RNA–Protein interactions for RNA: ENST00000341385.4

DFFB-203, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 5 BASIC

Gene DFFB, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-203ENST00000341385 NISCHQ9Y2I1 1504 aa43.67■■■■■ 4.58
DFFB-203ENST00000341385 CCDC180Q9P1Z9 1646 aa38.88■■■■□ 3.81
DFFB-203ENST00000341385 ABCC9O60706 1549 aa38.8■■■■□ 3.8
DFFB-203ENST00000341385 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.52
DFFB-203ENST00000341385 RB1CC1Q8TDY2 1594 aa36.97■■■■□ 3.51
DFFB-203ENST00000341385 NACADO15069 1562 aa36.8■■■■□ 3.48
DFFB-203ENST00000341385 MYO15BQ96JP2 1530 aa36.37■■■■□ 3.41
DFFB-203ENST00000341385 PABPN1Q86U42 306 aaKnown RBP eCLIP36.31■■■■□ 3.4
DFFB-203ENST00000341385 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
DFFB-203ENST00000341385 DNAJC5BQ9UF47 199 aa36.21■■■■□ 3.39
DFFB-203ENST00000341385 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
DFFB-203ENST00000341385 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
DFFB-203ENST00000341385 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
DFFB-203ENST00000341385 SCRIBQ14160 1630 aa35.57■■■■□ 3.29
DFFB-203ENST00000341385 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
DFFB-203ENST00000341385 EIF4G1Q04637 1599 aaKnown RBP34.98■■■■□ 3.19
DFFB-203ENST00000341385 CC2D2AQ9P2K1 1620 aa34.98■■■■□ 3.19
DFFB-203ENST00000341385 CECR2Q9BXF3 1484 aa34.9■■■■□ 3.18
DFFB-203ENST00000341385 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
DFFB-203ENST00000341385 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
DFFB-203ENST00000341385 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
DFFB-203ENST00000341385 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
DFFB-203ENST00000341385 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
DFFB-203ENST00000341385 HMGXB3Q12766 1538 aa33.71■■■□□ 2.99
DFFB-203ENST00000341385 MROH2BQ7Z745 1585 aa33.66■■■□□ 2.98
DFFB-203ENST00000341385 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
DFFB-203ENST00000341385 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
DFFB-203ENST00000341385 ERCC6Q03468 1493 aa33.49■■■□□ 2.95
DFFB-203ENST00000341385 NESP48681 1621 aa33.4■■■□□ 2.94
DFFB-203ENST00000341385 CUX2O14529 1486 aa33.25■■■□□ 2.91
DFFB-203ENST00000341385 WIZO95785 1651 aa33.23■■■□□ 2.91
DFFB-203ENST00000341385 LAMC3Q9Y6N6 1575 aa33.13■■■□□ 2.89
DFFB-203ENST00000341385 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
DFFB-203ENST00000341385 CADPSQ9ULU8 1353 aa33.08■■■□□ 2.89
DFFB-203ENST00000341385 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
DFFB-203ENST00000341385 DNAJC5Q9H3Z4 198 aa33■■■□□ 2.87
DFFB-203ENST00000341385 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
DFFB-203ENST00000341385 KIF21AQ7Z4S6 1674 aa32.84■■■□□ 2.85
DFFB-203ENST00000341385 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.85
DFFB-203ENST00000341385 CFTRP13569 1480 aa32.7■■■□□ 2.83
DFFB-203ENST00000341385 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
DFFB-203ENST00000341385 FANCD2Q9BXW9 1451 aa32.65■■■□□ 2.82
DFFB-203ENST00000341385 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
DFFB-203ENST00000341385 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
DFFB-203ENST00000341385 WDR62O43379 1518 aa32.54■■■□□ 2.8
DFFB-203ENST00000341385 URB2Q14146 1524 aaKnown RBP32.33■■■□□ 2.77
DFFB-203ENST00000341385 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
DFFB-203ENST00000341385 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
DFFB-203ENST00000341385 TOPBP1Q92547 1522 aa32.04■■■□□ 2.72
DFFB-203ENST00000341385 ABCC8Q09428 1581 aa32■■■□□ 2.71
DFFB-203ENST00000341385 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
DFFB-203ENST00000341385 OSCARQ8IYS5 282 aa31.96■■■□□ 2.71
DFFB-203ENST00000341385 ZNF608Q9ULD9 1512 aaPredicted RBP31.9■■■□□ 2.7
DFFB-203ENST00000341385 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
DFFB-203ENST00000341385 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
DFFB-203ENST00000341385 POLA1P09884 1462 aaPredicted RBP31.73■■■□□ 2.67
DFFB-203ENST00000341385 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.678e-7■■■■■ 28.7
DFFB-203ENST00000341385 SOGA1O94964 1423 aa31.69■■■□□ 2.66
DFFB-203ENST00000341385 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
DFFB-203ENST00000341385 TARBP1Q13395 1621 aaKnown RBP31.66■■■□□ 2.66
DFFB-203ENST00000341385 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.65
DFFB-203ENST00000341385 TDRD9Q8NDG6 1382 aaKnown RBP31.6■■■□□ 2.65
DFFB-203ENST00000341385 CUX1P39880 1505 aa31.59■■■□□ 2.65
DFFB-203ENST00000341385 FGD5Q6ZNL6 1462 aa31.59■■■□□ 2.65
DFFB-203ENST00000341385 FBLN2P98095 1184 aa31.56■■■□□ 2.64
DFFB-203ENST00000341385 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
DFFB-203ENST00000341385 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
DFFB-203ENST00000341385 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
DFFB-203ENST00000341385 GRIN2BQ13224 1484 aa31.31■■■□□ 2.6
DFFB-203ENST00000341385 CHD1O14646 1710 aa31.29■■■□□ 2.6
DFFB-203ENST00000341385 RIMBP3CA6NJZ7 1639 aa31.29■■■□□ 2.6
DFFB-203ENST00000341385 RIMBP3BA6NNM3 1639 aa31.29■■■□□ 2.6
DFFB-203ENST00000341385 RIMBP3Q9UFD9 1639 aa31.29■■■□□ 2.6
DFFB-203ENST00000341385 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
DFFB-203ENST00000341385 GAPVD1Q14C86 1478 aa31.26■■■□□ 2.59
DFFB-203ENST00000341385 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
DFFB-203ENST00000341385 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
DFFB-203ENST00000341385 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
DFFB-203ENST00000341385 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
DFFB-203ENST00000341385 SYNJ2O15056 1496 aa31.15■■■□□ 2.58
DFFB-203ENST00000341385 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
DFFB-203ENST00000341385 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
DFFB-203ENST00000341385 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
DFFB-203ENST00000341385 ABCA5Q8WWZ7 1642 aa31.07■■■□□ 2.56
DFFB-203ENST00000341385 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
DFFB-203ENST00000341385 CLASP1Q7Z460 1538 aa31.01■■■□□ 2.55
DFFB-203ENST00000341385 ARAP1Q96P48 1450 aa30.99■■■□□ 2.55
DFFB-203ENST00000341385 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
DFFB-203ENST00000341385 FHAD1B1AJZ9 1412 aa30.88■■■□□ 2.53
DFFB-203ENST00000341385 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
DFFB-203ENST00000341385 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
DFFB-203ENST00000341385 TRHP20396 242 aaPredicted RBP30.79■■■□□ 2.52
DFFB-203ENST00000341385 NUP160Q12769 1436 aa30.77■■■□□ 2.52
DFFB-203ENST00000341385 CEP170Q5SW79 1584 aa30.71■■■□□ 2.51
DFFB-203ENST00000341385 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
DFFB-203ENST00000341385 IGF1RP08069 1367 aa30.65■■■□□ 2.5
DFFB-203ENST00000341385 JPH4Q96JJ6 628 aa30.61■■■□□ 2.49
DFFB-203ENST00000341385 ERCC6L2Q5T890 1561 aa30.6■■■□□ 2.49
DFFB-203ENST00000341385 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
DFFB-203ENST00000341385 SHROOM2Q13796 1616 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms