RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 NISCHQ9Y2I1 1504 aa41.29■■■■■ 4.2
TRIM60-203ENST00000508504 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
TRIM60-203ENST00000508504 ABCC9O60706 1549 aa35.1■■■■□ 3.21
TRIM60-203ENST00000508504 ZCCHC6Q5VYS8 1495 aaKnown RBP34.53■■■■□ 3.12
TRIM60-203ENST00000508504 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
TRIM60-203ENST00000508504 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
TRIM60-203ENST00000508504 NACADO15069 1562 aa34■■■■□ 3.03
TRIM60-203ENST00000508504 MYO15BQ96JP2 1530 aa33.97■■■■□ 3.03
TRIM60-203ENST00000508504 RB1CC1Q8TDY2 1594 aa33.9■■■■□ 3.02
TRIM60-203ENST00000508504 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
TRIM60-203ENST00000508504 UNC13AQ9UPW8 1703 aa33.26■■■□□ 2.91
TRIM60-203ENST00000508504 SHROOM4Q9ULL8 1493 aa33.2■■■□□ 2.9
TRIM60-203ENST00000508504 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.87
TRIM60-203ENST00000508504 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
TRIM60-203ENST00000508504 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.74
TRIM60-203ENST00000508504 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.71
TRIM60-203ENST00000508504 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
TRIM60-203ENST00000508504 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
TRIM60-203ENST00000508504 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
TRIM60-203ENST00000508504 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
TRIM60-203ENST00000508504 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
TRIM60-203ENST00000508504 DNAJC5BQ9UF47 199 aa31.73■■■□□ 2.67
TRIM60-203ENST00000508504 WIZO95785 1651 aa31.6■■■□□ 2.65
TRIM60-203ENST00000508504 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
TRIM60-203ENST00000508504 PEG3Q9GZU2 1588 aa31.53■■■□□ 2.64
TRIM60-203ENST00000508504 SUPT5HO00267 1087 aaKnown RBP31.53■■■□□ 2.64
TRIM60-203ENST00000508504 SMARCA2P51531 1590 aa31.49■■■□□ 2.63
TRIM60-203ENST00000508504 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
TRIM60-203ENST00000508504 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
TRIM60-203ENST00000508504 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
TRIM60-203ENST00000508504 TOP2AP11388 1531 aaKnown RBP31.21■■■□□ 2.59
TRIM60-203ENST00000508504 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
TRIM60-203ENST00000508504 NESP48681 1621 aa30.6■■■□□ 2.49
TRIM60-203ENST00000508504 CADPSQ9ULU8 1353 aa30.56■■■□□ 2.48
TRIM60-203ENST00000508504 CFTRP13569 1480 aa30.52■■■□□ 2.48
TRIM60-203ENST00000508504 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.47
TRIM60-203ENST00000508504 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
TRIM60-203ENST00000508504 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
TRIM60-203ENST00000508504 FANCD2Q9BXW9 1451 aa30.22■■■□□ 2.43
TRIM60-203ENST00000508504 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
TRIM60-203ENST00000508504 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
TRIM60-203ENST00000508504 CEP164Q9UPV0 1460 aa30.09■■■□□ 2.41
TRIM60-203ENST00000508504 ABCC8Q09428 1581 aa30.04■■■□□ 2.4
TRIM60-203ENST00000508504 URB2Q14146 1524 aaKnown RBP29.92■■■□□ 2.38
TRIM60-203ENST00000508504 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
TRIM60-203ENST00000508504 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
TRIM60-203ENST00000508504 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
TRIM60-203ENST00000508504 CUX1P39880 1505 aa29.87■■■□□ 2.37
TRIM60-203ENST00000508504 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
TRIM60-203ENST00000508504 TOPBP1Q92547 1522 aa29.82■■■□□ 2.36
TRIM60-203ENST00000508504 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
TRIM60-203ENST00000508504 WDR62O43379 1518 aa29.79■■■□□ 2.36
TRIM60-203ENST00000508504 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
TRIM60-203ENST00000508504 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
TRIM60-203ENST00000508504 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
TRIM60-203ENST00000508504 TRIM41Q8WV44 630 aa29.66■■■□□ 2.34
TRIM60-203ENST00000508504 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
TRIM60-203ENST00000508504 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
TRIM60-203ENST00000508504 CUX2O14529 1486 aa29.58■■■□□ 2.33
TRIM60-203ENST00000508504 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
TRIM60-203ENST00000508504 SOGA1O94964 1423 aa29.49■■■□□ 2.31
TRIM60-203ENST00000508504 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.31
TRIM60-203ENST00000508504 IFT140Q96RY7 1462 aa29.41■■■□□ 2.3
TRIM60-203ENST00000508504 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
TRIM60-203ENST00000508504 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
TRIM60-203ENST00000508504 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
TRIM60-203ENST00000508504 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
TRIM60-203ENST00000508504 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
TRIM60-203ENST00000508504 AQRO60306 1485 aaKnown RBP eCLIP29.27■■■□□ 2.28
TRIM60-203ENST00000508504 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.27
TRIM60-203ENST00000508504 ABCA5Q8WWZ7 1642 aa29.19■■■□□ 2.26
TRIM60-203ENST00000508504 KIF27Q86VH2 1401 aa29.17■■■□□ 2.26
TRIM60-203ENST00000508504 GAPVD1Q14C86 1478 aa29.16■■■□□ 2.26
TRIM60-203ENST00000508504 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
TRIM60-203ENST00000508504 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
TRIM60-203ENST00000508504 IGF1RP08069 1367 aa29.04■■■□□ 2.24
TRIM60-203ENST00000508504 GRIN2BQ13224 1484 aa29.03■■■□□ 2.24
TRIM60-203ENST00000508504 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
TRIM60-203ENST00000508504 EEA1Q15075 1411 aa28.97■■■□□ 2.23
TRIM60-203ENST00000508504 SNAPC4Q5SXM2 1469 aa28.96■■■□□ 2.23
TRIM60-203ENST00000508504 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
TRIM60-203ENST00000508504 MAGI1Q96QZ7 1491 aaPredicted RBP28.87■■■□□ 2.21
TRIM60-203ENST00000508504 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
TRIM60-203ENST00000508504 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
TRIM60-203ENST00000508504 CUL7Q14999 1698 aa28.83■■■□□ 2.21
TRIM60-203ENST00000508504 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
TRIM60-203ENST00000508504 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
TRIM60-203ENST00000508504 EHMT2Q96KQ7 1210 aa28.8■■■□□ 2.2
TRIM60-203ENST00000508504 FBLN2P98095 1184 aa28.79■■■□□ 2.2
TRIM60-203ENST00000508504 SYNJ2O15056 1496 aa28.77■■■□□ 2.2
TRIM60-203ENST00000508504 CHMP7Q8WUX9 453 aaPredicted RBP28.74■■■□□ 2.19
TRIM60-203ENST00000508504 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
TRIM60-203ENST00000508504 CHD1O14646 1710 aa28.72■■■□□ 2.19
TRIM60-203ENST00000508504 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
TRIM60-203ENST00000508504 KIF21BO75037 1637 aa28.69■■■□□ 2.18
TRIM60-203ENST00000508504 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
TRIM60-203ENST00000508504 GOLGA3Q08378 1498 aa28.58■■■□□ 2.17
TRIM60-203ENST00000508504 CEP170Q5SW79 1584 aa28.56■■■□□ 2.16
TRIM60-203ENST00000508504 NUP160Q12769 1436 aa28.53■■■□□ 2.16
TRIM60-203ENST00000508504 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms