RNA–Protein interactions for RNA: ENST00000533862.5

SCYL1-214, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 5 BASIC

Gene SCYL1, Length 2,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-214ENST00000533862 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
SCYL1-214ENST00000533862 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
SCYL1-214ENST00000533862 HRCP23327 699 aa27.79■■■□□ 2.04
SCYL1-214ENST00000533862 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
SCYL1-214ENST00000533862 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
SCYL1-214ENST00000533862 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
SCYL1-214ENST00000533862 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
SCYL1-214ENST00000533862 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.94
SCYL1-214ENST00000533862 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.93
SCYL1-214ENST00000533862 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
SCYL1-214ENST00000533862 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
SCYL1-214ENST00000533862 PELP1Q8IZL8 1130 aaKnown RBP26.65■■□□□ 1.86
SCYL1-214ENST00000533862 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
SCYL1-214ENST00000533862 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
SCYL1-214ENST00000533862 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
SCYL1-214ENST00000533862 ZEB1P37275 1124 aaPredicted RBP26.36■■□□□ 1.81
SCYL1-214ENST00000533862 SCAF1Q9H7N4 1312 aaKnown RBP26.09■■□□□ 1.77
SCYL1-214ENST00000533862 ABCC9O60706 1549 aa25.78■■□□□ 1.72
SCYL1-214ENST00000533862 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
SCYL1-214ENST00000533862 MYT1Q01538 1121 aa25.62■■□□□ 1.69
SCYL1-214ENST00000533862 ACIN1Q9UKV3 1341 aaKnown RBP25.6■■□□□ 1.69
SCYL1-214ENST00000533862 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
SCYL1-214ENST00000533862 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
SCYL1-214ENST00000533862 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
SCYL1-214ENST00000533862 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
SCYL1-214ENST00000533862 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.65
SCYL1-214ENST00000533862 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
SCYL1-214ENST00000533862 GTF3C3Q9Y5Q9 886 aa25.32■■□□□ 1.64
SCYL1-214ENST00000533862 NACADO15069 1562 aa25.32■■□□□ 1.64
SCYL1-214ENST00000533862 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
SCYL1-214ENST00000533862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
SCYL1-214ENST00000533862 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
SCYL1-214ENST00000533862 DIEXFQ68CQ4 756 aaKnown RBP25.27■■□□□ 1.64
SCYL1-214ENST00000533862 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
SCYL1-214ENST00000533862 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
SCYL1-214ENST00000533862 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
SCYL1-214ENST00000533862 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
SCYL1-214ENST00000533862 WIZO95785 1651 aa24.76■■□□□ 1.55
SCYL1-214ENST00000533862 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
SCYL1-214ENST00000533862 YTHDC1Q96MU7 727 aaKnown RBP24.71■■□□□ 1.55
SCYL1-214ENST00000533862 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
SCYL1-214ENST00000533862 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
SCYL1-214ENST00000533862 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
SCYL1-214ENST00000533862 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
SCYL1-214ENST00000533862 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
SCYL1-214ENST00000533862 MIER1Q8N108 512 aa24.58■■□□□ 1.53
SCYL1-214ENST00000533862 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
SCYL1-214ENST00000533862 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
SCYL1-214ENST00000533862 EEA1Q15075 1411 aa24.46■■□□□ 1.51
SCYL1-214ENST00000533862 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCYL1-214ENST00000533862 SOGA1O94964 1423 aa24.41■■□□□ 1.5
SCYL1-214ENST00000533862 CLSPNQ9HAW4 1339 aa24.39■■□□□ 1.49
SCYL1-214ENST00000533862 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
SCYL1-214ENST00000533862 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
SCYL1-214ENST00000533862 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SCYL1-214ENST00000533862 GOLGA3Q08378 1498 aa24.34■■□□□ 1.49
SCYL1-214ENST00000533862 BICRAQ9NZM4 1560 aa24.31■■□□□ 1.48
SCYL1-214ENST00000533862 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
SCYL1-214ENST00000533862 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
SCYL1-214ENST00000533862 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
SCYL1-214ENST00000533862 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
SCYL1-214ENST00000533862 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
SCYL1-214ENST00000533862 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
SCYL1-214ENST00000533862 VPS8Q8N3P4 1428 aa24.09■■□□□ 1.45
SCYL1-214ENST00000533862 KIF21BO75037 1637 aa24.08■■□□□ 1.45
SCYL1-214ENST00000533862 CLIP1P30622 1438 aa24.08■■□□□ 1.45
SCYL1-214ENST00000533862 APLP2Q06481 763 aa24.05■■□□□ 1.44
SCYL1-214ENST00000533862 ANP32EQ9BTT0 268 aa24.02■■□□□ 1.44
SCYL1-214ENST00000533862 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
SCYL1-214ENST00000533862 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
SCYL1-214ENST00000533862 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
SCYL1-214ENST00000533862 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
SCYL1-214ENST00000533862 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
SCYL1-214ENST00000533862 BCL11AQ9H165 835 aa23.76■■□□□ 1.39
SCYL1-214ENST00000533862 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
SCYL1-214ENST00000533862 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
SCYL1-214ENST00000533862 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
SCYL1-214ENST00000533862 CUX2O14529 1486 aa23.64■■□□□ 1.38
SCYL1-214ENST00000533862 RRBP1Q9P2E9 1410 aaKnown RBP23.64■■□□□ 1.37
SCYL1-214ENST00000533862 BCANQ96GW7 911 aa23.59■■□□□ 1.37
SCYL1-214ENST00000533862 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
SCYL1-214ENST00000533862 FKBP8Q14318 412 aa23.58■■□□□ 1.37
SCYL1-214ENST00000533862 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
SCYL1-214ENST00000533862 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
SCYL1-214ENST00000533862 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
SCYL1-214ENST00000533862 NEFLP07196 543 aa23.5■■□□□ 1.35
SCYL1-214ENST00000533862 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
SCYL1-214ENST00000533862 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
SCYL1-214ENST00000533862 RBM19Q9Y4C8 960 aaKnown RBP23.48■■□□□ 1.35
SCYL1-214ENST00000533862 PRXQ9BXM0 1461 aa23.46■■□□□ 1.35
SCYL1-214ENST00000533862 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
SCYL1-214ENST00000533862 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
SCYL1-214ENST00000533862 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
SCYL1-214ENST00000533862 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
SCYL1-214ENST00000533862 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
SCYL1-214ENST00000533862 ITGAEP38570 1179 aa23.35■■□□□ 1.33
SCYL1-214ENST00000533862 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
SCYL1-214ENST00000533862 CCER2I3L3R5 266 aa23.33■■□□□ 1.32
SCYL1-214ENST00000533862 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
SCYL1-214ENST00000533862 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms