RNA–Protein interactions for RNA: ENST00000585101.5

ATPAF2-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 4 BASIC

Gene ATPAF2, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-213ENST00000585101 NISCHQ9Y2I1 1504 aa43.27■■■■■ 4.52
ATPAF2-213ENST00000585101 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
ATPAF2-213ENST00000585101 ABCC9O60706 1549 aa38.25■■■■□ 3.71
ATPAF2-213ENST00000585101 DCAF8L2P0C7V8 631 aa36.52■■■■□ 3.44
ATPAF2-213ENST00000585101 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
ATPAF2-213ENST00000585101 NACADO15069 1562 aa36.32■■■■□ 3.4
ATPAF2-213ENST00000585101 ZCCHC6Q5VYS8 1495 aaKnown RBP35.95■■■■□ 3.35
ATPAF2-213ENST00000585101 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
ATPAF2-213ENST00000585101 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
ATPAF2-213ENST00000585101 PABPN1Q86U42 306 aaKnown RBP eCLIP35.74■■■■□ 3.31
ATPAF2-213ENST00000585101 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
ATPAF2-213ENST00000585101 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
ATPAF2-213ENST00000585101 DNAJC5BQ9UF47 199 aa35.47■■■■□ 3.27
ATPAF2-213ENST00000585101 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
ATPAF2-213ENST00000585101 SHROOM4Q9ULL8 1493 aa34.8■■■■□ 3.16
ATPAF2-213ENST00000585101 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
ATPAF2-213ENST00000585101 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
ATPAF2-213ENST00000585101 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
ATPAF2-213ENST00000585101 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
ATPAF2-213ENST00000585101 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
ATPAF2-213ENST00000585101 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
ATPAF2-213ENST00000585101 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
ATPAF2-213ENST00000585101 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
ATPAF2-213ENST00000585101 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
ATPAF2-213ENST00000585101 HMGXB3Q12766 1538 aa33.32■■■□□ 2.92
ATPAF2-213ENST00000585101 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
ATPAF2-213ENST00000585101 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
ATPAF2-213ENST00000585101 WIZO95785 1651 aa33.1■■■□□ 2.89
ATPAF2-213ENST00000585101 NESP48681 1621 aa33.02■■■□□ 2.88
ATPAF2-213ENST00000585101 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
ATPAF2-213ENST00000585101 RSF1Q96T23 1441 aaPredicted RBP32.86■■■□□ 2.85
ATPAF2-213ENST00000585101 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.83
ATPAF2-213ENST00000585101 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
ATPAF2-213ENST00000585101 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
ATPAF2-213ENST00000585101 CUX2O14529 1486 aa32.58■■■□□ 2.81
ATPAF2-213ENST00000585101 CADPSQ9ULU8 1353 aa32.56■■■□□ 2.8
ATPAF2-213ENST00000585101 THOC2Q8NI27 1593 aaKnown RBP32.5■■■□□ 2.79
ATPAF2-213ENST00000585101 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
ATPAF2-213ENST00000585101 CFTRP13569 1480 aa32.29■■■□□ 2.76
ATPAF2-213ENST00000585101 CCDC88BA6NC98 1476 aa32.28■■■□□ 2.76
ATPAF2-213ENST00000585101 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
ATPAF2-213ENST00000585101 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
ATPAF2-213ENST00000585101 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
ATPAF2-213ENST00000585101 WDR62O43379 1518 aa32.11■■■□□ 2.73
ATPAF2-213ENST00000585101 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
ATPAF2-213ENST00000585101 DNAJC5Q9H3Z4 198 aa32.06■■■□□ 2.72
ATPAF2-213ENST00000585101 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
ATPAF2-213ENST00000585101 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
ATPAF2-213ENST00000585101 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
ATPAF2-213ENST00000585101 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
ATPAF2-213ENST00000585101 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
ATPAF2-213ENST00000585101 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
ATPAF2-213ENST00000585101 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
ATPAF2-213ENST00000585101 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
ATPAF2-213ENST00000585101 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
ATPAF2-213ENST00000585101 CUX1P39880 1505 aa31.36■■■□□ 2.61
ATPAF2-213ENST00000585101 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
ATPAF2-213ENST00000585101 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
ATPAF2-213ENST00000585101 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.6
ATPAF2-213ENST00000585101 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
ATPAF2-213ENST00000585101 SOGA1O94964 1423 aa31.27■■■□□ 2.6
ATPAF2-213ENST00000585101 OSCARQ8IYS5 282 aa31.25■■■□□ 2.59
ATPAF2-213ENST00000585101 TDRD9Q8NDG6 1382 aaKnown RBP31.2■■■□□ 2.59
ATPAF2-213ENST00000585101 CHD1O14646 1710 aa31.09■■■□□ 2.57
ATPAF2-213ENST00000585101 FBLN2P98095 1184 aa31.06■■■□□ 2.56
ATPAF2-213ENST00000585101 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
ATPAF2-213ENST00000585101 WDR97A6NE52 1622 aa31.05■■■□□ 2.56
ATPAF2-213ENST00000585101 SYNJ1O43426 1573 aa31■■■□□ 2.55
ATPAF2-213ENST00000585101 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
ATPAF2-213ENST00000585101 SNAPC4Q5SXM2 1469 aa30.98■■■□□ 2.55
ATPAF2-213ENST00000585101 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
ATPAF2-213ENST00000585101 TOP2BQ02880 1626 aa30.95■■■□□ 2.54
ATPAF2-213ENST00000585101 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
ATPAF2-213ENST00000585101 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
ATPAF2-213ENST00000585101 GRIN2BQ13224 1484 aa30.89■■■□□ 2.54
ATPAF2-213ENST00000585101 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
ATPAF2-213ENST00000585101 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
ATPAF2-213ENST00000585101 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
ATPAF2-213ENST00000585101 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
ATPAF2-213ENST00000585101 ABCA5Q8WWZ7 1642 aa30.85■■■□□ 2.53
ATPAF2-213ENST00000585101 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
ATPAF2-213ENST00000585101 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
ATPAF2-213ENST00000585101 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
ATPAF2-213ENST00000585101 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
ATPAF2-213ENST00000585101 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
ATPAF2-213ENST00000585101 ADAMTS12P58397 1594 aa30.59■■■□□ 2.49
ATPAF2-213ENST00000585101 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
ATPAF2-213ENST00000585101 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
ATPAF2-213ENST00000585101 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
ATPAF2-213ENST00000585101 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
ATPAF2-213ENST00000585101 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
ATPAF2-213ENST00000585101 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
ATPAF2-213ENST00000585101 NUP160Q12769 1436 aa30.36■■■□□ 2.45
ATPAF2-213ENST00000585101 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.45
ATPAF2-213ENST00000585101 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
ATPAF2-213ENST00000585101 IGF1RP08069 1367 aa30.28■■■□□ 2.44
ATPAF2-213ENST00000585101 SHROOM2Q13796 1616 aa30.19■■■□□ 2.42
ATPAF2-213ENST00000585101 CUL7Q14999 1698 aa30.19■■■□□ 2.42
ATPAF2-213ENST00000585101 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
ATPAF2-213ENST00000585101 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms