RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
NR4A1-204ENST00000394825 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
NR4A1-204ENST00000394825 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
NR4A1-204ENST00000394825 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
NR4A1-204ENST00000394825 HRCP23327 699 aa27.48■■□□□ 1.99
NR4A1-204ENST00000394825 PELP1Q8IZL8 1130 aaKnown RBP27.4■■□□□ 1.98
NR4A1-204ENST00000394825 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
NR4A1-204ENST00000394825 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
NR4A1-204ENST00000394825 ABCC9O60706 1549 aa27.14■■□□□ 1.94
NR4A1-204ENST00000394825 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
NR4A1-204ENST00000394825 NACADO15069 1562 aa26.96■■□□□ 1.91
NR4A1-204ENST00000394825 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
NR4A1-204ENST00000394825 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
NR4A1-204ENST00000394825 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
NR4A1-204ENST00000394825 MYT1Q01538 1121 aa26.56■■□□□ 1.84
NR4A1-204ENST00000394825 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
NR4A1-204ENST00000394825 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
NR4A1-204ENST00000394825 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
NR4A1-204ENST00000394825 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
NR4A1-204ENST00000394825 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
NR4A1-204ENST00000394825 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.72
NR4A1-204ENST00000394825 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
NR4A1-204ENST00000394825 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
NR4A1-204ENST00000394825 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
NR4A1-204ENST00000394825 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.7
NR4A1-204ENST00000394825 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
NR4A1-204ENST00000394825 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.69
NR4A1-204ENST00000394825 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
NR4A1-204ENST00000394825 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
NR4A1-204ENST00000394825 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
NR4A1-204ENST00000394825 WIZO95785 1651 aa25.45■■□□□ 1.66
NR4A1-204ENST00000394825 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
NR4A1-204ENST00000394825 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
NR4A1-204ENST00000394825 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
NR4A1-204ENST00000394825 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
NR4A1-204ENST00000394825 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
NR4A1-204ENST00000394825 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
NR4A1-204ENST00000394825 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
NR4A1-204ENST00000394825 CENPBP07199 599 aaPredicted RBP25.07■■□□□ 1.6
NR4A1-204ENST00000394825 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
NR4A1-204ENST00000394825 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
NR4A1-204ENST00000394825 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
NR4A1-204ENST00000394825 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
NR4A1-204ENST00000394825 HMGXB3Q12766 1538 aa24.87■■□□□ 1.57
NR4A1-204ENST00000394825 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
NR4A1-204ENST00000394825 DIEXFQ68CQ4 756 aaKnown RBP24.7■■□□□ 1.54
NR4A1-204ENST00000394825 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
NR4A1-204ENST00000394825 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
NR4A1-204ENST00000394825 BCL11AQ9H165 835 aa24.5■■□□□ 1.51
NR4A1-204ENST00000394825 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
NR4A1-204ENST00000394825 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
NR4A1-204ENST00000394825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.35■■□□□ 1.49
NR4A1-204ENST00000394825 CFTRP13569 1480 aa24.33■■□□□ 1.48
NR4A1-204ENST00000394825 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
NR4A1-204ENST00000394825 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
NR4A1-204ENST00000394825 ANP32EQ9BTT0 268 aa24.28■■□□□ 1.48
NR4A1-204ENST00000394825 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
NR4A1-204ENST00000394825 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
NR4A1-204ENST00000394825 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
NR4A1-204ENST00000394825 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
NR4A1-204ENST00000394825 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.46
NR4A1-204ENST00000394825 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
NR4A1-204ENST00000394825 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
NR4A1-204ENST00000394825 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
NR4A1-204ENST00000394825 EEA1Q15075 1411 aa24.11■■□□□ 1.45
NR4A1-204ENST00000394825 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.43
NR4A1-204ENST00000394825 MIER1Q8N108 512 aa23.98■■□□□ 1.43
NR4A1-204ENST00000394825 CUX1P39880 1505 aa23.98■■□□□ 1.43
NR4A1-204ENST00000394825 SOGA1O94964 1423 aa23.98■■□□□ 1.43
NR4A1-204ENST00000394825 TSHZ2Q9NRE2 1034 aa23.94■■□□□ 1.42
NR4A1-204ENST00000394825 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
NR4A1-204ENST00000394825 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
NR4A1-204ENST00000394825 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
NR4A1-204ENST00000394825 NESP48681 1621 aa23.86■■□□□ 1.41
NR4A1-204ENST00000394825 RUSC2Q8N2Y8 1516 aa23.86■■□□□ 1.41
NR4A1-204ENST00000394825 PRKCSHP14314 528 aaPredicted RBP23.85■■□□□ 1.41
NR4A1-204ENST00000394825 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
NR4A1-204ENST00000394825 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
NR4A1-204ENST00000394825 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
NR4A1-204ENST00000394825 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
NR4A1-204ENST00000394825 KIF21BO75037 1637 aa23.77■■□□□ 1.4
NR4A1-204ENST00000394825 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
NR4A1-204ENST00000394825 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
NR4A1-204ENST00000394825 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
NR4A1-204ENST00000394825 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
NR4A1-204ENST00000394825 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
NR4A1-204ENST00000394825 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
NR4A1-204ENST00000394825 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
NR4A1-204ENST00000394825 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
NR4A1-204ENST00000394825 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
NR4A1-204ENST00000394825 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
NR4A1-204ENST00000394825 CUX2O14529 1486 aa23.56■■□□□ 1.36
NR4A1-204ENST00000394825 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
NR4A1-204ENST00000394825 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
NR4A1-204ENST00000394825 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
NR4A1-204ENST00000394825 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
NR4A1-204ENST00000394825 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
NR4A1-204ENST00000394825 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
NR4A1-204ENST00000394825 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
NR4A1-204ENST00000394825 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms