RNA–Protein interactions for RNA: ENST00000335304.6

HTR3E-201, Transcript of 5-hydroxytryptamine receptor 3E, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HTR3E, Length 1,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3E-201ENST00000335304 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
HTR3E-201ENST00000335304 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
HTR3E-201ENST00000335304 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
HTR3E-201ENST00000335304 ABCC9O60706 1549 aa31.26■■■□□ 2.59
HTR3E-201ENST00000335304 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
HTR3E-201ENST00000335304 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
HTR3E-201ENST00000335304 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
HTR3E-201ENST00000335304 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
HTR3E-201ENST00000335304 NACADO15069 1562 aa30.51■■■□□ 2.47
HTR3E-201ENST00000335304 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
HTR3E-201ENST00000335304 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
HTR3E-201ENST00000335304 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
HTR3E-201ENST00000335304 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
HTR3E-201ENST00000335304 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
HTR3E-201ENST00000335304 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
HTR3E-201ENST00000335304 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
HTR3E-201ENST00000335304 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
HTR3E-201ENST00000335304 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
HTR3E-201ENST00000335304 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.23
HTR3E-201ENST00000335304 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
HTR3E-201ENST00000335304 WIZO95785 1651 aa28.83■■■□□ 2.21
HTR3E-201ENST00000335304 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
HTR3E-201ENST00000335304 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
HTR3E-201ENST00000335304 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
HTR3E-201ENST00000335304 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
HTR3E-201ENST00000335304 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
HTR3E-201ENST00000335304 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
HTR3E-201ENST00000335304 CC2D2AQ9P2K1 1620 aa28.23■■■□□ 2.11
HTR3E-201ENST00000335304 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
HTR3E-201ENST00000335304 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
HTR3E-201ENST00000335304 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
HTR3E-201ENST00000335304 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
HTR3E-201ENST00000335304 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
HTR3E-201ENST00000335304 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
HTR3E-201ENST00000335304 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
HTR3E-201ENST00000335304 CFTRP13569 1480 aa27.55■■■□□ 2
HTR3E-201ENST00000335304 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
HTR3E-201ENST00000335304 NESP48681 1621 aa27.42■■□□□ 1.98
HTR3E-201ENST00000335304 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
HTR3E-201ENST00000335304 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
HTR3E-201ENST00000335304 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
HTR3E-201ENST00000335304 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
HTR3E-201ENST00000335304 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
HTR3E-201ENST00000335304 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
HTR3E-201ENST00000335304 CUX1P39880 1505 aa27.16■■□□□ 1.94
HTR3E-201ENST00000335304 TOP2BQ02880 1626 aa27.14■■□□□ 1.93
HTR3E-201ENST00000335304 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
HTR3E-201ENST00000335304 LOC105371045A0A1W2PR82 267 aa27.08■■□□□ 1.93
HTR3E-201ENST00000335304 SOGA1O94964 1423 aa27.06■■□□□ 1.92
HTR3E-201ENST00000335304 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
HTR3E-201ENST00000335304 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
HTR3E-201ENST00000335304 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
HTR3E-201ENST00000335304 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
HTR3E-201ENST00000335304 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
HTR3E-201ENST00000335304 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
HTR3E-201ENST00000335304 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
HTR3E-201ENST00000335304 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.9
HTR3E-201ENST00000335304 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
HTR3E-201ENST00000335304 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
HTR3E-201ENST00000335304 EEA1Q15075 1411 aa26.77■■□□□ 1.88
HTR3E-201ENST00000335304 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
HTR3E-201ENST00000335304 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
HTR3E-201ENST00000335304 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
HTR3E-201ENST00000335304 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
HTR3E-201ENST00000335304 CUX2O14529 1486 aa26.68■■□□□ 1.86
HTR3E-201ENST00000335304 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
HTR3E-201ENST00000335304 WDR62O43379 1518 aa26.59■■□□□ 1.85
HTR3E-201ENST00000335304 ABCA10Q8WWZ4 1543 aa26.59■■□□□ 1.85
HTR3E-201ENST00000335304 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
HTR3E-201ENST00000335304 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
HTR3E-201ENST00000335304 KIF21BO75037 1637 aa26.51■■□□□ 1.83
HTR3E-201ENST00000335304 TARBP1Q13395 1621 aaKnown RBP26.51■■□□□ 1.83
HTR3E-201ENST00000335304 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
HTR3E-201ENST00000335304 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
HTR3E-201ENST00000335304 IGF1RP08069 1367 aa26.49■■□□□ 1.83
HTR3E-201ENST00000335304 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
HTR3E-201ENST00000335304 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
HTR3E-201ENST00000335304 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
HTR3E-201ENST00000335304 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
HTR3E-201ENST00000335304 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
HTR3E-201ENST00000335304 TNIKQ9UKE5 1360 aa26.37■■□□□ 1.81
HTR3E-201ENST00000335304 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
HTR3E-201ENST00000335304 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
HTR3E-201ENST00000335304 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
HTR3E-201ENST00000335304 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.81
HTR3E-201ENST00000335304 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
HTR3E-201ENST00000335304 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
HTR3E-201ENST00000335304 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
HTR3E-201ENST00000335304 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
HTR3E-201ENST00000335304 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
HTR3E-201ENST00000335304 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
HTR3E-201ENST00000335304 CUL7Q14999 1698 aa26.21■■□□□ 1.79
HTR3E-201ENST00000335304 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
HTR3E-201ENST00000335304 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
HTR3E-201ENST00000335304 HRCP23327 699 aa26.14■■□□□ 1.78
HTR3E-201ENST00000335304 CLIP1P30622 1438 aa26.09■■□□□ 1.77
HTR3E-201ENST00000335304 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
HTR3E-201ENST00000335304 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
HTR3E-201ENST00000335304 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
HTR3E-201ENST00000335304 CTTNBP2Q8WZ74 1663 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms