RNA–Protein interactions for RNA: ENST00000616923.4

GCLC-213, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene GCLC, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-213ENST00000616923 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
GCLC-213ENST00000616923 HRCP23327 699 aa27■■□□□ 1.91
GCLC-213ENST00000616923 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
GCLC-213ENST00000616923 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.9
GCLC-213ENST00000616923 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
GCLC-213ENST00000616923 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
GCLC-213ENST00000616923 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
GCLC-213ENST00000616923 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
GCLC-213ENST00000616923 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
GCLC-213ENST00000616923 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.75
GCLC-213ENST00000616923 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
GCLC-213ENST00000616923 SCAF1Q9H7N4 1312 aaKnown RBP25.77■■□□□ 1.72
GCLC-213ENST00000616923 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
GCLC-213ENST00000616923 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
GCLC-213ENST00000616923 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
GCLC-213ENST00000616923 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
GCLC-213ENST00000616923 MYT1Q01538 1121 aa25.12■■□□□ 1.61
GCLC-213ENST00000616923 GTF3C3Q9Y5Q9 886 aa25.1■■□□□ 1.61
GCLC-213ENST00000616923 NEUROD1Q13562 356 aa25.1■■□□□ 1.61
GCLC-213ENST00000616923 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
GCLC-213ENST00000616923 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
GCLC-213ENST00000616923 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.57
GCLC-213ENST00000616923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.56
GCLC-213ENST00000616923 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
GCLC-213ENST00000616923 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
GCLC-213ENST00000616923 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
GCLC-213ENST00000616923 TTBK1Q5TCY1 1321 aaPredicted RBP24.72■■□□□ 1.55
GCLC-213ENST00000616923 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
GCLC-213ENST00000616923 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
GCLC-213ENST00000616923 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
GCLC-213ENST00000616923 ABCC9O60706 1549 aa24.06■■□□□ 1.44
GCLC-213ENST00000616923 MIER1Q8N108 512 aa24.05■■□□□ 1.44
GCLC-213ENST00000616923 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
GCLC-213ENST00000616923 BCL11AQ9H165 835 aa23.86■■□□□ 1.41
GCLC-213ENST00000616923 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
GCLC-213ENST00000616923 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
GCLC-213ENST00000616923 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
GCLC-213ENST00000616923 BCANQ96GW7 911 aa23.69■■□□□ 1.38
GCLC-213ENST00000616923 ANP32EQ9BTT0 268 aa23.69■■□□□ 1.38
GCLC-213ENST00000616923 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
GCLC-213ENST00000616923 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
GCLC-213ENST00000616923 TSHZ2Q9NRE2 1034 aa23.56■■□□□ 1.36
GCLC-213ENST00000616923 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
GCLC-213ENST00000616923 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
GCLC-213ENST00000616923 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
GCLC-213ENST00000616923 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
GCLC-213ENST00000616923 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
GCLC-213ENST00000616923 FKBP8Q14318 412 aa23.26■■□□□ 1.31
GCLC-213ENST00000616923 APLP2Q06481 763 aa23.23■■□□□ 1.31
GCLC-213ENST00000616923 ITGAEP38570 1179 aa23.22■■□□□ 1.31
GCLC-213ENST00000616923 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
GCLC-213ENST00000616923 KCNH8Q96L42 1107 aa23.17■■□□□ 1.3
GCLC-213ENST00000616923 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.3
GCLC-213ENST00000616923 CLSPNQ9HAW4 1339 aa23.14■■□□□ 1.29
GCLC-213ENST00000616923 NEFLP07196 543 aa23.11■■□□□ 1.29
GCLC-213ENST00000616923 RBM19Q9Y4C8 960 aaKnown RBP23.08■■□□□ 1.29
GCLC-213ENST00000616923 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
GCLC-213ENST00000616923 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
GCLC-213ENST00000616923 NACADO15069 1562 aa22.94■■□□□ 1.26
GCLC-213ENST00000616923 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
GCLC-213ENST00000616923 SOGA1O94964 1423 aa22.91■■□□□ 1.26
GCLC-213ENST00000616923 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
GCLC-213ENST00000616923 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
GCLC-213ENST00000616923 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
GCLC-213ENST00000616923 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
GCLC-213ENST00000616923 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
GCLC-213ENST00000616923 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
GCLC-213ENST00000616923 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
GCLC-213ENST00000616923 WIZO95785 1651 aa22.8■■□□□ 1.24
GCLC-213ENST00000616923 MSH5O43196 834 aa22.79■■□□□ 1.24
GCLC-213ENST00000616923 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
GCLC-213ENST00000616923 ATP1B4Q9UN42 357 aaPredicted RBP22.71■■□□□ 1.23
GCLC-213ENST00000616923 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
GCLC-213ENST00000616923 NBR1Q14596 966 aa22.67■■□□□ 1.22
GCLC-213ENST00000616923 DEKP35659 375 aaKnown RBP22.62■■□□□ 1.21
GCLC-213ENST00000616923 DHX57Q6P158 1386 aaKnown RBP22.61■■□□□ 1.21
GCLC-213ENST00000616923 CLIP1P30622 1438 aa22.6■■□□□ 1.21
GCLC-213ENST00000616923 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
GCLC-213ENST00000616923 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
GCLC-213ENST00000616923 ANP32CO43423 234 aa22.54■■□□□ 1.2
GCLC-213ENST00000616923 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
GCLC-213ENST00000616923 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.191e-6■■■■□ 21
GCLC-213ENST00000616923 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
GCLC-213ENST00000616923 KANK4Q5T7N3 995 aaPredicted RBP22.45■■□□□ 1.19
GCLC-213ENST00000616923 RTN4Q9NQC3 1192 aaKnown RBP22.44■■□□□ 1.18
GCLC-213ENST00000616923 CCDC136Q96JN2 1154 aa22.41■■□□□ 1.18
GCLC-213ENST00000616923 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
GCLC-213ENST00000616923 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
GCLC-213ENST00000616923 EEA1Q15075 1411 aa22.34■■□□□ 1.17
GCLC-213ENST00000616923 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
GCLC-213ENST00000616923 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
GCLC-213ENST00000616923 RTL5Q5HYW3 569 aaPredicted RBP22.29■■□□□ 1.16
GCLC-213ENST00000616923 SALL2Q9Y467 1007 aaPredicted RBP22.29■■□□□ 1.16
GCLC-213ENST00000616923 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
GCLC-213ENST00000616923 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
GCLC-213ENST00000616923 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
GCLC-213ENST00000616923 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
GCLC-213ENST00000616923 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
GCLC-213ENST00000616923 MYT1LQ9UL68 1186 aa22.23■■□□□ 1.15
GCLC-213ENST00000616923 NOP58Q9Y2X3 529 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms