 1504 aa41.77■■■■■ 4.28
TMEM106C-214ENST00000550161 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
TMEM106C-214ENST00000550161 ABCC9O60706 1549 aa36.07■■■■□ 3.36
TMEM106C-214ENST00000550161 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
TMEM106C-214ENST00000550161 NACADO15069 1562 aa34.77■■■■□ 3.16
TMEM106C-214ENST00000550161 DCAF8L2P0C7V8 631 aa34.76■■■■□ 3.16
TMEM106C-214ENST00000550161 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
TMEM106C-214ENST00000550161 MYO15BQ96JP2 1530 aa34.63■■■■□ 3.13
TMEM106C-214ENST00000550161 DCAF1Q9Y4B6 1507 aa34.56■■■■□ 3.12
TMEM106C-214ENST00000550161 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
TMEM106C-214ENST00000550161 SCRIBQ14160 1630 aa33.81■■■■□ 3
TMEM106C-214ENST00000550161 BICRAQ9NZM4 1560 aa33.76■■■□□ 2.99
TMEM106C-214ENST00000550161 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
TMEM106C-214ENST00000550161 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
TMEM106C-214ENST00000550161 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
TMEM106C-214ENST00000550161 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
TMEM106C-214ENST00000550161 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
TMEM106C-214ENST00000550161 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
TMEM106C-214ENST00000550161 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
TMEM106C-214ENST00000550161 BAZ1AQ9NRL2 1556 aaPredicted RBP32.33■■■□□ 2.77
TMEM106C-214ENST00000550161 MROH2BQ7Z745 1585 aa32.21■■■□□ 2.75
TMEM106C-214ENST00000550161 ATAD2BQ9ULI0 1458 aa32.15■■■□□ 2.74
TMEM106C-214ENST00000550161 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
TMEM106C-214ENST00000550161 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
TMEM106C-214ENST00000550161 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
TMEM106C-214ENST00000550161 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
TMEM106C-214ENST00000550161 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
TMEM106C-214ENST00000550161 WIZO95785 1651 aa31.86■■■□□ 2.69
TMEM106C-214ENST00000550161 BAZ1BQ9UIG0 1483 aaKnown RBP31.86■■■□□ 2.69
TMEM106C-214ENST00000550161 TOP2AP11388 1531 aaKnown RBP31.53■■■□□ 2.64
TMEM106C-214ENST00000550161 NESP48681 1621 aa31.28■■■□□ 2.6
TMEM106C-214ENST00000550161 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
TMEM106C-214ENST00000550161 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
TMEM106C-214ENST00000550161 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
TMEM106C-214ENST00000550161 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
TMEM106C-214ENST00000550161 ERCC6Q03468 1493 aa31.03■■■□□ 2.56
TMEM106C-214ENST00000550161 CFTRP13569 1480 aa31.02■■■□□ 2.56
TMEM106C-214ENST00000550161 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
TMEM106C-214ENST00000550161 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
TMEM106C-214ENST00000550161 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
TMEM106C-214ENST00000550161 PRDM2Q13029 1718 aa30.79■■■□□ 2.52
TMEM106C-214ENST00000550161 THOC2Q8NI27 1593 aaKnown RBP30.77■■■□□ 2.52
TMEM106C-214ENST00000550161 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
TMEM106C-214ENST00000550161 CUX2O14529 1486 aa30.66■■■□□ 2.5
TMEM106C-214ENST00000550161 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
TMEM106C-214ENST00000550161 WDR62O43379 1518 aa30.57■■■□□ 2.49
TMEM106C-214ENST00000550161 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.47
TMEM106C-214ENST00000550161 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
TMEM106C-214ENST00000550161 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
TMEM106C-214ENST00000550161 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
TMEM106C-214ENST00000550161 CUX1P39880 1505 aa30.2■■■□□ 2.42
TMEM106C-214ENST00000550161 POLA1P09884 1462 aaPredicted RBP30.1■■■□□ 2.41
TMEM106C-214ENST00000550161 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
TMEM106C-214ENST00000550161 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
TMEM106C-214ENST00000550161 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
TMEM106C-214ENST00000550161 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
TMEM106C-214ENST00000550161 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
TMEM106C-214ENST00000550161 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
TMEM106C-214ENST00000550161 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
TMEM106C-214ENST00000550161 BIVM-ERCC5R4GMW8 1640 aa29.97■■■□□ 2.39
TMEM106C-214ENST00000550161 SOGA1O94964 1423 aa29.96■■■□□ 2.39
TMEM106C-214ENST00000550161 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
TMEM106C-214ENST00000550161 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
TMEM106C-214ENST00000550161 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
TMEM106C-214ENST00000550161 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
TMEM106C-214ENST00000550161 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
TMEM106C-214ENST00000550161 ABCA10Q8WWZ4 1543 aa29.77■■■□□ 2.36
TMEM106C-214ENST00000550161 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
TMEM106C-214ENST00000550161 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
TMEM106C-214ENST00000550161 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
TMEM106C-214ENST00000550161 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
TMEM106C-214ENST00000550161 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
TMEM106C-214ENST00000550161 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
TMEM106C-214ENST00000550161 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
TMEM106C-214ENST00000550161 CHD1O14646 1710 aa29.43■■■□□ 2.3
TMEM106C-214ENST00000550161 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
TMEM106C-214ENST00000550161 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
TMEM106C-214ENST00000550161 OSCARQ8IYS5 282 aa29.4■■■□□ 2.3
TMEM106C-214ENST00000550161 KIF27Q86VH2 1401 aa29.39■■■□□ 2.3
TMEM106C-214ENST00000550161 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
TMEM106C-214ENST00000550161 FBLN2P98095 1184 aa29.36■■■□□ 2.29
TMEM106C-214ENST00000550161 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
TMEM106C-214ENST00000550161 CHMP7Q8WUX9 453 aaPredicted RBP29.32■■■□□ 2.28
TMEM106C-214ENST00000550161 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
TMEM106C-214ENST00000550161 IGF1RP08069 1367 aa29.28■■■□□ 2.28
TMEM106C-214ENST00000550161 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
TMEM106C-214ENST00000550161 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
TMEM106C-214ENST00000550161 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
TMEM106C-214ENST00000550161 CUL7Q14999 1698 aa29.16■■■□□ 2.26
TMEM106C-214ENST00000550161 CLASP1Q7Z460 1538 aa29.14■■■□□ 2.25
TMEM106C-214ENST00000550161 NUP160Q12769 1436 aa29.1■■■□□ 2.25
TMEM106C-214ENST00000550161 CARMIL1Q5VZK9 1371 aa29.09■■■□□ 2.25
TMEM106C-214ENST00000550161 CEP170Q5SW79 1584 aa29.08■■■□□ 2.25
TMEM106C-214ENST00000550161 ARHGEF11O15085 1522 aa28.96■■■□□ 2.23
TMEM106C-214ENST00000550161 RIMBP3CA6NJZ7 1639 aa28.95■■■□□ 2.23
TMEM106C-214ENST00000550161 RIMBP3BA6NNM3 1639 aa28.95■■■□□ 2.23
TMEM106C-214ENST00000550161 RIMBP3Q9UFD9 1639 aa28.95■■■□□ 2.23
TMEM106C-214ENST00000550161 EEA1Q15075 1411 aa28.94■■■□□ 2.22
TMEM106C-214ENST00000550161 RAPGEF2Q9Y4G8 1499 aa28.94■■■□□ 2.22
TMEM106C-214ENST00000550161 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms