RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
C19orf54-201ENST00000378313 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
C19orf54-201ENST00000378313 HRCP23327 699 aa26.97■■□□□ 1.91
C19orf54-201ENST00000378313 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
C19orf54-201ENST00000378313 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
C19orf54-201ENST00000378313 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
C19orf54-201ENST00000378313 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
C19orf54-201ENST00000378313 CCDC180Q9P1Z9 1646 aa26.51■■□□□ 1.84
C19orf54-201ENST00000378313 PCGF6Q9BYE7 350 aa26.4■■□□□ 1.82
C19orf54-201ENST00000378313 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
C19orf54-201ENST00000378313 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
C19orf54-201ENST00000378313 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
C19orf54-201ENST00000378313 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
C19orf54-201ENST00000378313 LOC105371045A0A1W2PR82 267 aa25.78■■□□□ 1.72
C19orf54-201ENST00000378313 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
C19orf54-201ENST00000378313 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
C19orf54-201ENST00000378313 ABCC9O60706 1549 aa25.4■■□□□ 1.66
C19orf54-201ENST00000378313 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
C19orf54-201ENST00000378313 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
C19orf54-201ENST00000378313 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
C19orf54-201ENST00000378313 MYT1Q01538 1121 aa25.08■■□□□ 1.61
C19orf54-201ENST00000378313 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
C19orf54-201ENST00000378313 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
C19orf54-201ENST00000378313 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
C19orf54-201ENST00000378313 ACIN1Q9UKV3 1341 aaKnown RBP24.8■■□□□ 1.56
C19orf54-201ENST00000378313 NEUROD1Q13562 356 aa24.64■■□□□ 1.54
C19orf54-201ENST00000378313 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
C19orf54-201ENST00000378313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
C19orf54-201ENST00000378313 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
C19orf54-201ENST00000378313 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
C19orf54-201ENST00000378313 DIEXFQ68CQ4 756 aaKnown RBP24.52■■□□□ 1.52
C19orf54-201ENST00000378313 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
C19orf54-201ENST00000378313 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
C19orf54-201ENST00000378313 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.51
C19orf54-201ENST00000378313 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
C19orf54-201ENST00000378313 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
C19orf54-201ENST00000378313 WIZO95785 1651 aa24.37■■□□□ 1.49
C19orf54-201ENST00000378313 NACADO15069 1562 aa24.34■■□□□ 1.49
C19orf54-201ENST00000378313 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
C19orf54-201ENST00000378313 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
C19orf54-201ENST00000378313 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
C19orf54-201ENST00000378313 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
C19orf54-201ENST00000378313 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.44
C19orf54-201ENST00000378313 EEA1Q15075 1411 aa24.07■■□□□ 1.44
C19orf54-201ENST00000378313 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
C19orf54-201ENST00000378313 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
C19orf54-201ENST00000378313 SOGA1O94964 1423 aa23.95■■□□□ 1.42
C19orf54-201ENST00000378313 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
C19orf54-201ENST00000378313 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
C19orf54-201ENST00000378313 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
C19orf54-201ENST00000378313 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
C19orf54-201ENST00000378313 MIER1Q8N108 512 aa23.88■■□□□ 1.41
C19orf54-201ENST00000378313 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
C19orf54-201ENST00000378313 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
C19orf54-201ENST00000378313 UBTFP17480 764 aaKnown RBP23.8■■□□□ 1.4
C19orf54-201ENST00000378313 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
C19orf54-201ENST00000378313 CLSPNQ9HAW4 1339 aa23.73■■□□□ 1.39
C19orf54-201ENST00000378313 KIF21BO75037 1637 aa23.69■■□□□ 1.38
C19orf54-201ENST00000378313 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
C19orf54-201ENST00000378313 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
C19orf54-201ENST00000378313 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
C19orf54-201ENST00000378313 CLIP1P30622 1438 aa23.6■■□□□ 1.37
C19orf54-201ENST00000378313 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
C19orf54-201ENST00000378313 APLP2Q06481 763 aa23.46■■□□□ 1.35
C19orf54-201ENST00000378313 SYNJ1O43426 1573 aa23.45■■□□□ 1.35
C19orf54-201ENST00000378313 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.34
C19orf54-201ENST00000378313 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
C19orf54-201ENST00000378313 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
C19orf54-201ENST00000378313 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
C19orf54-201ENST00000378313 RAPGEF2Q9Y4G8 1499 aa23.35■■□□□ 1.33
C19orf54-201ENST00000378313 ANP32EQ9BTT0 268 aa23.27■■□□□ 1.32
C19orf54-201ENST00000378313 BCL11AQ9H165 835 aa23.26■■□□□ 1.31
C19orf54-201ENST00000378313 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
C19orf54-201ENST00000378313 CUX2O14529 1486 aa23.22■■□□□ 1.31
C19orf54-201ENST00000378313 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
C19orf54-201ENST00000378313 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
C19orf54-201ENST00000378313 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
C19orf54-201ENST00000378313 ARAP1Q96P48 1450 aa23.16■■□□□ 1.3
C19orf54-201ENST00000378313 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
C19orf54-201ENST00000378313 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
C19orf54-201ENST00000378313 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
C19orf54-201ENST00000378313 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
C19orf54-201ENST00000378313 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
C19orf54-201ENST00000378313 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
C19orf54-201ENST00000378313 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
C19orf54-201ENST00000378313 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
C19orf54-201ENST00000378313 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
C19orf54-201ENST00000378313 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
C19orf54-201ENST00000378313 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
C19orf54-201ENST00000378313 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
C19orf54-201ENST00000378313 FKBP8Q14318 412 aa22.84■■□□□ 1.25
C19orf54-201ENST00000378313 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
C19orf54-201ENST00000378313 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
C19orf54-201ENST00000378313 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
C19orf54-201ENST00000378313 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
C19orf54-201ENST00000378313 BCANQ96GW7 911 aa22.78■■□□□ 1.24
C19orf54-201ENST00000378313 CCER2I3L3R5 266 aa22.77■■□□□ 1.24
C19orf54-201ENST00000378313 WDR97A6NE52 1622 aa22.77■■□□□ 1.23
C19orf54-201ENST00000378313 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
C19orf54-201ENST00000378313 NEFLP07196 543 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms