RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
LSP1-204ENST00000406638 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
LSP1-204ENST00000406638 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
LSP1-204ENST00000406638 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
LSP1-204ENST00000406638 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
LSP1-204ENST00000406638 ABCC9O60706 1549 aa28.43■■■□□ 2.14
LSP1-204ENST00000406638 DCAF1Q9Y4B6 1507 aa28.19■■■□□ 2.1
LSP1-204ENST00000406638 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
LSP1-204ENST00000406638 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
LSP1-204ENST00000406638 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
LSP1-204ENST00000406638 NACADO15069 1562 aa27.65■■■□□ 2.02
LSP1-204ENST00000406638 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
LSP1-204ENST00000406638 HRCP23327 699 aa27.27■■□□□ 1.96
LSP1-204ENST00000406638 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
LSP1-204ENST00000406638 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
LSP1-204ENST00000406638 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
LSP1-204ENST00000406638 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
LSP1-204ENST00000406638 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
LSP1-204ENST00000406638 PCGF6Q9BYE7 350 aa26.8■■□□□ 1.88
LSP1-204ENST00000406638 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
LSP1-204ENST00000406638 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
LSP1-204ENST00000406638 WIZO95785 1651 aa26.56■■□□□ 1.84
LSP1-204ENST00000406638 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
LSP1-204ENST00000406638 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
LSP1-204ENST00000406638 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
LSP1-204ENST00000406638 PELP1Q8IZL8 1130 aaKnown RBP26.25■■□□□ 1.79
LSP1-204ENST00000406638 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
LSP1-204ENST00000406638 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
LSP1-204ENST00000406638 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
LSP1-204ENST00000406638 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
LSP1-204ENST00000406638 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
LSP1-204ENST00000406638 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
LSP1-204ENST00000406638 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
LSP1-204ENST00000406638 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
LSP1-204ENST00000406638 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
LSP1-204ENST00000406638 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
LSP1-204ENST00000406638 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.72
LSP1-204ENST00000406638 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
LSP1-204ENST00000406638 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
LSP1-204ENST00000406638 NCAPD3P42695 1498 aa25.63■■□□□ 1.69
LSP1-204ENST00000406638 ZEB1P37275 1124 aaPredicted RBP25.56■■□□□ 1.68
LSP1-204ENST00000406638 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
LSP1-204ENST00000406638 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
LSP1-204ENST00000406638 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
LSP1-204ENST00000406638 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
LSP1-204ENST00000406638 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
LSP1-204ENST00000406638 SOGA1O94964 1423 aa25.23■■□□□ 1.63
LSP1-204ENST00000406638 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
LSP1-204ENST00000406638 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
LSP1-204ENST00000406638 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
LSP1-204ENST00000406638 MYT1Q01538 1121 aa25.17■■□□□ 1.62
LSP1-204ENST00000406638 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
LSP1-204ENST00000406638 CFTRP13569 1480 aa25.17■■□□□ 1.62
LSP1-204ENST00000406638 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
LSP1-204ENST00000406638 NESP48681 1621 aa25.06■■□□□ 1.6
LSP1-204ENST00000406638 GTF3C3Q9Y5Q9 886 aa25.04■■□□□ 1.6
LSP1-204ENST00000406638 CUX1P39880 1505 aa24.98■■□□□ 1.59
LSP1-204ENST00000406638 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
LSP1-204ENST00000406638 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
LSP1-204ENST00000406638 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
LSP1-204ENST00000406638 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
LSP1-204ENST00000406638 CENPBP07199 599 aaPredicted RBP24.83■■□□□ 1.57
LSP1-204ENST00000406638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
LSP1-204ENST00000406638 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
LSP1-204ENST00000406638 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
LSP1-204ENST00000406638 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
LSP1-204ENST00000406638 EEA1Q15075 1411 aa24.76■■□□□ 1.55
LSP1-204ENST00000406638 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
LSP1-204ENST00000406638 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
LSP1-204ENST00000406638 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
LSP1-204ENST00000406638 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.53
LSP1-204ENST00000406638 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.53
LSP1-204ENST00000406638 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
LSP1-204ENST00000406638 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
LSP1-204ENST00000406638 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
LSP1-204ENST00000406638 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
LSP1-204ENST00000406638 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
LSP1-204ENST00000406638 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
LSP1-204ENST00000406638 CUX2O14529 1486 aa24.58■■□□□ 1.53
LSP1-204ENST00000406638 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.52
LSP1-204ENST00000406638 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
LSP1-204ENST00000406638 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
LSP1-204ENST00000406638 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
LSP1-204ENST00000406638 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
LSP1-204ENST00000406638 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
LSP1-204ENST00000406638 KIF21BO75037 1637 aa24.51■■□□□ 1.51
LSP1-204ENST00000406638 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
LSP1-204ENST00000406638 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
LSP1-204ENST00000406638 IGF1RP08069 1367 aa24.45■■□□□ 1.5
LSP1-204ENST00000406638 TTBK1Q5TCY1 1321 aaPredicted RBP24.44■■□□□ 1.5
LSP1-204ENST00000406638 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
LSP1-204ENST00000406638 CLIP1P30622 1438 aa24.33■■□□□ 1.49
LSP1-204ENST00000406638 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
LSP1-204ENST00000406638 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
LSP1-204ENST00000406638 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
LSP1-204ENST00000406638 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
LSP1-204ENST00000406638 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
LSP1-204ENST00000406638 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
LSP1-204ENST00000406638 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
LSP1-204ENST00000406638 MIER1Q8N108 512 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms