RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
RAB40B-206ENST00000571995 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
RAB40B-206ENST00000571995 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
RAB40B-206ENST00000571995 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
RAB40B-206ENST00000571995 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
RAB40B-206ENST00000571995 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
RAB40B-206ENST00000571995 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
RAB40B-206ENST00000571995 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
RAB40B-206ENST00000571995 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
RAB40B-206ENST00000571995 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
RAB40B-206ENST00000571995 TTBK1Q5TCY1 1321 aaPredicted RBP26.34■■□□□ 1.81
RAB40B-206ENST00000571995 ABCC9O60706 1549 aa26.31■■□□□ 1.8
RAB40B-206ENST00000571995 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
RAB40B-206ENST00000571995 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
RAB40B-206ENST00000571995 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
RAB40B-206ENST00000571995 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.75
RAB40B-206ENST00000571995 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
RAB40B-206ENST00000571995 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
RAB40B-206ENST00000571995 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
RAB40B-206ENST00000571995 HRCP23327 699 aa25.66■■□□□ 1.7
RAB40B-206ENST00000571995 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
RAB40B-206ENST00000571995 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
RAB40B-206ENST00000571995 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
RAB40B-206ENST00000571995 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
RAB40B-206ENST00000571995 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
RAB40B-206ENST00000571995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
RAB40B-206ENST00000571995 APLP2Q06481 763 aa25.03■■□□□ 1.6
RAB40B-206ENST00000571995 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
RAB40B-206ENST00000571995 ATP1B4Q9UN42 357 aaPredicted RBP24.94■■□□□ 1.58
RAB40B-206ENST00000571995 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
RAB40B-206ENST00000571995 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
RAB40B-206ENST00000571995 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
RAB40B-206ENST00000571995 ITGAEP38570 1179 aa24.75■■□□□ 1.55
RAB40B-206ENST00000571995 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
RAB40B-206ENST00000571995 NACADO15069 1562 aa24.63■■□□□ 1.53
RAB40B-206ENST00000571995 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
RAB40B-206ENST00000571995 WIZO95785 1651 aa24.58■■□□□ 1.52
RAB40B-206ENST00000571995 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
RAB40B-206ENST00000571995 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
RAB40B-206ENST00000571995 SOGA1O94964 1423 aa24.41■■□□□ 1.5
RAB40B-206ENST00000571995 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
RAB40B-206ENST00000571995 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
RAB40B-206ENST00000571995 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
RAB40B-206ENST00000571995 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
RAB40B-206ENST00000571995 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
RAB40B-206ENST00000571995 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
RAB40B-206ENST00000571995 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
RAB40B-206ENST00000571995 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
RAB40B-206ENST00000571995 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
RAB40B-206ENST00000571995 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
RAB40B-206ENST00000571995 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
RAB40B-206ENST00000571995 CLIP1P30622 1438 aa23.92■■□□□ 1.42
RAB40B-206ENST00000571995 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
RAB40B-206ENST00000571995 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
RAB40B-206ENST00000571995 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
RAB40B-206ENST00000571995 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
RAB40B-206ENST00000571995 CNGB1Q14028 1251 aaPredicted RBP23.86■■□□□ 1.41
RAB40B-206ENST00000571995 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
RAB40B-206ENST00000571995 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
RAB40B-206ENST00000571995 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
RAB40B-206ENST00000571995 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
RAB40B-206ENST00000571995 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
RAB40B-206ENST00000571995 FBLN2P98095 1184 aa23.74■■□□□ 1.39
RAB40B-206ENST00000571995 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
RAB40B-206ENST00000571995 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
RAB40B-206ENST00000571995 RAPGEF2Q9Y4G8 1499 aa23.64■■□□□ 1.38
RAB40B-206ENST00000571995 MIER1Q8N108 512 aa23.62■■□□□ 1.37
RAB40B-206ENST00000571995 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
RAB40B-206ENST00000571995 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
RAB40B-206ENST00000571995 EEA1Q15075 1411 aa23.61■■□□□ 1.37
RAB40B-206ENST00000571995 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
RAB40B-206ENST00000571995 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
RAB40B-206ENST00000571995 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
RAB40B-206ENST00000571995 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
RAB40B-206ENST00000571995 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
RAB40B-206ENST00000571995 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
RAB40B-206ENST00000571995 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
RAB40B-206ENST00000571995 CUX2O14529 1486 aa23.42■■□□□ 1.34
RAB40B-206ENST00000571995 VPS8Q8N3P4 1428 aa23.4■■□□□ 1.34
RAB40B-206ENST00000571995 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
RAB40B-206ENST00000571995 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
RAB40B-206ENST00000571995 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
RAB40B-206ENST00000571995 BCANQ96GW7 911 aa23.32■■□□□ 1.32
RAB40B-206ENST00000571995 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
RAB40B-206ENST00000571995 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
RAB40B-206ENST00000571995 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
RAB40B-206ENST00000571995 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
RAB40B-206ENST00000571995 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
RAB40B-206ENST00000571995 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
RAB40B-206ENST00000571995 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
RAB40B-206ENST00000571995 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
RAB40B-206ENST00000571995 MYT1LQ9UL68 1186 aa23.14■■□□□ 1.29
RAB40B-206ENST00000571995 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
RAB40B-206ENST00000571995 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
RAB40B-206ENST00000571995 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
RAB40B-206ENST00000571995 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
RAB40B-206ENST00000571995 KIF21BO75037 1637 aa23.07■■□□□ 1.28
RAB40B-206ENST00000571995 IGF1RP08069 1367 aa23.07■■□□□ 1.28
RAB40B-206ENST00000571995 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
RAB40B-206ENST00000571995 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
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