RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 NISCHQ9Y2I1 1504 aa43.82■■■■■ 4.61
EFCAB11-211ENST00000556609 CCDC180Q9P1Z9 1646 aa39.11■■■■□ 3.85
EFCAB11-211ENST00000556609 ABCC9O60706 1549 aa38.78■■■■□ 3.8
EFCAB11-211ENST00000556609 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
EFCAB11-211ENST00000556609 NACADO15069 1562 aa37■■■■□ 3.51
EFCAB11-211ENST00000556609 DCAF8L2P0C7V8 631 aa36.91■■■■□ 3.5
EFCAB11-211ENST00000556609 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
EFCAB11-211ENST00000556609 ZCCHC6Q5VYS8 1495 aaKnown RBP36.36■■■■□ 3.41
EFCAB11-211ENST00000556609 DCAF1Q9Y4B6 1507 aa36.29■■■■□ 3.4
EFCAB11-211ENST00000556609 PABPN1Q86U42 306 aaKnown RBP eCLIP36.22■■■■□ 3.39
EFCAB11-211ENST00000556609 DNAJC5BQ9UF47 199 aa36.08■■■■□ 3.37
EFCAB11-211ENST00000556609 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.36
EFCAB11-211ENST00000556609 BICRAQ9NZM4 1560 aa35.91■■■■□ 3.34
EFCAB11-211ENST00000556609 SHROOM4Q9ULL8 1493 aa35.7■■■■□ 3.31
EFCAB11-211ENST00000556609 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
EFCAB11-211ENST00000556609 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
EFCAB11-211ENST00000556609 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
EFCAB11-211ENST00000556609 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
EFCAB11-211ENST00000556609 NCAPD3P42695 1498 aa34.18■■■■□ 3.06
EFCAB11-211ENST00000556609 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.04
EFCAB11-211ENST00000556609 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
EFCAB11-211ENST00000556609 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
EFCAB11-211ENST00000556609 BAZ1AQ9NRL2 1556 aaPredicted RBP34.01■■■■□ 3.03
EFCAB11-211ENST00000556609 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
EFCAB11-211ENST00000556609 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
EFCAB11-211ENST00000556609 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
EFCAB11-211ENST00000556609 MROH2BQ7Z745 1585 aa33.69■■■□□ 2.98
EFCAB11-211ENST00000556609 ERCC6Q03468 1493 aa33.55■■■□□ 2.96
EFCAB11-211ENST00000556609 CUX2O14529 1486 aa33.4■■■□□ 2.94
EFCAB11-211ENST00000556609 NESP48681 1621 aa33.36■■■□□ 2.93
EFCAB11-211ENST00000556609 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
EFCAB11-211ENST00000556609 WIZO95785 1651 aa33.23■■■□□ 2.91
EFCAB11-211ENST00000556609 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
EFCAB11-211ENST00000556609 PDS5BQ9NTI5 1447 aa33.2■■■□□ 2.91
EFCAB11-211ENST00000556609 CADPSQ9ULU8 1353 aa33.18■■■□□ 2.9
EFCAB11-211ENST00000556609 DNAJC5Q9H3Z4 198 aa33.03■■■□□ 2.88
EFCAB11-211ENST00000556609 TOP2AP11388 1531 aaKnown RBP32.96■■■□□ 2.87
EFCAB11-211ENST00000556609 THOC2Q8NI27 1593 aaKnown RBP32.93■■■□□ 2.86
EFCAB11-211ENST00000556609 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
EFCAB11-211ENST00000556609 CFTRP13569 1480 aa32.82■■■□□ 2.84
EFCAB11-211ENST00000556609 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
EFCAB11-211ENST00000556609 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
EFCAB11-211ENST00000556609 FANCD2Q9BXW9 1451 aa32.73■■■□□ 2.83
EFCAB11-211ENST00000556609 WDR62O43379 1518 aa32.66■■■□□ 2.82
EFCAB11-211ENST00000556609 CCDC88BA6NC98 1476 aa32.6■■■□□ 2.81
EFCAB11-211ENST00000556609 URB2Q14146 1524 aaKnown RBP32.37■■■□□ 2.77
EFCAB11-211ENST00000556609 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
EFCAB11-211ENST00000556609 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
EFCAB11-211ENST00000556609 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
EFCAB11-211ENST00000556609 TOPBP1Q92547 1522 aa32.11■■■□□ 2.73
EFCAB11-211ENST00000556609 DNMBPQ6XZF7 1577 aa32.02■■■□□ 2.72
EFCAB11-211ENST00000556609 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
EFCAB11-211ENST00000556609 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
EFCAB11-211ENST00000556609 ZNF608Q9ULD9 1512 aaPredicted RBP31.9■■■□□ 2.7
EFCAB11-211ENST00000556609 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
EFCAB11-211ENST00000556609 SOGA1O94964 1423 aa31.75■■■□□ 2.67
EFCAB11-211ENST00000556609 TARBP1Q13395 1621 aaKnown RBP31.74■■■□□ 2.67
EFCAB11-211ENST00000556609 AQRO60306 1485 aaKnown RBP eCLIP31.71■■■□□ 2.67
EFCAB11-211ENST00000556609 EIF4G3O43432 1585 aaKnown RBP31.7■■■□□ 2.67
EFCAB11-211ENST00000556609 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
EFCAB11-211ENST00000556609 TRIM41Q8WV44 630 aa31.65■■■□□ 2.66
EFCAB11-211ENST00000556609 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
EFCAB11-211ENST00000556609 CUX1P39880 1505 aa31.65■■■□□ 2.66
EFCAB11-211ENST00000556609 TDRD9Q8NDG6 1382 aaKnown RBP31.6■■■□□ 2.65
EFCAB11-211ENST00000556609 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
EFCAB11-211ENST00000556609 FBLN2P98095 1184 aa31.52■■■□□ 2.64
EFCAB11-211ENST00000556609 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
EFCAB11-211ENST00000556609 CHMP7Q8WUX9 453 aaPredicted RBP31.4■■■□□ 2.62
EFCAB11-211ENST00000556609 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
EFCAB11-211ENST00000556609 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
EFCAB11-211ENST00000556609 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
EFCAB11-211ENST00000556609 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
EFCAB11-211ENST00000556609 GAPVD1Q14C86 1478 aa31.34■■■□□ 2.61
EFCAB11-211ENST00000556609 CHD1O14646 1710 aa31.33■■■□□ 2.61
EFCAB11-211ENST00000556609 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
EFCAB11-211ENST00000556609 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
EFCAB11-211ENST00000556609 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
EFCAB11-211ENST00000556609 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
EFCAB11-211ENST00000556609 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
EFCAB11-211ENST00000556609 TOP2BQ02880 1626 aa31.25■■■□□ 2.59
EFCAB11-211ENST00000556609 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.58
EFCAB11-211ENST00000556609 SYNJ1O43426 1573 aa31.18■■■□□ 2.58
EFCAB11-211ENST00000556609 CYB5RLQ6IPT4 315 aa31.18■■■□□ 2.58
EFCAB11-211ENST00000556609 ABCA5Q8WWZ7 1642 aa31.17■■■□□ 2.58
EFCAB11-211ENST00000556609 PBRM1Q86U86 1689 aa31.12■■■□□ 2.57
EFCAB11-211ENST00000556609 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
EFCAB11-211ENST00000556609 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
EFCAB11-211ENST00000556609 FHAD1B1AJZ9 1412 aa31■■■□□ 2.55
EFCAB11-211ENST00000556609 ERICH3Q5RHP9 1530 aa30.98■■■□□ 2.55
EFCAB11-211ENST00000556609 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
EFCAB11-211ENST00000556609 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
EFCAB11-211ENST00000556609 NUP160Q12769 1436 aa30.88■■■□□ 2.53
EFCAB11-211ENST00000556609 KIF27Q86VH2 1401 aa30.79■■■□□ 2.52
EFCAB11-211ENST00000556609 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
EFCAB11-211ENST00000556609 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
EFCAB11-211ENST00000556609 IGF1RP08069 1367 aa30.71■■■□□ 2.51
EFCAB11-211ENST00000556609 JPH4Q96JJ6 628 aa30.66■■■□□ 2.5
EFCAB11-211ENST00000556609 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
EFCAB11-211ENST00000556609 PRG4Q92954 1404 aaPredicted RBP30.57■■■□□ 2.48
EFCAB11-211ENST00000556609 ERCC6L2Q5T890 1561 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms