RNA–Protein interactions for RNA: ENST00000409900.7

CHN1-205, Transcript of chimerin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHN1, Length 2,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHN1-205ENST00000409900 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
CHN1-205ENST00000409900 CCDC180Q9P1Z9 1646 aa31.03■■■□□ 2.56
CHN1-205ENST00000409900 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
CHN1-205ENST00000409900 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
CHN1-205ENST00000409900 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
CHN1-205ENST00000409900 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
CHN1-205ENST00000409900 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
CHN1-205ENST00000409900 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
CHN1-205ENST00000409900 ABCC9O60706 1549 aa29.02■■■□□ 2.24
CHN1-205ENST00000409900 NACADO15069 1562 aa28.8■■■□□ 2.2
CHN1-205ENST00000409900 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
CHN1-205ENST00000409900 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
CHN1-205ENST00000409900 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
CHN1-205ENST00000409900 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
CHN1-205ENST00000409900 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
CHN1-205ENST00000409900 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
CHN1-205ENST00000409900 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
CHN1-205ENST00000409900 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
CHN1-205ENST00000409900 WIZO95785 1651 aa27.63■■■□□ 2.01
CHN1-205ENST00000409900 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
CHN1-205ENST00000409900 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
CHN1-205ENST00000409900 SMARCA4P51532 1647 aa27.52■■■□□ 2
CHN1-205ENST00000409900 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
CHN1-205ENST00000409900 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
CHN1-205ENST00000409900 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
CHN1-205ENST00000409900 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
CHN1-205ENST00000409900 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
CHN1-205ENST00000409900 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
CHN1-205ENST00000409900 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
CHN1-205ENST00000409900 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
CHN1-205ENST00000409900 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
CHN1-205ENST00000409900 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
CHN1-205ENST00000409900 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
CHN1-205ENST00000409900 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
CHN1-205ENST00000409900 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
CHN1-205ENST00000409900 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
CHN1-205ENST00000409900 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
CHN1-205ENST00000409900 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
CHN1-205ENST00000409900 HRCP23327 699 aa26.41■■□□□ 1.82
CHN1-205ENST00000409900 SOGA1O94964 1423 aa26.37■■□□□ 1.81
CHN1-205ENST00000409900 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
CHN1-205ENST00000409900 EEA1Q15075 1411 aa26.32■■□□□ 1.8
CHN1-205ENST00000409900 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
CHN1-205ENST00000409900 PPARGC1BQ86YN6 1023 aaKnown RBP26.26■■□□□ 1.79
CHN1-205ENST00000409900 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CHN1-205ENST00000409900 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
CHN1-205ENST00000409900 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
CHN1-205ENST00000409900 CFTRP13569 1480 aa26.16■■□□□ 1.78
CHN1-205ENST00000409900 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
CHN1-205ENST00000409900 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
CHN1-205ENST00000409900 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
CHN1-205ENST00000409900 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
CHN1-205ENST00000409900 TNIKQ9UKE5 1360 aa26.02■■□□□ 1.76
CHN1-205ENST00000409900 GOLGA3Q08378 1498 aa26.02■■□□□ 1.76
CHN1-205ENST00000409900 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
CHN1-205ENST00000409900 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
CHN1-205ENST00000409900 CEP162Q5TB80 1403 aa25.97■■□□□ 1.75
CHN1-205ENST00000409900 CUX1P39880 1505 aa25.97■■□□□ 1.75
CHN1-205ENST00000409900 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
CHN1-205ENST00000409900 KIF21BO75037 1637 aa25.95■■□□□ 1.74
CHN1-205ENST00000409900 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
CHN1-205ENST00000409900 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
CHN1-205ENST00000409900 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
CHN1-205ENST00000409900 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
CHN1-205ENST00000409900 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
CHN1-205ENST00000409900 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
CHN1-205ENST00000409900 PRXQ9BXM0 1461 aa25.67■■□□□ 1.7
CHN1-205ENST00000409900 CLIP1P30622 1438 aa25.64■■□□□ 1.7
CHN1-205ENST00000409900 NESP48681 1621 aa25.63■■□□□ 1.69
CHN1-205ENST00000409900 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
CHN1-205ENST00000409900 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
CHN1-205ENST00000409900 CUX2O14529 1486 aa25.57■■□□□ 1.68
CHN1-205ENST00000409900 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
CHN1-205ENST00000409900 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
CHN1-205ENST00000409900 VPS8Q8N3P4 1428 aa25.47■■□□□ 1.67
CHN1-205ENST00000409900 IGF1RP08069 1367 aa25.44■■□□□ 1.66
CHN1-205ENST00000409900 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
CHN1-205ENST00000409900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
CHN1-205ENST00000409900 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
CHN1-205ENST00000409900 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
CHN1-205ENST00000409900 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
CHN1-205ENST00000409900 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
CHN1-205ENST00000409900 CARMIL1Q5VZK9 1371 aa25.35■■□□□ 1.65
CHN1-205ENST00000409900 ZEB1P37275 1124 aaPredicted RBP25.34■■□□□ 1.65
CHN1-205ENST00000409900 APLP2Q06481 763 aa25.33■■□□□ 1.64
CHN1-205ENST00000409900 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
CHN1-205ENST00000409900 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
CHN1-205ENST00000409900 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
CHN1-205ENST00000409900 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
CHN1-205ENST00000409900 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
CHN1-205ENST00000409900 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
CHN1-205ENST00000409900 CUL7Q14999 1698 aa25.18■■□□□ 1.62
CHN1-205ENST00000409900 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
CHN1-205ENST00000409900 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
CHN1-205ENST00000409900 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
CHN1-205ENST00000409900 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
CHN1-205ENST00000409900 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
CHN1-205ENST00000409900 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
CHN1-205ENST00000409900 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
CHN1-205ENST00000409900 CTTNBP2Q8WZ74 1663 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms