RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 NISCHQ9Y2I1 1504 aa50.98■■■■■ 5.75
FMR1-202ENST00000334557 ABCC9O60706 1549 aa46.46■■■■■ 5.03
FMR1-202ENST00000334557 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
FMR1-202ENST00000334557 DNAJC5BQ9UF47 199 aa44.14■■■■■ 4.66
FMR1-202ENST00000334557 RB1CC1Q8TDY2 1594 aa43.87■■■■■ 4.61
FMR1-202ENST00000334557 NACADO15069 1562 aa43.46■■■■■ 4.55
FMR1-202ENST00000334557 DCAF8L2P0C7V8 631 aa43.38■■■■■ 4.53
FMR1-202ENST00000334557 PABPN1Q86U42 306 aaKnown RBP eCLIP43.27■■■■■ 4.52
FMR1-202ENST00000334557 UNC13AQ9UPW8 1703 aa42.94■■■■■ 4.46
FMR1-202ENST00000334557 BICRAQ9NZM4 1560 aa42.73■■■■■ 4.43
FMR1-202ENST00000334557 MYO15BQ96JP2 1530 aa42.68■■■■■ 4.42
FMR1-202ENST00000334557 ZCCHC6Q5VYS8 1495 aaKnown RBP42.13■■■■■ 4.34
FMR1-202ENST00000334557 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
FMR1-202ENST00000334557 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
FMR1-202ENST00000334557 CC2D2AQ9P2K1 1620 aa41.88■■■■■ 4.3
FMR1-202ENST00000334557 SCRIBQ14160 1630 aa41.85■■■■■ 4.29
FMR1-202ENST00000334557 CECR2Q9BXF3 1484 aa41.84■■■■■ 4.29
FMR1-202ENST00000334557 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
FMR1-202ENST00000334557 DNAJC5Q9H3Z4 198 aa40.72■■■■■ 4.11
FMR1-202ENST00000334557 NCAPD3P42695 1498 aa40.2■■■■■ 4.03
FMR1-202ENST00000334557 CUX2O14529 1486 aa40.08■■■■■ 4.01
FMR1-202ENST00000334557 ERCC6Q03468 1493 aa40.05■■■■■ 4
FMR1-202ENST00000334557 ATAD2BQ9ULI0 1458 aa40.04■■■■■ 4
FMR1-202ENST00000334557 SMARCA4P51532 1647 aa39.84■■■■□ 3.97
FMR1-202ENST00000334557 NESP48681 1621 aa39.81■■■■□ 3.96
FMR1-202ENST00000334557 SMARCA2P51531 1590 aa39.8■■■■□ 3.96
FMR1-202ENST00000334557 HMGXB3Q12766 1538 aa39.79■■■■□ 3.96
FMR1-202ENST00000334557 BAZ1BQ9UIG0 1483 aaKnown RBP39.58■■■■□ 3.93
FMR1-202ENST00000334557 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
FMR1-202ENST00000334557 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
FMR1-202ENST00000334557 THOC2Q8NI27 1593 aaKnown RBP39.38■■■■□ 3.9
FMR1-202ENST00000334557 MROH2BQ7Z745 1585 aa39.34■■■■□ 3.89
FMR1-202ENST00000334557 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
FMR1-202ENST00000334557 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
FMR1-202ENST00000334557 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
FMR1-202ENST00000334557 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
FMR1-202ENST00000334557 WIZO95785 1651 aa38.83■■■■□ 3.81
FMR1-202ENST00000334557 MRC2Q9UBG0 1479 aa38.82■■■■□ 3.81
FMR1-202ENST00000334557 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
FMR1-202ENST00000334557 WDR62O43379 1518 aa38.73■■■■□ 3.79
FMR1-202ENST00000334557 CEP164Q9UPV0 1460 aa38.57■■■■□ 3.76
FMR1-202ENST00000334557 FANCD2Q9BXW9 1451 aa38.53■■■■□ 3.76
FMR1-202ENST00000334557 CFTRP13569 1480 aa38.42■■■■□ 3.74
FMR1-202ENST00000334557 RSF1Q96T23 1441 aaPredicted RBP38.37■■■■□ 3.73
FMR1-202ENST00000334557 OSCARQ8IYS5 282 aa38.29■■■■□ 3.72
FMR1-202ENST00000334557 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
FMR1-202ENST00000334557 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
FMR1-202ENST00000334557 ZNF608Q9ULD9 1512 aaPredicted RBP37.92■■■■□ 3.66
FMR1-202ENST00000334557 CCDC88BA6NC98 1476 aa37.9■■■■□ 3.66
FMR1-202ENST00000334557 PRDM2Q13029 1718 aa37.86■■■■□ 3.65
FMR1-202ENST00000334557 IFT140Q96RY7 1462 aa37.81■■■■□ 3.64
FMR1-202ENST00000334557 RIMBP3CA6NJZ7 1639 aa37.8■■■■□ 3.64
FMR1-202ENST00000334557 RIMBP3BA6NNM3 1639 aa37.8■■■■□ 3.64
FMR1-202ENST00000334557 RIMBP3Q9UFD9 1639 aa37.8■■■■□ 3.64
FMR1-202ENST00000334557 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
FMR1-202ENST00000334557 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
FMR1-202ENST00000334557 EIF4G3O43432 1585 aaKnown RBP37.57■■■■□ 3.6
FMR1-202ENST00000334557 ABCC8Q09428 1581 aa37.54■■■■□ 3.6
FMR1-202ENST00000334557 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.6
FMR1-202ENST00000334557 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.6
FMR1-202ENST00000334557 CYB5RLQ6IPT4 315 aa37.49■■■■□ 3.59
FMR1-202ENST00000334557 TARBP1Q13395 1621 aaKnown RBP37.44■■■■□ 3.58
FMR1-202ENST00000334557 CHD1O14646 1710 aa37.39■■■■□ 3.58
FMR1-202ENST00000334557 FBLN2P98095 1184 aa37.36■■■■□ 3.57
FMR1-202ENST00000334557 POLA1P09884 1462 aaPredicted RBP37.34■■■■□ 3.57
FMR1-202ENST00000334557 RAD54L2Q9Y4B4 1467 aa37.29■■■■□ 3.56
FMR1-202ENST00000334557 ARAP1Q96P48 1450 aa37.27■■■■□ 3.56
FMR1-202ENST00000334557 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
FMR1-202ENST00000334557 TRHP20396 242 aaPredicted RBP37.19■■■■□ 3.54
FMR1-202ENST00000334557 SOGA1O94964 1423 aa37.19■■■■□ 3.54
FMR1-202ENST00000334557 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
FMR1-202ENST00000334557 FGD5Q6ZNL6 1462 aa37.05■■■■□ 3.52
FMR1-202ENST00000334557 CUX1P39880 1505 aa36.97■■■■□ 3.51
FMR1-202ENST00000334557 CHMP7Q8WUX9 453 aaPredicted RBP36.97■■■■□ 3.51
FMR1-202ENST00000334557 CLASP1Q7Z460 1538 aa36.96■■■■□ 3.51
FMR1-202ENST00000334557 WDR97A6NE52 1622 aa36.87■■■■□ 3.49
FMR1-202ENST00000334557 MAGI1Q96QZ7 1491 aaPredicted RBP36.87■■■■□ 3.49
FMR1-202ENST00000334557 GRIN2BQ13224 1484 aa36.85■■■■□ 3.49
FMR1-202ENST00000334557 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
FMR1-202ENST00000334557 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
FMR1-202ENST00000334557 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
FMR1-202ENST00000334557 PBRM1Q86U86 1689 aa36.64■■■■□ 3.46
FMR1-202ENST00000334557 ABCA10Q8WWZ4 1543 aa36.57■■■■□ 3.44
FMR1-202ENST00000334557 ABCA5Q8WWZ7 1642 aa36.54■■■■□ 3.44
FMR1-202ENST00000334557 ERCC6L2Q5T890 1561 aa36.46■■■■□ 3.43
FMR1-202ENST00000334557 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
FMR1-202ENST00000334557 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
FMR1-202ENST00000334557 AEBP2Q6ZN18 517 aaPredicted RBP36.37■■■■□ 3.41
FMR1-202ENST00000334557 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
FMR1-202ENST00000334557 CEP170Q5SW79 1584 aa36.32■■■■□ 3.4
FMR1-202ENST00000334557 NUP160Q12769 1436 aa36.3■■■■□ 3.4
FMR1-202ENST00000334557 ADAMTS12P58397 1594 aa36.29■■■■□ 3.4
FMR1-202ENST00000334557 FHAD1B1AJZ9 1412 aa36.19■■■■□ 3.38
FMR1-202ENST00000334557 TOP2BQ02880 1626 aa36.18■■■■□ 3.38
FMR1-202ENST00000334557 BIVM-ERCC5R4GMW8 1640 aa36.17■■■■□ 3.38
FMR1-202ENST00000334557 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
FMR1-202ENST00000334557 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
FMR1-202ENST00000334557 PRG4Q92954 1404 aaPredicted RBP36.02■■■■□ 3.36
FMR1-202ENST00000334557 JPH4Q96JJ6 628 aa36■■■■□ 3.35
FMR1-202ENST00000334557 KIF13AQ9H1H9 1805 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms