RNA–Protein interactions for RNA: ENST00000442633.1

TM4SF19-TCTEX1D2-201, Transcript of TM4SF19-TCTEX1D2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF19-TCTEX1D2, Length 964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF19-TCTEX1D2-201ENST00000442633 NISCHQ9Y2I1 1504 aa43.33■■■■■ 4.53
TM4SF19-TCTEX1D2-201ENST00000442633 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
TM4SF19-TCTEX1D2-201ENST00000442633 ABCC9O60706 1549 aa38.17■■■■□ 3.7
TM4SF19-TCTEX1D2-201ENST00000442633 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
TM4SF19-TCTEX1D2-201ENST00000442633 NACADO15069 1562 aa36.39■■■■□ 3.42
TM4SF19-TCTEX1D2-201ENST00000442633 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
TM4SF19-TCTEX1D2-201ENST00000442633 ZCCHC6Q5VYS8 1495 aaKnown RBP36.03■■■■□ 3.36
TM4SF19-TCTEX1D2-201ENST00000442633 MYO15BQ96JP2 1530 aa36.02■■■■□ 3.36
TM4SF19-TCTEX1D2-201ENST00000442633 UNC13AQ9UPW8 1703 aa35.85■■■■□ 3.33
TM4SF19-TCTEX1D2-201ENST00000442633 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
TM4SF19-TCTEX1D2-201ENST00000442633 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.29
TM4SF19-TCTEX1D2-201ENST00000442633 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
TM4SF19-TCTEX1D2-201ENST00000442633 SCRIBQ14160 1630 aa35.32■■■■□ 3.25
TM4SF19-TCTEX1D2-201ENST00000442633 DNAJC5BQ9UF47 199 aa35.32■■■■□ 3.24
TM4SF19-TCTEX1D2-201ENST00000442633 SHROOM4Q9ULL8 1493 aa34.95■■■■□ 3.19
TM4SF19-TCTEX1D2-201ENST00000442633 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
TM4SF19-TCTEX1D2-201ENST00000442633 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
TM4SF19-TCTEX1D2-201ENST00000442633 CECR2Q9BXF3 1484 aa34.29■■■■□ 3.08
TM4SF19-TCTEX1D2-201ENST00000442633 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
TM4SF19-TCTEX1D2-201ENST00000442633 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
TM4SF19-TCTEX1D2-201ENST00000442633 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
TM4SF19-TCTEX1D2-201ENST00000442633 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
TM4SF19-TCTEX1D2-201ENST00000442633 SMARCA2P51531 1590 aa33.5■■■□□ 2.95
TM4SF19-TCTEX1D2-201ENST00000442633 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
TM4SF19-TCTEX1D2-201ENST00000442633 HMGXB3Q12766 1538 aa33.4■■■□□ 2.94
TM4SF19-TCTEX1D2-201ENST00000442633 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
TM4SF19-TCTEX1D2-201ENST00000442633 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
TM4SF19-TCTEX1D2-201ENST00000442633 WIZO95785 1651 aa33.1■■■□□ 2.89
TM4SF19-TCTEX1D2-201ENST00000442633 NESP48681 1621 aa32.96■■■□□ 2.87
TM4SF19-TCTEX1D2-201ENST00000442633 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
TM4SF19-TCTEX1D2-201ENST00000442633 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
TM4SF19-TCTEX1D2-201ENST00000442633 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
TM4SF19-TCTEX1D2-201ENST00000442633 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
TM4SF19-TCTEX1D2-201ENST00000442633 CUX2O14529 1486 aa32.61■■■□□ 2.81
TM4SF19-TCTEX1D2-201ENST00000442633 KIF21AQ7Z4S6 1674 aa32.6■■■□□ 2.81
TM4SF19-TCTEX1D2-201ENST00000442633 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
TM4SF19-TCTEX1D2-201ENST00000442633 THOC2Q8NI27 1593 aaKnown RBP32.52■■■□□ 2.8
TM4SF19-TCTEX1D2-201ENST00000442633 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
TM4SF19-TCTEX1D2-201ENST00000442633 CFTRP13569 1480 aa32.33■■■□□ 2.77
TM4SF19-TCTEX1D2-201ENST00000442633 CCDC88BA6NC98 1476 aa32.28■■■□□ 2.76
TM4SF19-TCTEX1D2-201ENST00000442633 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
TM4SF19-TCTEX1D2-201ENST00000442633 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
TM4SF19-TCTEX1D2-201ENST00000442633 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
TM4SF19-TCTEX1D2-201ENST00000442633 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
TM4SF19-TCTEX1D2-201ENST00000442633 WDR62O43379 1518 aa32.16■■■□□ 2.74
TM4SF19-TCTEX1D2-201ENST00000442633 URB2Q14146 1524 aaKnown RBP31.97■■■□□ 2.71
TM4SF19-TCTEX1D2-201ENST00000442633 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
TM4SF19-TCTEX1D2-201ENST00000442633 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
TM4SF19-TCTEX1D2-201ENST00000442633 TOPBP1Q92547 1522 aa31.7■■■□□ 2.67
TM4SF19-TCTEX1D2-201ENST00000442633 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.65
TM4SF19-TCTEX1D2-201ENST00000442633 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
TM4SF19-TCTEX1D2-201ENST00000442633 IFT140Q96RY7 1462 aa31.53■■■□□ 2.64
TM4SF19-TCTEX1D2-201ENST00000442633 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
TM4SF19-TCTEX1D2-201ENST00000442633 POLA1P09884 1462 aaPredicted RBP31.41■■■□□ 2.62
TM4SF19-TCTEX1D2-201ENST00000442633 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
TM4SF19-TCTEX1D2-201ENST00000442633 CUX1P39880 1505 aa31.38■■■□□ 2.61
TM4SF19-TCTEX1D2-201ENST00000442633 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
TM4SF19-TCTEX1D2-201ENST00000442633 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
TM4SF19-TCTEX1D2-201ENST00000442633 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
TM4SF19-TCTEX1D2-201ENST00000442633 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.59
TM4SF19-TCTEX1D2-201ENST00000442633 SOGA1O94964 1423 aa31.24■■■□□ 2.59
TM4SF19-TCTEX1D2-201ENST00000442633 OSCARQ8IYS5 282 aa31.18■■■□□ 2.58
TM4SF19-TCTEX1D2-201ENST00000442633 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
TM4SF19-TCTEX1D2-201ENST00000442633 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
TM4SF19-TCTEX1D2-201ENST00000442633 CHD1O14646 1710 aa31.09■■■□□ 2.57
TM4SF19-TCTEX1D2-201ENST00000442633 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
TM4SF19-TCTEX1D2-201ENST00000442633 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
TM4SF19-TCTEX1D2-201ENST00000442633 WRNQ14191 1432 aaPredicted RBP eCLIP31.01■■■□□ 2.55
TM4SF19-TCTEX1D2-201ENST00000442633 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
TM4SF19-TCTEX1D2-201ENST00000442633 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.55
TM4SF19-TCTEX1D2-201ENST00000442633 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
TM4SF19-TCTEX1D2-201ENST00000442633 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
TM4SF19-TCTEX1D2-201ENST00000442633 FBLN2P98095 1184 aa30.93■■■□□ 2.54
TM4SF19-TCTEX1D2-201ENST00000442633 GRIN2BQ13224 1484 aa30.92■■■□□ 2.54
TM4SF19-TCTEX1D2-201ENST00000442633 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
TM4SF19-TCTEX1D2-201ENST00000442633 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
TM4SF19-TCTEX1D2-201ENST00000442633 MAGI1Q96QZ7 1491 aaPredicted RBP30.86■■■□□ 2.53
TM4SF19-TCTEX1D2-201ENST00000442633 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
TM4SF19-TCTEX1D2-201ENST00000442633 RIMBP3CA6NJZ7 1639 aa30.83■■■□□ 2.53
TM4SF19-TCTEX1D2-201ENST00000442633 RIMBP3BA6NNM3 1639 aa30.83■■■□□ 2.53
TM4SF19-TCTEX1D2-201ENST00000442633 RIMBP3Q9UFD9 1639 aa30.83■■■□□ 2.53
TM4SF19-TCTEX1D2-201ENST00000442633 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
TM4SF19-TCTEX1D2-201ENST00000442633 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
TM4SF19-TCTEX1D2-201ENST00000442633 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
TM4SF19-TCTEX1D2-201ENST00000442633 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
TM4SF19-TCTEX1D2-201ENST00000442633 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
TM4SF19-TCTEX1D2-201ENST00000442633 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.48
TM4SF19-TCTEX1D2-201ENST00000442633 AEBP2Q6ZN18 517 aaPredicted RBP30.54■■■□□ 2.48
TM4SF19-TCTEX1D2-201ENST00000442633 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
TM4SF19-TCTEX1D2-201ENST00000442633 FHAD1B1AJZ9 1412 aa30.5■■■□□ 2.47
TM4SF19-TCTEX1D2-201ENST00000442633 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
TM4SF19-TCTEX1D2-201ENST00000442633 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
TM4SF19-TCTEX1D2-201ENST00000442633 CEP170Q5SW79 1584 aa30.45■■■□□ 2.47
TM4SF19-TCTEX1D2-201ENST00000442633 NUP160Q12769 1436 aa30.4■■■□□ 2.46
TM4SF19-TCTEX1D2-201ENST00000442633 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
TM4SF19-TCTEX1D2-201ENST00000442633 IGF1RP08069 1367 aa30.29■■■□□ 2.44
TM4SF19-TCTEX1D2-201ENST00000442633 ERCC6L2Q5T890 1561 aa30.28■■■□□ 2.44
TM4SF19-TCTEX1D2-201ENST00000442633 CUL7Q14999 1698 aa30.26■■■□□ 2.43
TM4SF19-TCTEX1D2-201ENST00000442633 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
TM4SF19-TCTEX1D2-201ENST00000442633 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms