RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
CRAMP1-201ENST00000293925 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
CRAMP1-201ENST00000293925 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
CRAMP1-201ENST00000293925 EHMT2Q96KQ7 1210 aa25.62■■□□□ 1.69
CRAMP1-201ENST00000293925 ERICH6Q7L0X2 663 aa25.55■■□□□ 1.68
CRAMP1-201ENST00000293925 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
CRAMP1-201ENST00000293925 APLP2Q06481 763 aa25.08■■□□□ 1.61
CRAMP1-201ENST00000293925 CENPBP07199 599 aaPredicted RBP24.97■■□□□ 1.59
CRAMP1-201ENST00000293925 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
CRAMP1-201ENST00000293925 MYT1Q01538 1121 aa24.86■■□□□ 1.57
CRAMP1-201ENST00000293925 TTBK1Q5TCY1 1321 aaPredicted RBP24.84■■□□□ 1.57
CRAMP1-201ENST00000293925 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
CRAMP1-201ENST00000293925 NEFLP07196 543 aa24.56■■□□□ 1.52
CRAMP1-201ENST00000293925 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
CRAMP1-201ENST00000293925 YTHDC1Q96MU7 727 aaKnown RBP24.44■■□□□ 1.5
CRAMP1-201ENST00000293925 ZEB1P37275 1124 aaPredicted RBP24.37■■□□□ 1.49
CRAMP1-201ENST00000293925 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
CRAMP1-201ENST00000293925 DAXXQ9UER7 740 aaPredicted RBP24.21■■□□□ 1.47
CRAMP1-201ENST00000293925 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
CRAMP1-201ENST00000293925 UBTFP17480 764 aaKnown RBP23.69■■□□□ 1.38
CRAMP1-201ENST00000293925 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
CRAMP1-201ENST00000293925 RTL5Q5HYW3 569 aaPredicted RBP23.64■■□□□ 1.37
CRAMP1-201ENST00000293925 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
CRAMP1-201ENST00000293925 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
CRAMP1-201ENST00000293925 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
CRAMP1-201ENST00000293925 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
CRAMP1-201ENST00000293925 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
CRAMP1-201ENST00000293925 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
CRAMP1-201ENST00000293925 HRCP23327 699 aa23.35■■□□□ 1.33
CRAMP1-201ENST00000293925 ITGAEP38570 1179 aa23.28■■□□□ 1.32
CRAMP1-201ENST00000293925 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
CRAMP1-201ENST00000293925 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
CRAMP1-201ENST00000293925 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
CRAMP1-201ENST00000293925 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
CRAMP1-201ENST00000293925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
CRAMP1-201ENST00000293925 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
CRAMP1-201ENST00000293925 BCANQ96GW7 911 aa22.96■■□□□ 1.27
CRAMP1-201ENST00000293925 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
CRAMP1-201ENST00000293925 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
CRAMP1-201ENST00000293925 EIF5BO60841 1220 aaKnown RBP22.82■■□□□ 1.24
CRAMP1-201ENST00000293925 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
CRAMP1-201ENST00000293925 BCL11AQ9H165 835 aa22.78■■□□□ 1.24
CRAMP1-201ENST00000293925 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
CRAMP1-201ENST00000293925 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
CRAMP1-201ENST00000293925 SLC24A1O60721 1099 aa22.57■■□□□ 1.2
CRAMP1-201ENST00000293925 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
CRAMP1-201ENST00000293925 ANP32AP39687 249 aaKnown RBP22.54■■□□□ 1.2
CRAMP1-201ENST00000293925 GLIPR1L2Q4G1C9 344 aa22.52■■□□□ 1.2
CRAMP1-201ENST00000293925 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
CRAMP1-201ENST00000293925 ANP32CO43423 234 aa22.5■■□□□ 1.19
CRAMP1-201ENST00000293925 ANP32BQ92688 251 aaKnown RBP22.49■■□□□ 1.19
CRAMP1-201ENST00000293925 NPM2Q86SE8 214 aaKnown RBP22.49■■□□□ 1.19
CRAMP1-201ENST00000293925 FAM50AQ14320 339 aaKnown RBP22.46■■□□□ 1.19
CRAMP1-201ENST00000293925 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
CRAMP1-201ENST00000293925 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
CRAMP1-201ENST00000293925 HSP90AA1P07900 732 aaKnown RBP22.31■■□□□ 1.16
CRAMP1-201ENST00000293925 NEFMP07197 916 aa22.24■■□□□ 1.15
CRAMP1-201ENST00000293925 ARXQ96QS3 562 aa22.17■■□□□ 1.14
CRAMP1-201ENST00000293925 NBR1Q14596 966 aa22.15■■□□□ 1.14
CRAMP1-201ENST00000293925 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
CRAMP1-201ENST00000293925 UPF2Q9HAU5 1272 aaKnown RBP22.09■■□□□ 1.13
CRAMP1-201ENST00000293925 FKBP8Q14318 412 aa22.05■■□□□ 1.12
CRAMP1-201ENST00000293925 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
CRAMP1-201ENST00000293925 SALL2Q9Y467 1007 aaPredicted RBP21.8■■□□□ 1.08
CRAMP1-201ENST00000293925 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
CRAMP1-201ENST00000293925 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
CRAMP1-201ENST00000293925 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
CRAMP1-201ENST00000293925 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
CRAMP1-201ENST00000293925 TRIM44Q96DX7 344 aaPredicted RBP21.73■■□□□ 1.07
CRAMP1-201ENST00000293925 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
CRAMP1-201ENST00000293925 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
CRAMP1-201ENST00000293925 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
CRAMP1-201ENST00000293925 FBLN2P98095 1184 aa21.55■■□□□ 1.04
CRAMP1-201ENST00000293925 DNTTIP2Q5QJE6 756 aaKnown RBP21.55■■□□□ 1.04
CRAMP1-201ENST00000293925 NCLP19338 710 aaKnown RBP21.54■■□□□ 1.04
CRAMP1-201ENST00000293925 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
CRAMP1-201ENST00000293925 TMC1Q8TDI8 760 aa21.53■■□□□ 1.04
CRAMP1-201ENST00000293925 PTMAP06454 111 aaKnown RBP21.51■■□□□ 1.03
CRAMP1-201ENST00000293925 ZNF777Q9ULD5 760 aaPredicted RBP21.51■■□□□ 1.03
CRAMP1-201ENST00000293925 BECN1Q14457 450 aa21.48■■□□□ 1.03
CRAMP1-201ENST00000293925 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
CRAMP1-201ENST00000293925 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
CRAMP1-201ENST00000293925 TONSLQ96HA7 1378 aa21.47■■□□□ 1.03
CRAMP1-201ENST00000293925 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
CRAMP1-201ENST00000293925 NAP1L5Q96NT1 182 aaPredicted RBP21.46■■□□□ 1.03
CRAMP1-201ENST00000293925 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.02
CRAMP1-201ENST00000293925 GOLGA6L22H0YM25 854 aa21.45■■□□□ 1.02
CRAMP1-201ENST00000293925 WDR43Q15061 677 aaKnown RBP eCLIP21.44■■□□□ 1.02
CRAMP1-201ENST00000293925 ANP32EQ9BTT0 268 aa21.44■■□□□ 1.02
CRAMP1-201ENST00000293925 RTN4Q9NQC3 1192 aaKnown RBP21.44■■□□□ 1.02
CRAMP1-201ENST00000293925 TPRNQ4KMQ1 711 aa21.44■■□□□ 1.02
CRAMP1-201ENST00000293925 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
CRAMP1-201ENST00000293925 ZRSR1Q15695 479 aaKnown RBP21.4■■□□□ 1.02
CRAMP1-201ENST00000293925 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
CRAMP1-201ENST00000293925 TULP1O00294 542 aaPredicted RBP21.39■■□□□ 1.01
CRAMP1-201ENST00000293925 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
CRAMP1-201ENST00000293925 AMER1Q5JTC6 1135 aaPredicted RBP21.37■■□□□ 1.01
CRAMP1-201ENST00000293925 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
CRAMP1-201ENST00000293925 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
CRAMP1-201ENST00000293925 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms