RNA–Protein interactions for RNA: ENST00000402191.5

EFR3B-203, Transcript of EFR3 homolog B, humanhuman

TSL 5 BASIC

Gene EFR3B, Length 3,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-203ENST00000402191 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
EFR3B-203ENST00000402191 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
EFR3B-203ENST00000402191 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
EFR3B-203ENST00000402191 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
EFR3B-203ENST00000402191 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
EFR3B-203ENST00000402191 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
EFR3B-203ENST00000402191 FAM9AQ8IZU1 332 aaPredicted RBP26.39■■□□□ 1.82
EFR3B-203ENST00000402191 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
EFR3B-203ENST00000402191 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
EFR3B-203ENST00000402191 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
EFR3B-203ENST00000402191 HRCP23327 699 aa25.93■■□□□ 1.74
EFR3B-203ENST00000402191 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
EFR3B-203ENST00000402191 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
EFR3B-203ENST00000402191 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
EFR3B-203ENST00000402191 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
EFR3B-203ENST00000402191 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
EFR3B-203ENST00000402191 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
EFR3B-203ENST00000402191 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
EFR3B-203ENST00000402191 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.6
EFR3B-203ENST00000402191 ABCC9O60706 1549 aa25.07■■□□□ 1.6
EFR3B-203ENST00000402191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
EFR3B-203ENST00000402191 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
EFR3B-203ENST00000402191 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
EFR3B-203ENST00000402191 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
EFR3B-203ENST00000402191 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
EFR3B-203ENST00000402191 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
EFR3B-203ENST00000402191 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
EFR3B-203ENST00000402191 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
EFR3B-203ENST00000402191 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.53
EFR3B-203ENST00000402191 APLP2Q06481 763 aa24.52■■□□□ 1.52
EFR3B-203ENST00000402191 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
EFR3B-203ENST00000402191 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
EFR3B-203ENST00000402191 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
EFR3B-203ENST00000402191 ITGAEP38570 1179 aa24.26■■□□□ 1.47
EFR3B-203ENST00000402191 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
EFR3B-203ENST00000402191 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
EFR3B-203ENST00000402191 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
EFR3B-203ENST00000402191 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
EFR3B-203ENST00000402191 GTF3C3Q9Y5Q9 886 aa24.11■■□□□ 1.45
EFR3B-203ENST00000402191 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
EFR3B-203ENST00000402191 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
EFR3B-203ENST00000402191 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
EFR3B-203ENST00000402191 SOGA1O94964 1423 aa23.86■■□□□ 1.41
EFR3B-203ENST00000402191 WIZO95785 1651 aa23.85■■□□□ 1.41
EFR3B-203ENST00000402191 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
EFR3B-203ENST00000402191 NACADO15069 1562 aa23.83■■□□□ 1.4
EFR3B-203ENST00000402191 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
EFR3B-203ENST00000402191 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
EFR3B-203ENST00000402191 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
EFR3B-203ENST00000402191 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
EFR3B-203ENST00000402191 MIER1Q8N108 512 aa23.69■■□□□ 1.38
EFR3B-203ENST00000402191 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
EFR3B-203ENST00000402191 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
EFR3B-203ENST00000402191 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
EFR3B-203ENST00000402191 BCANQ96GW7 911 aa23.46■■□□□ 1.35
EFR3B-203ENST00000402191 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.35
EFR3B-203ENST00000402191 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
EFR3B-203ENST00000402191 CLIP1P30622 1438 aa23.45■■□□□ 1.34
EFR3B-203ENST00000402191 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
EFR3B-203ENST00000402191 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
EFR3B-203ENST00000402191 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
EFR3B-203ENST00000402191 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
EFR3B-203ENST00000402191 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
EFR3B-203ENST00000402191 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
EFR3B-203ENST00000402191 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
EFR3B-203ENST00000402191 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.29
EFR3B-203ENST00000402191 POLR3GLQ9BT43 218 aa23.11■■□□□ 1.29
EFR3B-203ENST00000402191 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
EFR3B-203ENST00000402191 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
EFR3B-203ENST00000402191 EEA1Q15075 1411 aa23.09■■□□□ 1.29
EFR3B-203ENST00000402191 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
EFR3B-203ENST00000402191 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.29
EFR3B-203ENST00000402191 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
EFR3B-203ENST00000402191 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
EFR3B-203ENST00000402191 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
EFR3B-203ENST00000402191 NEFLP07196 543 aa23.02■■□□□ 1.28
EFR3B-203ENST00000402191 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
EFR3B-203ENST00000402191 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
EFR3B-203ENST00000402191 CHIC2Q9UKJ5 165 aa22.94■■□□□ 1.26
EFR3B-203ENST00000402191 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
EFR3B-203ENST00000402191 FKBP8Q14318 412 aa22.91■■□□□ 1.26
EFR3B-203ENST00000402191 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
EFR3B-203ENST00000402191 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
EFR3B-203ENST00000402191 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.24
EFR3B-203ENST00000402191 IRX6P78412 446 aaPredicted RBP22.82■■□□□ 1.24
EFR3B-203ENST00000402191 ANP32CO43423 234 aa22.8■■□□□ 1.24
EFR3B-203ENST00000402191 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
EFR3B-203ENST00000402191 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
EFR3B-203ENST00000402191 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
EFR3B-203ENST00000402191 SUPT16HQ9Y5B9 1047 aaKnown RBP22.75■■□□□ 1.23
EFR3B-203ENST00000402191 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
EFR3B-203ENST00000402191 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
EFR3B-203ENST00000402191 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
EFR3B-203ENST00000402191 CUX2O14529 1486 aa22.68■■□□□ 1.22
EFR3B-203ENST00000402191 FBLN2P98095 1184 aa22.66■■□□□ 1.22
EFR3B-203ENST00000402191 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.22
EFR3B-203ENST00000402191 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
EFR3B-203ENST00000402191 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
EFR3B-203ENST00000402191 ERICH6Q7L0X2 663 aa22.62■■□□□ 1.21
EFR3B-203ENST00000402191 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms