RNA–Protein interactions for RNA: ENST00000291232.4

TNFRSF13C-201, Transcript of TNF receptor superfamily member 13C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF13C, Length 3,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF13C-201ENST00000291232 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
TNFRSF13C-201ENST00000291232 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
TNFRSF13C-201ENST00000291232 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
TNFRSF13C-201ENST00000291232 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
TNFRSF13C-201ENST00000291232 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
TNFRSF13C-201ENST00000291232 PCGF6Q9BYE7 350 aa26.49■■□□□ 1.83
TNFRSF13C-201ENST00000291232 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
TNFRSF13C-201ENST00000291232 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
TNFRSF13C-201ENST00000291232 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
TNFRSF13C-201ENST00000291232 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF13C-201ENST00000291232 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
TNFRSF13C-201ENST00000291232 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
TNFRSF13C-201ENST00000291232 HRCP23327 699 aa25.58■■□□□ 1.69
TNFRSF13C-201ENST00000291232 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
TNFRSF13C-201ENST00000291232 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
TNFRSF13C-201ENST00000291232 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF13C-201ENST00000291232 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
TNFRSF13C-201ENST00000291232 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
TNFRSF13C-201ENST00000291232 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
TNFRSF13C-201ENST00000291232 ZEB1P37275 1124 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF13C-201ENST00000291232 APLP2Q06481 763 aa24.91■■□□□ 1.58
TNFRSF13C-201ENST00000291232 ABCC9O60706 1549 aa24.87■■□□□ 1.57
TNFRSF13C-201ENST00000291232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
TNFRSF13C-201ENST00000291232 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
TNFRSF13C-201ENST00000291232 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
TNFRSF13C-201ENST00000291232 HNRNPUL2Q1KMD3 747 aaKnown RBP24.53■■□□□ 1.52
TNFRSF13C-201ENST00000291232 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
TNFRSF13C-201ENST00000291232 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
TNFRSF13C-201ENST00000291232 CENPBP07199 599 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF13C-201ENST00000291232 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
TNFRSF13C-201ENST00000291232 ITGAEP38570 1179 aa24.32■■□□□ 1.48
TNFRSF13C-201ENST00000291232 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
TNFRSF13C-201ENST00000291232 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
TNFRSF13C-201ENST00000291232 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF13C-201ENST00000291232 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
TNFRSF13C-201ENST00000291232 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
TNFRSF13C-201ENST00000291232 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.42
TNFRSF13C-201ENST00000291232 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
TNFRSF13C-201ENST00000291232 SCAF1Q9H7N4 1312 aaKnown RBP23.7■■□□□ 1.39
TNFRSF13C-201ENST00000291232 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.38
TNFRSF13C-201ENST00000291232 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF13C-201ENST00000291232 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
TNFRSF13C-201ENST00000291232 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
TNFRSF13C-201ENST00000291232 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
TNFRSF13C-201ENST00000291232 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
TNFRSF13C-201ENST00000291232 CNGB1Q14028 1251 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF13C-201ENST00000291232 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
TNFRSF13C-201ENST00000291232 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
TNFRSF13C-201ENST00000291232 SOGA1O94964 1423 aa23.43■■□□□ 1.34
TNFRSF13C-201ENST00000291232 MIER1Q8N108 512 aa23.39■■□□□ 1.33
TNFRSF13C-201ENST00000291232 BCANQ96GW7 911 aa23.38■■□□□ 1.33
TNFRSF13C-201ENST00000291232 NEFLP07196 543 aa23.38■■□□□ 1.33
TNFRSF13C-201ENST00000291232 POLR3GLQ9BT43 218 aa23.34■■□□□ 1.33
TNFRSF13C-201ENST00000291232 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
TNFRSF13C-201ENST00000291232 NACADO15069 1562 aa23.31■■□□□ 1.32
TNFRSF13C-201ENST00000291232 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
TNFRSF13C-201ENST00000291232 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
TNFRSF13C-201ENST00000291232 CLIP1P30622 1438 aa23.28■■□□□ 1.32
TNFRSF13C-201ENST00000291232 WIZO95785 1651 aa23.26■■□□□ 1.31
TNFRSF13C-201ENST00000291232 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
TNFRSF13C-201ENST00000291232 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF13C-201ENST00000291232 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
TNFRSF13C-201ENST00000291232 BAZ1AQ9NRL2 1556 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF13C-201ENST00000291232 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
TNFRSF13C-201ENST00000291232 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
TNFRSF13C-201ENST00000291232 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
TNFRSF13C-201ENST00000291232 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
TNFRSF13C-201ENST00000291232 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
TNFRSF13C-201ENST00000291232 EEA1Q15075 1411 aa22.98■■□□□ 1.27
TNFRSF13C-201ENST00000291232 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
TNFRSF13C-201ENST00000291232 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
TNFRSF13C-201ENST00000291232 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF13C-201ENST00000291232 ANP32CO43423 234 aa22.93■■□□□ 1.26
TNFRSF13C-201ENST00000291232 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
TNFRSF13C-201ENST00000291232 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
TNFRSF13C-201ENST00000291232 FBLN2P98095 1184 aa22.87■■□□□ 1.25
TNFRSF13C-201ENST00000291232 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
TNFRSF13C-201ENST00000291232 FKBP8Q14318 412 aa22.83■■□□□ 1.24
TNFRSF13C-201ENST00000291232 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
TNFRSF13C-201ENST00000291232 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF13C-201ENST00000291232 MYT1Q01538 1121 aa22.72■■□□□ 1.23
TNFRSF13C-201ENST00000291232 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
TNFRSF13C-201ENST00000291232 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
TNFRSF13C-201ENST00000291232 RAPGEF2Q9Y4G8 1499 aa22.69■■□□□ 1.22
TNFRSF13C-201ENST00000291232 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
TNFRSF13C-201ENST00000291232 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
TNFRSF13C-201ENST00000291232 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
TNFRSF13C-201ENST00000291232 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
TNFRSF13C-201ENST00000291232 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF13C-201ENST00000291232 HNRNPUQ00839 825 aaKnown RBP eCLIP22.65■■□□□ 1.22
TNFRSF13C-201ENST00000291232 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
TNFRSF13C-201ENST00000291232 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
TNFRSF13C-201ENST00000291232 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
TNFRSF13C-201ENST00000291232 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
TNFRSF13C-201ENST00000291232 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
TNFRSF13C-201ENST00000291232 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
TNFRSF13C-201ENST00000291232 CUX2O14529 1486 aa22.52■■□□□ 1.2
TNFRSF13C-201ENST00000291232 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
TNFRSF13C-201ENST00000291232 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
TNFRSF13C-201ENST00000291232 SUPT16HQ9Y5B9 1047 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms