RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
DCLK2-201ENST00000296550 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
DCLK2-201ENST00000296550 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
DCLK2-201ENST00000296550 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
DCLK2-201ENST00000296550 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
DCLK2-201ENST00000296550 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
DCLK2-201ENST00000296550 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
DCLK2-201ENST00000296550 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
DCLK2-201ENST00000296550 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
DCLK2-201ENST00000296550 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
DCLK2-201ENST00000296550 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
DCLK2-201ENST00000296550 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
DCLK2-201ENST00000296550 HRCP23327 699 aa25.5■■□□□ 1.67
DCLK2-201ENST00000296550 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.66
DCLK2-201ENST00000296550 ABCC9O60706 1549 aa25.37■■□□□ 1.65
DCLK2-201ENST00000296550 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
DCLK2-201ENST00000296550 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
DCLK2-201ENST00000296550 PPARGC1BQ86YN6 1023 aaKnown RBP25.19■■□□□ 1.62
DCLK2-201ENST00000296550 APLP2Q06481 763 aa25.17■■□□□ 1.62
DCLK2-201ENST00000296550 UBTFP17480 764 aaKnown RBP25.12■■□□□ 1.61
DCLK2-201ENST00000296550 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
DCLK2-201ENST00000296550 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
DCLK2-201ENST00000296550 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
DCLK2-201ENST00000296550 SCRIBQ14160 1630 aa24.91■■□□□ 1.58
DCLK2-201ENST00000296550 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
DCLK2-201ENST00000296550 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.57
DCLK2-201ENST00000296550 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
DCLK2-201ENST00000296550 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
DCLK2-201ENST00000296550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
DCLK2-201ENST00000296550 ATP1B4Q9UN42 357 aaPredicted RBP24.5■■□□□ 1.51
DCLK2-201ENST00000296550 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
DCLK2-201ENST00000296550 HNRNPUL2Q1KMD3 747 aaKnown RBP24.4■■□□□ 1.5
DCLK2-201ENST00000296550 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
DCLK2-201ENST00000296550 MYT1Q01538 1121 aa24.27■■□□□ 1.48
DCLK2-201ENST00000296550 NACADO15069 1562 aa24.26■■□□□ 1.47
DCLK2-201ENST00000296550 YTHDC1Q96MU7 727 aaKnown RBP24.22■■□□□ 1.47
DCLK2-201ENST00000296550 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
DCLK2-201ENST00000296550 ITGAEP38570 1179 aa24.13■■□□□ 1.45
DCLK2-201ENST00000296550 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
DCLK2-201ENST00000296550 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
DCLK2-201ENST00000296550 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
DCLK2-201ENST00000296550 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
DCLK2-201ENST00000296550 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.41
DCLK2-201ENST00000296550 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
DCLK2-201ENST00000296550 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
DCLK2-201ENST00000296550 EEA1Q15075 1411 aa23.7■■□□□ 1.38
DCLK2-201ENST00000296550 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
DCLK2-201ENST00000296550 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
DCLK2-201ENST00000296550 WIZO95785 1651 aa23.65■■□□□ 1.38
DCLK2-201ENST00000296550 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
DCLK2-201ENST00000296550 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
DCLK2-201ENST00000296550 SOGA1O94964 1423 aa23.6■■□□□ 1.37
DCLK2-201ENST00000296550 CLIP1P30622 1438 aa23.6■■□□□ 1.37
DCLK2-201ENST00000296550 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
DCLK2-201ENST00000296550 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
DCLK2-201ENST00000296550 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
DCLK2-201ENST00000296550 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
DCLK2-201ENST00000296550 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
DCLK2-201ENST00000296550 BAZ1BQ9UIG0 1483 aaKnown RBP23.53■■□□□ 1.36
DCLK2-201ENST00000296550 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
DCLK2-201ENST00000296550 NEFLP07196 543 aa23.47■■□□□ 1.35
DCLK2-201ENST00000296550 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
DCLK2-201ENST00000296550 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
DCLK2-201ENST00000296550 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
DCLK2-201ENST00000296550 FBLN2P98095 1184 aa23.26■■□□□ 1.31
DCLK2-201ENST00000296550 TRIM52Q96A61 297 aa23.22■■□□□ 1.31
DCLK2-201ENST00000296550 ARID3CA6NKF2 412 aa23.2■■□□□ 1.31
DCLK2-201ENST00000296550 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
DCLK2-201ENST00000296550 MIER1Q8N108 512 aa23.19■■□□□ 1.3
DCLK2-201ENST00000296550 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
DCLK2-201ENST00000296550 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
DCLK2-201ENST00000296550 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
DCLK2-201ENST00000296550 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
DCLK2-201ENST00000296550 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
DCLK2-201ENST00000296550 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
DCLK2-201ENST00000296550 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
DCLK2-201ENST00000296550 ANP32CO43423 234 aa23.05■■□□□ 1.28
DCLK2-201ENST00000296550 ERICH6Q7L0X2 663 aa23.01■■□□□ 1.27
DCLK2-201ENST00000296550 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
DCLK2-201ENST00000296550 BCANQ96GW7 911 aa22.96■■□□□ 1.27
DCLK2-201ENST00000296550 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
DCLK2-201ENST00000296550 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
DCLK2-201ENST00000296550 CUX2O14529 1486 aa22.91■■□□□ 1.26
DCLK2-201ENST00000296550 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
DCLK2-201ENST00000296550 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
DCLK2-201ENST00000296550 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
DCLK2-201ENST00000296550 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
DCLK2-201ENST00000296550 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
DCLK2-201ENST00000296550 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
DCLK2-201ENST00000296550 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
DCLK2-201ENST00000296550 HIRIP3Q9BW71 556 aaPredicted RBP22.82■■□□□ 1.24
DCLK2-201ENST00000296550 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
DCLK2-201ENST00000296550 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
DCLK2-201ENST00000296550 SIN3AQ96ST3 1273 aa22.74■■□□□ 1.23
DCLK2-201ENST00000296550 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.23
DCLK2-201ENST00000296550 RRP7BPQ9NSQ0 103 aa22.69■■□□□ 1.22
DCLK2-201ENST00000296550 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
DCLK2-201ENST00000296550 FKBP8Q14318 412 aa22.65■■□□□ 1.22
DCLK2-201ENST00000296550 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
DCLK2-201ENST00000296550 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms