RNA–Protein interactions for RNA: ENST00000315190.3

SERTM1-201, Transcript of serine rich and transmembrane domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERTM1, Length 3,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERTM1-201ENST00000315190 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
SERTM1-201ENST00000315190 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
SERTM1-201ENST00000315190 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
SERTM1-201ENST00000315190 HRCP23327 699 aa27.61■■■□□ 2.01
SERTM1-201ENST00000315190 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
SERTM1-201ENST00000315190 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
SERTM1-201ENST00000315190 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
SERTM1-201ENST00000315190 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
SERTM1-201ENST00000315190 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
SERTM1-201ENST00000315190 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
SERTM1-201ENST00000315190 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
SERTM1-201ENST00000315190 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
SERTM1-201ENST00000315190 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
SERTM1-201ENST00000315190 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
SERTM1-201ENST00000315190 PELP1Q8IZL8 1130 aaKnown RBP26.09■■□□□ 1.77
SERTM1-201ENST00000315190 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
SERTM1-201ENST00000315190 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
SERTM1-201ENST00000315190 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
SERTM1-201ENST00000315190 ZEB1P37275 1124 aaPredicted RBP25.82■■□□□ 1.72
SERTM1-201ENST00000315190 TRIM41Q8WV44 630 aa25.58■■□□□ 1.68
SERTM1-201ENST00000315190 NEUROD1Q13562 356 aa25.56■■□□□ 1.68
SERTM1-201ENST00000315190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
SERTM1-201ENST00000315190 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
SERTM1-201ENST00000315190 GTF3C3Q9Y5Q9 886 aa25.42■■□□□ 1.66
SERTM1-201ENST00000315190 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
SERTM1-201ENST00000315190 TTBK1Q5TCY1 1321 aaPredicted RBP25.33■■□□□ 1.65
SERTM1-201ENST00000315190 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
SERTM1-201ENST00000315190 CENPBP07199 599 aaPredicted RBP25.13■■□□□ 1.61
SERTM1-201ENST00000315190 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
SERTM1-201ENST00000315190 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
SERTM1-201ENST00000315190 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
SERTM1-201ENST00000315190 ABCC9O60706 1549 aa24.96■■□□□ 1.59
SERTM1-201ENST00000315190 MYT1Q01538 1121 aa24.88■■□□□ 1.57
SERTM1-201ENST00000315190 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
SERTM1-201ENST00000315190 ZNF316A6NFI3 1004 aaPredicted RBP24.66■■□□□ 1.54
SERTM1-201ENST00000315190 MIER1Q8N108 512 aa24.65■■□□□ 1.54
SERTM1-201ENST00000315190 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
SERTM1-201ENST00000315190 HNRNPUL2Q1KMD3 747 aaKnown RBP24.48■■□□□ 1.51
SERTM1-201ENST00000315190 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.49
SERTM1-201ENST00000315190 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
SERTM1-201ENST00000315190 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
SERTM1-201ENST00000315190 WIZO95785 1651 aa24.3■■□□□ 1.48
SERTM1-201ENST00000315190 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
SERTM1-201ENST00000315190 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
SERTM1-201ENST00000315190 SOGA1O94964 1423 aa24.21■■□□□ 1.47
SERTM1-201ENST00000315190 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.47
SERTM1-201ENST00000315190 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
SERTM1-201ENST00000315190 SUPT16HQ9Y5B9 1047 aaKnown RBP24.12■■□□□ 1.45
SERTM1-201ENST00000315190 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
SERTM1-201ENST00000315190 CSRNP3Q8WYN3 585 aa24.08■■□□□ 1.44
SERTM1-201ENST00000315190 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
SERTM1-201ENST00000315190 BCANQ96GW7 911 aa23.98■■□□□ 1.43
SERTM1-201ENST00000315190 TSHZ2Q9NRE2 1034 aa23.97■■□□□ 1.43
SERTM1-201ENST00000315190 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
SERTM1-201ENST00000315190 APLP2Q06481 763 aa23.89■■□□□ 1.41
SERTM1-201ENST00000315190 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
SERTM1-201ENST00000315190 ANP32EQ9BTT0 268 aa23.87■■□□□ 1.41
SERTM1-201ENST00000315190 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
SERTM1-201ENST00000315190 BCL11AQ9H165 835 aa23.81■■□□□ 1.4
SERTM1-201ENST00000315190 GOLGA3Q08378 1498 aa23.78■■□□□ 1.4
SERTM1-201ENST00000315190 CLIP1P30622 1438 aa23.73■■□□□ 1.39
SERTM1-201ENST00000315190 NACADO15069 1562 aa23.69■■□□□ 1.38
SERTM1-201ENST00000315190 ITGAEP38570 1179 aa23.67■■□□□ 1.38
SERTM1-201ENST00000315190 FKBP8Q14318 412 aa23.65■■□□□ 1.38
SERTM1-201ENST00000315190 SMARCA2P51531 1590 aa23.63■■□□□ 1.37
SERTM1-201ENST00000315190 EEA1Q15075 1411 aa23.63■■□□□ 1.37
SERTM1-201ENST00000315190 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
SERTM1-201ENST00000315190 DHX57Q6P158 1386 aaKnown RBP23.62■■□□□ 1.37
SERTM1-201ENST00000315190 CLSPNQ9HAW4 1339 aa23.62■■□□□ 1.37
SERTM1-201ENST00000315190 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
SERTM1-201ENST00000315190 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
SERTM1-201ENST00000315190 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
SERTM1-201ENST00000315190 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
SERTM1-201ENST00000315190 DDX10Q13206 875 aaKnown RBP23.47■■□□□ 1.35
SERTM1-201ENST00000315190 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
SERTM1-201ENST00000315190 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
SERTM1-201ENST00000315190 RBM19Q9Y4C8 960 aaKnown RBP23.44■■□□□ 1.34
SERTM1-201ENST00000315190 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
SERTM1-201ENST00000315190 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
SERTM1-201ENST00000315190 KIF21BO75037 1637 aa23.36■■□□□ 1.33
SERTM1-201ENST00000315190 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
SERTM1-201ENST00000315190 NEFLP07196 543 aa23.35■■□□□ 1.33
SERTM1-201ENST00000315190 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
SERTM1-201ENST00000315190 IRX6P78412 446 aaPredicted RBP23.26■■□□□ 1.31
SERTM1-201ENST00000315190 MSH5O43196 834 aa23.25■■□□□ 1.31
SERTM1-201ENST00000315190 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
SERTM1-201ENST00000315190 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.3
SERTM1-201ENST00000315190 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
SERTM1-201ENST00000315190 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
SERTM1-201ENST00000315190 ERICH6Q7L0X2 663 aa23.09■■□□□ 1.29
SERTM1-201ENST00000315190 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
SERTM1-201ENST00000315190 ANP32CO43423 234 aa23.06■■□□□ 1.28
SERTM1-201ENST00000315190 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
SERTM1-201ENST00000315190 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
SERTM1-201ENST00000315190 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
SERTM1-201ENST00000315190 MAPKBP1O60336 1514 aa23.01■■□□□ 1.27
SERTM1-201ENST00000315190 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
SERTM1-201ENST00000315190 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
SERTM1-201ENST00000315190 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
SERTM1-201ENST00000315190 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms