RNA–Protein interactions for RNA: ENST00000273063.10

SLC4A3-201, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC4A3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-201ENST00000273063 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.31
SLC4A3-201ENST00000273063 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
SLC4A3-201ENST00000273063 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
SLC4A3-201ENST00000273063 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
SLC4A3-201ENST00000273063 EHMT2Q96KQ7 1210 aa26.5■■□□□ 1.83
SLC4A3-201ENST00000273063 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
SLC4A3-201ENST00000273063 PCGF6Q9BYE7 350 aa26.07■■□□□ 1.76
SLC4A3-201ENST00000273063 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
SLC4A3-201ENST00000273063 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
SLC4A3-201ENST00000273063 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
SLC4A3-201ENST00000273063 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
SLC4A3-201ENST00000273063 APLP2Q06481 763 aa25.27■■□□□ 1.64
SLC4A3-201ENST00000273063 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
SLC4A3-201ENST00000273063 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
SLC4A3-201ENST00000273063 HRCP23327 699 aa25.07■■□□□ 1.6
SLC4A3-201ENST00000273063 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
SLC4A3-201ENST00000273063 UBTFP17480 764 aaKnown RBP25.04■■□□□ 1.6
SLC4A3-201ENST00000273063 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
SLC4A3-201ENST00000273063 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
SLC4A3-201ENST00000273063 ABCC9O60706 1549 aa24.69■■□□□ 1.54
SLC4A3-201ENST00000273063 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
SLC4A3-201ENST00000273063 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
SLC4A3-201ENST00000273063 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
SLC4A3-201ENST00000273063 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
SLC4A3-201ENST00000273063 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
SLC4A3-201ENST00000273063 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
SLC4A3-201ENST00000273063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
SLC4A3-201ENST00000273063 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
SLC4A3-201ENST00000273063 ITGAEP38570 1179 aa24.22■■□□□ 1.47
SLC4A3-201ENST00000273063 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.45
SLC4A3-201ENST00000273063 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
SLC4A3-201ENST00000273063 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
SLC4A3-201ENST00000273063 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
SLC4A3-201ENST00000273063 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
SLC4A3-201ENST00000273063 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
SLC4A3-201ENST00000273063 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
SLC4A3-201ENST00000273063 NEFLP07196 543 aa23.67■■□□□ 1.38
SLC4A3-201ENST00000273063 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
SLC4A3-201ENST00000273063 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
SLC4A3-201ENST00000273063 ZNF316A6NFI3 1004 aaPredicted RBP23.48■■□□□ 1.35
SLC4A3-201ENST00000273063 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
SLC4A3-201ENST00000273063 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
SLC4A3-201ENST00000273063 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
SLC4A3-201ENST00000273063 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
SLC4A3-201ENST00000273063 P3H3Q8IVL6 736 aa23.43■■□□□ 1.34
SLC4A3-201ENST00000273063 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
SLC4A3-201ENST00000273063 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
SLC4A3-201ENST00000273063 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
SLC4A3-201ENST00000273063 NACADO15069 1562 aa23.2■■□□□ 1.3
SLC4A3-201ENST00000273063 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
SLC4A3-201ENST00000273063 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
SLC4A3-201ENST00000273063 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
SLC4A3-201ENST00000273063 BCANQ96GW7 911 aa23.1■■□□□ 1.29
SLC4A3-201ENST00000273063 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
SLC4A3-201ENST00000273063 CLIP1P30622 1438 aa23.08■■□□□ 1.29
SLC4A3-201ENST00000273063 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
SLC4A3-201ENST00000273063 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.27
SLC4A3-201ENST00000273063 FBLN2P98095 1184 aa23.01■■□□□ 1.27
SLC4A3-201ENST00000273063 MYT1Q01538 1121 aa23■■□□□ 1.27
SLC4A3-201ENST00000273063 ANP32CO43423 234 aa22.99■■□□□ 1.27
SLC4A3-201ENST00000273063 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
SLC4A3-201ENST00000273063 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
SLC4A3-201ENST00000273063 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
SLC4A3-201ENST00000273063 EEA1Q15075 1411 aa22.95■■□□□ 1.26
SLC4A3-201ENST00000273063 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
SLC4A3-201ENST00000273063 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
SLC4A3-201ENST00000273063 SOGA1O94964 1423 aa22.92■■□□□ 1.26
SLC4A3-201ENST00000273063 MIER1Q8N108 512 aa22.9■■□□□ 1.26
SLC4A3-201ENST00000273063 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
SLC4A3-201ENST00000273063 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
SLC4A3-201ENST00000273063 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
SLC4A3-201ENST00000273063 ZNF777Q9ULD5 760 aaPredicted RBP22.76■■□□□ 1.23
SLC4A3-201ENST00000273063 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
SLC4A3-201ENST00000273063 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
SLC4A3-201ENST00000273063 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
SLC4A3-201ENST00000273063 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
SLC4A3-201ENST00000273063 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
SLC4A3-201ENST00000273063 WIZO95785 1651 aa22.71■■□□□ 1.23
SLC4A3-201ENST00000273063 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
SLC4A3-201ENST00000273063 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
SLC4A3-201ENST00000273063 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
SLC4A3-201ENST00000273063 FKBP8Q14318 412 aa22.6■■□□□ 1.21
SLC4A3-201ENST00000273063 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
SLC4A3-201ENST00000273063 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
SLC4A3-201ENST00000273063 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.2
SLC4A3-201ENST00000273063 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
SLC4A3-201ENST00000273063 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
SLC4A3-201ENST00000273063 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
SLC4A3-201ENST00000273063 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
SLC4A3-201ENST00000273063 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
SLC4A3-201ENST00000273063 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
SLC4A3-201ENST00000273063 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
SLC4A3-201ENST00000273063 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
SLC4A3-201ENST00000273063 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
SLC4A3-201ENST00000273063 CUX2O14529 1486 aa22.36■■□□□ 1.17
SLC4A3-201ENST00000273063 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
SLC4A3-201ENST00000273063 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
SLC4A3-201ENST00000273063 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
SLC4A3-201ENST00000273063 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
SLC4A3-201ENST00000273063 KDM2AQ9Y2K7 1162 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms