RNA–Protein interactions for RNA: ENST00000564973.1

ATP6V0C-202, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 2 BASIC

Gene ATP6V0C, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-202ENST00000564973 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
ATP6V0C-202ENST00000564973 CCDC180Q9P1Z9 1646 aa37.18■■■■□ 3.54
ATP6V0C-202ENST00000564973 ABCC9O60706 1549 aa35.93■■■■□ 3.34
ATP6V0C-202ENST00000564973 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
ATP6V0C-202ENST00000564973 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
ATP6V0C-202ENST00000564973 NACADO15069 1562 aa34.93■■■■□ 3.18
ATP6V0C-202ENST00000564973 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
ATP6V0C-202ENST00000564973 MYO15BQ96JP2 1530 aa34.86■■■■□ 3.17
ATP6V0C-202ENST00000564973 DCAF1Q9Y4B6 1507 aa34.8■■■■□ 3.16
ATP6V0C-202ENST00000564973 UNC13AQ9UPW8 1703 aa33.86■■■■□ 3.01
ATP6V0C-202ENST00000564973 SCRIBQ14160 1630 aa33.81■■■■□ 3
ATP6V0C-202ENST00000564973 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
ATP6V0C-202ENST00000564973 BICRAQ9NZM4 1560 aa33.59■■■□□ 2.97
ATP6V0C-202ENST00000564973 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
ATP6V0C-202ENST00000564973 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
ATP6V0C-202ENST00000564973 DNAJC5BQ9UF47 199 aa32.58■■■□□ 2.81
ATP6V0C-202ENST00000564973 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
ATP6V0C-202ENST00000564973 CC2D2AQ9P2K1 1620 aa32.54■■■□□ 2.8
ATP6V0C-202ENST00000564973 CECR2Q9BXF3 1484 aa32.5■■■□□ 2.79
ATP6V0C-202ENST00000564973 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
ATP6V0C-202ENST00000564973 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
ATP6V0C-202ENST00000564973 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
ATP6V0C-202ENST00000564973 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
ATP6V0C-202ENST00000564973 ATAD2BQ9ULI0 1458 aa32.19■■■□□ 2.74
ATP6V0C-202ENST00000564973 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
ATP6V0C-202ENST00000564973 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
ATP6V0C-202ENST00000564973 HMGXB3Q12766 1538 aa32.04■■■□□ 2.72
ATP6V0C-202ENST00000564973 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
ATP6V0C-202ENST00000564973 WIZO95785 1651 aa31.89■■■□□ 2.7
ATP6V0C-202ENST00000564973 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
ATP6V0C-202ENST00000564973 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
ATP6V0C-202ENST00000564973 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
ATP6V0C-202ENST00000564973 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
ATP6V0C-202ENST00000564973 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
ATP6V0C-202ENST00000564973 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
ATP6V0C-202ENST00000564973 CFTRP13569 1480 aa31.13■■■□□ 2.57
ATP6V0C-202ENST00000564973 NESP48681 1621 aa31.13■■■□□ 2.57
ATP6V0C-202ENST00000564973 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
ATP6V0C-202ENST00000564973 PRDM2Q13029 1718 aa30.9■■■□□ 2.54
ATP6V0C-202ENST00000564973 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
ATP6V0C-202ENST00000564973 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
ATP6V0C-202ENST00000564973 KIF21AQ7Z4S6 1674 aa30.8■■■□□ 2.52
ATP6V0C-202ENST00000564973 MRC2Q9UBG0 1479 aa30.7■■■□□ 2.51
ATP6V0C-202ENST00000564973 CUX2O14529 1486 aa30.66■■■□□ 2.5
ATP6V0C-202ENST00000564973 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
ATP6V0C-202ENST00000564973 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
ATP6V0C-202ENST00000564973 WDR62O43379 1518 aa30.55■■■□□ 2.48
ATP6V0C-202ENST00000564973 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
ATP6V0C-202ENST00000564973 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
ATP6V0C-202ENST00000564973 TOPBP1Q92547 1522 aa30.39■■■□□ 2.46
ATP6V0C-202ENST00000564973 WRNQ14191 1432 aaPredicted RBP eCLIP30.28■■■□□ 2.44
ATP6V0C-202ENST00000564973 CUX1P39880 1505 aa30.22■■■□□ 2.43
ATP6V0C-202ENST00000564973 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
ATP6V0C-202ENST00000564973 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
ATP6V0C-202ENST00000564973 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
ATP6V0C-202ENST00000564973 SOGA1O94964 1423 aa30.13■■■□□ 2.41
ATP6V0C-202ENST00000564973 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
ATP6V0C-202ENST00000564973 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
ATP6V0C-202ENST00000564973 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
ATP6V0C-202ENST00000564973 TARBP1Q13395 1621 aaKnown RBP29.98■■■□□ 2.39
ATP6V0C-202ENST00000564973 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
ATP6V0C-202ENST00000564973 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.39
ATP6V0C-202ENST00000564973 TRIM41Q8WV44 630 aa29.91■■■□□ 2.38
ATP6V0C-202ENST00000564973 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
ATP6V0C-202ENST00000564973 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
ATP6V0C-202ENST00000564973 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
ATP6V0C-202ENST00000564973 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.362e-7■■□□□ 12.9
ATP6V0C-202ENST00000564973 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
ATP6V0C-202ENST00000564973 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
ATP6V0C-202ENST00000564973 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
ATP6V0C-202ENST00000564973 KIF27Q86VH2 1401 aa29.7■■■□□ 2.34
ATP6V0C-202ENST00000564973 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
ATP6V0C-202ENST00000564973 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
ATP6V0C-202ENST00000564973 CHIC1Q5VXU3 224 aa29.62■■■□□ 2.33
ATP6V0C-202ENST00000564973 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
ATP6V0C-202ENST00000564973 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
ATP6V0C-202ENST00000564973 CHMP7Q8WUX9 453 aaPredicted RBP29.55■■■□□ 2.32
ATP6V0C-202ENST00000564973 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
ATP6V0C-202ENST00000564973 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
ATP6V0C-202ENST00000564973 FBLN2P98095 1184 aa29.52■■■□□ 2.32
ATP6V0C-202ENST00000564973 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
ATP6V0C-202ENST00000564973 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
ATP6V0C-202ENST00000564973 IGF1RP08069 1367 aa29.44■■■□□ 2.3
ATP6V0C-202ENST00000564973 EEA1Q15075 1411 aa29.43■■■□□ 2.3
ATP6V0C-202ENST00000564973 CUL7Q14999 1698 aa29.39■■■□□ 2.3
ATP6V0C-202ENST00000564973 ADAMTS12P58397 1594 aa29.36■■■□□ 2.29
ATP6V0C-202ENST00000564973 CHD1O14646 1710 aa29.35■■■□□ 2.29
ATP6V0C-202ENST00000564973 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
ATP6V0C-202ENST00000564973 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
ATP6V0C-202ENST00000564973 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
ATP6V0C-202ENST00000564973 CSRNP3Q8WYN3 585 aa29.29■■■□□ 2.28
ATP6V0C-202ENST00000564973 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
ATP6V0C-202ENST00000564973 RAPGEF2Q9Y4G8 1499 aa29.19■■■□□ 2.26
ATP6V0C-202ENST00000564973 NUP160Q12769 1436 aa29.14■■■□□ 2.26
ATP6V0C-202ENST00000564973 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
ATP6V0C-202ENST00000564973 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
ATP6V0C-202ENST00000564973 CLASP1Q7Z460 1538 aa29.05■■■□□ 2.24
ATP6V0C-202ENST00000564973 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
ATP6V0C-202ENST00000564973 KIAA0586Q9BVV6 1533 aa29.02■■■□□ 2.24
ATP6V0C-202ENST00000564973 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms