RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
AP004609.1-201ENST00000498872 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
AP004609.1-201ENST00000498872 ABCC9O60706 1549 aa37.29■■■■□ 3.56
AP004609.1-201ENST00000498872 RB1CC1Q8TDY2 1594 aa35.53■■■■□ 3.28
AP004609.1-201ENST00000498872 DCAF8L2P0C7V8 631 aa35.33■■■■□ 3.25
AP004609.1-201ENST00000498872 NACADO15069 1562 aa35.31■■■■□ 3.24
AP004609.1-201ENST00000498872 UNC13AQ9UPW8 1703 aa34.85■■■■□ 3.17
AP004609.1-201ENST00000498872 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
AP004609.1-201ENST00000498872 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
AP004609.1-201ENST00000498872 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.15
AP004609.1-201ENST00000498872 ZCCHC6Q5VYS8 1495 aaKnown RBP34.73■■■■□ 3.15
AP004609.1-201ENST00000498872 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
AP004609.1-201ENST00000498872 DCAF1Q9Y4B6 1507 aa34.51■■■■□ 3.11
AP004609.1-201ENST00000498872 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
AP004609.1-201ENST00000498872 SHROOM4Q9ULL8 1493 aa33.93■■■■□ 3.02
AP004609.1-201ENST00000498872 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
AP004609.1-201ENST00000498872 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
AP004609.1-201ENST00000498872 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
AP004609.1-201ENST00000498872 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
AP004609.1-201ENST00000498872 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
AP004609.1-201ENST00000498872 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
AP004609.1-201ENST00000498872 SMARCA2P51531 1590 aa32.47■■■□□ 2.79
AP004609.1-201ENST00000498872 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
AP004609.1-201ENST00000498872 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
AP004609.1-201ENST00000498872 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
AP004609.1-201ENST00000498872 BAZ1BQ9UIG0 1483 aaKnown RBP32.28■■■□□ 2.76
AP004609.1-201ENST00000498872 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
AP004609.1-201ENST00000498872 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
AP004609.1-201ENST00000498872 NESP48681 1621 aa32.12■■■□□ 2.73
AP004609.1-201ENST00000498872 WIZO95785 1651 aa31.97■■■□□ 2.71
AP004609.1-201ENST00000498872 CUX2O14529 1486 aa31.93■■■□□ 2.7
AP004609.1-201ENST00000498872 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
AP004609.1-201ENST00000498872 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
AP004609.1-201ENST00000498872 THOC2Q8NI27 1593 aaKnown RBP31.71■■■□□ 2.67
AP004609.1-201ENST00000498872 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
AP004609.1-201ENST00000498872 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
AP004609.1-201ENST00000498872 PDS5BQ9NTI5 1447 aa31.63■■■□□ 2.65
AP004609.1-201ENST00000498872 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
AP004609.1-201ENST00000498872 TOP2AP11388 1531 aaKnown RBP31.5■■■□□ 2.63
AP004609.1-201ENST00000498872 MRC2Q9UBG0 1479 aa31.37■■■□□ 2.61
AP004609.1-201ENST00000498872 CEP164Q9UPV0 1460 aa31.32■■■□□ 2.6
AP004609.1-201ENST00000498872 CFTRP13569 1480 aa31.31■■■□□ 2.6
AP004609.1-201ENST00000498872 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
AP004609.1-201ENST00000498872 WDR62O43379 1518 aa31.29■■■□□ 2.6
AP004609.1-201ENST00000498872 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
AP004609.1-201ENST00000498872 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
AP004609.1-201ENST00000498872 URB2Q14146 1524 aaKnown RBP31.05■■■□□ 2.56
AP004609.1-201ENST00000498872 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
AP004609.1-201ENST00000498872 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
AP004609.1-201ENST00000498872 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
AP004609.1-201ENST00000498872 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
AP004609.1-201ENST00000498872 ABCC8Q09428 1581 aa30.61■■■□□ 2.49
AP004609.1-201ENST00000498872 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
AP004609.1-201ENST00000498872 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
AP004609.1-201ENST00000498872 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
AP004609.1-201ENST00000498872 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
AP004609.1-201ENST00000498872 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
AP004609.1-201ENST00000498872 POLA1P09884 1462 aaPredicted RBP30.45■■■□□ 2.46
AP004609.1-201ENST00000498872 AQRO60306 1485 aaKnown RBP eCLIP30.4■■■□□ 2.46
AP004609.1-201ENST00000498872 RAD54L2Q9Y4B4 1467 aa30.37■■■□□ 2.45
AP004609.1-201ENST00000498872 CUX1P39880 1505 aa30.33■■■□□ 2.45
AP004609.1-201ENST00000498872 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
AP004609.1-201ENST00000498872 SOGA1O94964 1423 aa30.31■■■□□ 2.44
AP004609.1-201ENST00000498872 CHD1O14646 1710 aa30.27■■■□□ 2.44
AP004609.1-201ENST00000498872 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
AP004609.1-201ENST00000498872 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.42
AP004609.1-201ENST00000498872 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.42
AP004609.1-201ENST00000498872 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.42
AP004609.1-201ENST00000498872 FBLN2P98095 1184 aa30.18■■■□□ 2.42
AP004609.1-201ENST00000498872 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
AP004609.1-201ENST00000498872 ARHGEF11O15085 1522 aa30.1■■■□□ 2.41
AP004609.1-201ENST00000498872 SNAPC4Q5SXM2 1469 aa30.09■■■□□ 2.41
AP004609.1-201ENST00000498872 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
AP004609.1-201ENST00000498872 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
AP004609.1-201ENST00000498872 MAGI1Q96QZ7 1491 aaPredicted RBP29.96■■■□□ 2.39
AP004609.1-201ENST00000498872 GAPVD1Q14C86 1478 aa29.94■■■□□ 2.38
AP004609.1-201ENST00000498872 CHMP7Q8WUX9 453 aaPredicted RBP29.93■■■□□ 2.38
AP004609.1-201ENST00000498872 ABCA10Q8WWZ4 1543 aa29.93■■■□□ 2.38
AP004609.1-201ENST00000498872 ABCA5Q8WWZ7 1642 aa29.91■■■□□ 2.38
AP004609.1-201ENST00000498872 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
AP004609.1-201ENST00000498872 BIVM-ERCC5R4GMW8 1640 aa29.9■■■□□ 2.38
AP004609.1-201ENST00000498872 TOP2BQ02880 1626 aa29.89■■■□□ 2.38
AP004609.1-201ENST00000498872 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.37
AP004609.1-201ENST00000498872 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
AP004609.1-201ENST00000498872 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
AP004609.1-201ENST00000498872 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
AP004609.1-201ENST00000498872 ARAP1Q96P48 1450 aa29.81■■■□□ 2.36
AP004609.1-201ENST00000498872 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
AP004609.1-201ENST00000498872 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
AP004609.1-201ENST00000498872 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
AP004609.1-201ENST00000498872 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
AP004609.1-201ENST00000498872 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
AP004609.1-201ENST00000498872 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
AP004609.1-201ENST00000498872 NUP160Q12769 1436 aa29.49■■■□□ 2.31
AP004609.1-201ENST00000498872 ERCC6L2Q5T890 1561 aa29.48■■■□□ 2.31
AP004609.1-201ENST00000498872 SHROOM2Q13796 1616 aa29.37■■■□□ 2.29
AP004609.1-201ENST00000498872 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
AP004609.1-201ENST00000498872 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
AP004609.1-201ENST00000498872 IGF1RP08069 1367 aa29.24■■■□□ 2.27
AP004609.1-201ENST00000498872 PRG4Q92954 1404 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms