RNA–Protein interactions for RNA: ENST00000361971.9

PLXNB3-201, Transcript of plexin B3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLXNB3, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-201ENST00000361971 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
PLXNB3-201ENST00000361971 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
PLXNB3-201ENST00000361971 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
PLXNB3-201ENST00000361971 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
PLXNB3-201ENST00000361971 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
PLXNB3-201ENST00000361971 APLP2Q06481 763 aa26.08■■□□□ 1.77
PLXNB3-201ENST00000361971 FAM9AQ8IZU1 332 aaPredicted RBP25.91■■□□□ 1.74
PLXNB3-201ENST00000361971 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
PLXNB3-201ENST00000361971 RANGAP1P46060 587 aaPredicted RBP25.73■■□□□ 1.71
PLXNB3-201ENST00000361971 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
PLXNB3-201ENST00000361971 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
PLXNB3-201ENST00000361971 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
PLXNB3-201ENST00000361971 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
PLXNB3-201ENST00000361971 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
PLXNB3-201ENST00000361971 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
PLXNB3-201ENST00000361971 MYT1LQ9UL68 1186 aa24.73■■□□□ 1.55
PLXNB3-201ENST00000361971 PPARGC1BQ86YN6 1023 aaKnown RBP24.67■■□□□ 1.54
PLXNB3-201ENST00000361971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
PLXNB3-201ENST00000361971 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
PLXNB3-201ENST00000361971 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
PLXNB3-201ENST00000361971 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
PLXNB3-201ENST00000361971 CENPBP07199 599 aaPredicted RBP24.53■■□□□ 1.52
PLXNB3-201ENST00000361971 ITGAEP38570 1179 aa24.43■■□□□ 1.5
PLXNB3-201ENST00000361971 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
PLXNB3-201ENST00000361971 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
PLXNB3-201ENST00000361971 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
PLXNB3-201ENST00000361971 NEFLP07196 543 aa24.29■■□□□ 1.48
PLXNB3-201ENST00000361971 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
PLXNB3-201ENST00000361971 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
PLXNB3-201ENST00000361971 SLC4A1APQ9BWU0 796 aaKnown RBP24.03■■□□□ 1.44
PLXNB3-201ENST00000361971 ABCC9O60706 1549 aa24.02■■□□□ 1.44
PLXNB3-201ENST00000361971 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
PLXNB3-201ENST00000361971 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
PLXNB3-201ENST00000361971 FBLN2P98095 1184 aa23.77■■□□□ 1.4
PLXNB3-201ENST00000361971 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
PLXNB3-201ENST00000361971 DAXXQ9UER7 740 aaPredicted RBP23.7■■□□□ 1.38
PLXNB3-201ENST00000361971 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PLXNB3-201ENST00000361971 HRCP23327 699 aa23.55■■□□□ 1.36
PLXNB3-201ENST00000361971 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
PLXNB3-201ENST00000361971 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
PLXNB3-201ENST00000361971 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
PLXNB3-201ENST00000361971 BCANQ96GW7 911 aa23.38■■□□□ 1.33
PLXNB3-201ENST00000361971 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
PLXNB3-201ENST00000361971 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
PLXNB3-201ENST00000361971 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
PLXNB3-201ENST00000361971 MYT1Q01538 1121 aa23.24■■□□□ 1.31
PLXNB3-201ENST00000361971 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
PLXNB3-201ENST00000361971 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
PLXNB3-201ENST00000361971 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
PLXNB3-201ENST00000361971 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
PLXNB3-201ENST00000361971 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
PLXNB3-201ENST00000361971 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
PLXNB3-201ENST00000361971 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
PLXNB3-201ENST00000361971 ANP32CO43423 234 aa22.98■■□□□ 1.27
PLXNB3-201ENST00000361971 NEFMP07197 916 aa22.93■■□□□ 1.26
PLXNB3-201ENST00000361971 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
PLXNB3-201ENST00000361971 CHGAP10645 457 aaKnown RBP22.91■■□□□ 1.26
PLXNB3-201ENST00000361971 STAG3Q9UJ98 1225 aa22.9■■□□□ 1.26
PLXNB3-201ENST00000361971 CDK11AQ9UQ88 783 aaPredicted RBP22.89■■□□□ 1.25
PLXNB3-201ENST00000361971 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
PLXNB3-201ENST00000361971 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
PLXNB3-201ENST00000361971 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
PLXNB3-201ENST00000361971 RTL5Q5HYW3 569 aaPredicted RBP22.87■■□□□ 1.25
PLXNB3-201ENST00000361971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.22
PLXNB3-201ENST00000361971 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.21
PLXNB3-201ENST00000361971 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
PLXNB3-201ENST00000361971 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
PLXNB3-201ENST00000361971 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
PLXNB3-201ENST00000361971 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
PLXNB3-201ENST00000361971 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
PLXNB3-201ENST00000361971 PLEKHG5O94827 1062 aa22.43■■□□□ 1.18
PLXNB3-201ENST00000361971 A0A0G2JS52 829 aa22.41■■□□□ 1.18
PLXNB3-201ENST00000361971 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
PLXNB3-201ENST00000361971 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
PLXNB3-201ENST00000361971 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
PLXNB3-201ENST00000361971 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
PLXNB3-201ENST00000361971 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
PLXNB3-201ENST00000361971 ZBTB7CA1YPR0 619 aa22.36■■□□□ 1.17
PLXNB3-201ENST00000361971 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
PLXNB3-201ENST00000361971 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
PLXNB3-201ENST00000361971 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
PLXNB3-201ENST00000361971 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
PLXNB3-201ENST00000361971 DDX10Q13206 875 aaKnown RBP22.26■■□□□ 1.15
PLXNB3-201ENST00000361971 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
PLXNB3-201ENST00000361971 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
PLXNB3-201ENST00000361971 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
PLXNB3-201ENST00000361971 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
PLXNB3-201ENST00000361971 ANP32AP39687 249 aaKnown RBP22.21■■□□□ 1.15
PLXNB3-201ENST00000361971 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
PLXNB3-201ENST00000361971 HSP90AA1P07900 732 aaKnown RBP22.18■■□□□ 1.14
PLXNB3-201ENST00000361971 TMC1Q8TDI8 760 aa22.17■■□□□ 1.14
PLXNB3-201ENST00000361971 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
PLXNB3-201ENST00000361971 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
PLXNB3-201ENST00000361971 PLEKHD1A6NEE1 506 aa22.12■■□□□ 1.13
PLXNB3-201ENST00000361971 FKBP8Q14318 412 aa22.11■■□□□ 1.13
PLXNB3-201ENST00000361971 HAP1P54257 671 aaPredicted RBP22.08■■□□□ 1.13
PLXNB3-201ENST00000361971 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
PLXNB3-201ENST00000361971 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
PLXNB3-201ENST00000361971 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
PLXNB3-201ENST00000361971 RGL3Q3MIN7 710 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms