Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TCRAP04437 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.9□□□□□ -0.34
TCRAP04437 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 HBZP1-201ENST00000354915 429 ntBASIC12.9□□□□□ -0.34
TCRAP04437 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.9□□□□□ -0.34
TCRAP04437 GUSBP12-201ENST00000513727 720 ntBASIC12.9□□□□□ -0.34
TCRAP04437 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TCRAP04437 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TCRAP04437 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.9□□□□□ -0.34
TCRAP04437 AC011558.1-201ENST00000623459 338 ntBASIC12.9□□□□□ -0.34
TCRAP04437 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TCRAP04437 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRAP04437 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TCRAP04437 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRAP04437 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TCRAP04437 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 LINC00895-201ENST00000629028 1637 ntBASIC12.89□□□□□ -0.35
TCRAP04437 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TCRAP04437 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRAP04437 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 RNF126P1-202ENST00000569893 925 ntBASIC12.89□□□□□ -0.35
TCRAP04437 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TCRAP04437 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TCRAP04437 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRAP04437 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms